RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 EEF1GP26641 437 aaKnown RBP10.22□□□□□ -0.77
ATG4A-202ENST00000345734 PPP1R2P41236 205 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 SETQ01105 290 aaPredicted RBP10.22□□□□□ -0.77
ATG4A-202ENST00000345734 UBXN1Q04323 297 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 HERC4Q5GLZ8 1057 aaPredicted RBP10.22□□□□□ -0.77
ATG4A-202ENST00000345734 FAM26FQ5R3K3 315 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 NSMFQ6X4W1 530 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 RNF207Q6ZRF8 634 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 CATSPERGQ6ZRH7 1159 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 TPH2Q8IWU9 490 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 CCDC65Q8IXS2 484 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 SYT2Q8N9I0 419 aaPredicted RBP10.22□□□□□ -0.77
ATG4A-202ENST00000345734 PIGOQ8TEQ8 1089 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 NOC3LQ8WTT2 800 aaKnown RBP10.22□□□□□ -0.77
ATG4A-202ENST00000345734 CNOT6LQ96LI5 555 aaKnown RBP10.22□□□□□ -0.77
ATG4A-202ENST00000345734 HINFPQ9BQA5 517 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 RUSC1Q9BVN2 902 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 BHMT2Q9H2M3 363 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 ZHX3Q9H4I2 956 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 BCAS3Q9H6U6 928 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 POLD4Q9HCU8 107 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 KCNH7Q9NS40 1196 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 TMOD4Q9NZQ9 345 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 MAGEC2Q9UBF1 373 aaPredicted RBP10.22□□□□□ -0.77
ATG4A-202ENST00000345734 PCDHGA11Q9Y5H2 935 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 PAPPA2Q9BXP8 1791 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 FRMPD4Q14CM0 1322 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 FRMD3A2A2Y4 597 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 RNF223E7ERA6 249 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 CLGNO14967 610 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 MYCLP12524 364 aaPredicted RBP10.22□□□□□ -0.77
ATG4A-202ENST00000345734 TRIM32Q13049 653 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 BAATQ14032 418 aaPredicted RBP10.22□□□□□ -0.77
ATG4A-202ENST00000345734 GIT2Q14161 759 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 COG2Q14746 738 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 TMEM132BQ14DG7 1078 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 TKFCQ3LXA3 575 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 PCNX4Q63HM2 1172 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 SNRNP48Q6IEG0 339 aaKnown RBP10.22□□□□□ -0.77
ATG4A-202ENST00000345734 B3GNT9Q6UX72 402 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 MYOCDQ8IZQ8 938 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 SIX5Q8N196 739 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 TSEN2Q8NCE0 465 aaKnown RBP10.22□□□□□ -0.77
ATG4A-202ENST00000345734 CCDC112Q8NEF3 446 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 REEP2Q9BRK0 252 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 WRAP73Q9P2S5 460 aaPredicted RBP10.22□□□□□ -0.77
ATG4A-202ENST00000345734 ZNF214Q9UL59 606 aaPredicted RBP10.22□□□□□ -0.77
ATG4A-202ENST00000345734 ADAMTS5Q9UNA0 930 aa10.22□□□□□ -0.77
ATG4A-202ENST00000345734 MYH11P35749 1972 aa10.21□□□□□ -0.77
ATG4A-202ENST00000345734 ITIH6Q6UXX5 1313 aa10.21□□□□□ -0.77
ATG4A-202ENST00000345734 LGALS16A8MUM7 142 aa10.21□□□□□ -0.77
ATG4A-202ENST00000345734 RSPH10B2B2RC85 870 aa10.21□□□□□ -0.77
ATG4A-202ENST00000345734 B4DLN1 442 aa10.21□□□□□ -0.77
ATG4A-202ENST00000345734 AKR1B15C9JRZ8 316 aaPredicted RBP10.21□□□□□ -0.77
ATG4A-202ENST00000345734 RNF225M0QZC1 329 aaPredicted RBP10.21□□□□□ -0.77
ATG4A-202ENST00000345734 PES1O00541 588 aaKnown RBP10.21□□□□□ -0.77
ATG4A-202ENST00000345734 NRDCO43847 1150 aa10.21□□□□□ -0.77
ATG4A-202ENST00000345734 EYA4O95677 639 aa10.21□□□□□ -0.77
ATG4A-202ENST00000345734 GYPCP04921 128 aa10.21□□□□□ -0.77
ATG4A-202ENST00000345734 RSPH10BP0C881 870 aa10.21□□□□□ -0.77
ATG4A-202ENST00000345734 CASP14P31944 242 aa10.21□□□□□ -0.77
ATG4A-202ENST00000345734 SEC13P55735 322 aa10.21□□□□□ -0.77
ATG4A-202ENST00000345734 SKOR1P84550 965 aa10.21□□□□□ -0.77
ATG4A-202ENST00000345734 ITGB3BPQ13352 177 aaPredicted RBP10.21□□□□□ -0.77
ATG4A-202ENST00000345734 PGM5Q15124 567 aa10.21□□□□□ -0.77
ATG4A-202ENST00000345734 KRT26Q7Z3Y9 468 aa10.21□□□□□ -0.77
ATG4A-202ENST00000345734 PPFIBP1Q86W92 1011 aa10.21□□□□□ -0.77
ATG4A-202ENST00000345734 ZNF507Q8TCN5 953 aa10.21□□□□□ -0.77
ATG4A-202ENST00000345734 KCTD15Q96SI1 283 aaPredicted RBP10.21□□□□□ -0.77
ATG4A-202ENST00000345734 RMDN3Q96TC7 470 aa10.21□□□□□ -0.77
ATG4A-202ENST00000345734 BAG1Q99933 345 aaPredicted RBP10.21□□□□□ -0.77
ATG4A-202ENST00000345734 TUBGCP2Q9BSJ2 902 aa10.21□□□□□ -0.77
ATG4A-202ENST00000345734 CCDC94Q9BW85 323 aaPredicted RBP10.21□□□□□ -0.77
ATG4A-202ENST00000345734 TEKT3Q9BXF9 490 aa10.21□□□□□ -0.77
ATG4A-202ENST00000345734 AGO4Q9HCK5 861 aaKnown RBP10.21□□□□□ -0.77
ATG4A-202ENST00000345734 TUFT1Q9NNX1 390 aa10.21□□□□□ -0.77
ATG4A-202ENST00000345734 PXMP2Q9NR77 195 aa10.21□□□□□ -0.77
ATG4A-202ENST00000345734 KCND1Q9NSA2 647 aa10.21□□□□□ -0.77
ATG4A-202ENST00000345734 RABGAP1Q9Y3P9 1069 aa10.21□□□□□ -0.77
ATG4A-202ENST00000345734 UBIAD1Q9Y5Z9 338 aa10.21□□□□□ -0.77
ATG4A-202ENST00000345734 DYNC1I1O14576 645 aa10.21□□□□□ -0.78
ATG4A-202ENST00000345734 DHX15O43143 795 aaKnown RBP10.21□□□□□ -0.78
ATG4A-202ENST00000345734 ZBTB24O43167 697 aaPredicted RBP10.21□□□□□ -0.78
ATG4A-202ENST00000345734 PEX10O60683 326 aa10.21□□□□□ -0.78
ATG4A-202ENST00000345734 ABL1P00519 1130 aa10.21□□□□□ -0.78
ATG4A-202ENST00000345734 TNNT1P13805 278 aa10.21□□□□□ -0.78
ATG4A-202ENST00000345734 MTIF2P46199 727 aaKnown RBP10.21□□□□□ -0.78
ATG4A-202ENST00000345734 FXR1P51114 621 aaKnown RBP eCLIP10.21□□□□□ -0.78
ATG4A-202ENST00000345734 TREML2Q5T2D2 321 aa10.21□□□□□ -0.78
ATG4A-202ENST00000345734 CAPN12Q6ZSI9 719 aa10.21□□□□□ -0.78
ATG4A-202ENST00000345734 MOB2Q70IA6 237 aa10.21□□□□□ -0.78
ATG4A-202ENST00000345734 NELFCDQ8IXH7 590 aa10.21□□□□□ -0.78
ATG4A-202ENST00000345734 MB21D1Q8N884 522 aa10.21□□□□□ -0.78
ATG4A-202ENST00000345734 SCFD1Q8WVM8 642 aa10.21□□□□□ -0.78
ATG4A-202ENST00000345734 PPP1R13BQ96KQ4 1090 aa10.21□□□□□ -0.78
ATG4A-202ENST00000345734 C1QTNF2Q9BXJ5 285 aa10.21□□□□□ -0.78
ATG4A-202ENST00000345734 JADE2Q9NQC1 790 aa10.21□□□□□ -0.78
ATG4A-202ENST00000345734 MAP3K20Q9NYL2 800 aaKnown RBP10.21□□□□□ -0.78
ATG4A-202ENST00000345734 DOCK5Q9H7D0 1870 aa10.2□□□□□ -0.78
ATG4A-202ENST00000345734 LCTP09848 1927 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms