RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 ODR4Q5SWX8 454 aa14.61□□□□□ -0.07
HLA-DQA1-201ENST00000343139 FAM109BQ6ICB4 259 aaPredicted RBP14.61□□□□□ -0.07
HLA-DQA1-201ENST00000343139 FERMT3Q86UX7 667 aa14.61□□□□□ -0.07
HLA-DQA1-201ENST00000343139 AK8Q96MA6 479 aa14.61□□□□□ -0.07
HLA-DQA1-201ENST00000343139 NACC1Q96RE7 527 aa14.61□□□□□ -0.07
HLA-DQA1-201ENST00000343139 FTHL17Q9BXU8 183 aa14.61□□□□□ -0.07
HLA-DQA1-201ENST00000343139 FOXD4L1Q9NU39 408 aa14.61□□□□□ -0.07
HLA-DQA1-201ENST00000343139 SOX1O00570 391 aaPredicted RBP14.6□□□□□ -0.07
HLA-DQA1-201ENST00000343139 NPEPPSP55786 919 aa14.6□□□□□ -0.07
HLA-DQA1-201ENST00000343139 WDR5P61964 334 aaKnown RBP14.6□□□□□ -0.07
HLA-DQA1-201ENST00000343139 IL17AQ16552 155 aa14.6□□□□□ -0.07
HLA-DQA1-201ENST00000343139 ADAMTS10Q9H324 1103 aa14.6□□□□□ -0.07
HLA-DQA1-201ENST00000343139 TRIP12Q14669 1992 aaPredicted RBP14.6□□□□□ -0.07
HLA-DQA1-201ENST00000343139 TMEM150BA6NC51 233 aa14.6□□□□□ -0.07
HLA-DQA1-201ENST00000343139 ZBBXA8MT70 800 aa14.6□□□□□ -0.07
HLA-DQA1-201ENST00000343139 MED24O75448 989 aa14.6□□□□□ -0.07
HLA-DQA1-201ENST00000343139 DGAT1O75907 488 aa14.6□□□□□ -0.07
HLA-DQA1-201ENST00000343139 GHRP10912 638 aa14.6□□□□□ -0.07
HLA-DQA1-201ENST00000343139 ATP2A2P16615 1042 aaKnown RBP14.6□□□□□ -0.07
HLA-DQA1-201ENST00000343139 KCNJ6P48051 423 aa14.6□□□□□ -0.07
HLA-DQA1-201ENST00000343139 RARRES1P49788 294 aa14.6□□□□□ -0.07
HLA-DQA1-201ENST00000343139 CLCN3P51790 818 aa14.6□□□□□ -0.07
HLA-DQA1-201ENST00000343139 POLGP54098 1239 aaPredicted RBP14.6□□□□□ -0.07
HLA-DQA1-201ENST00000343139 BECN1Q14457 450 aa14.6□□□□□ -0.07
HLA-DQA1-201ENST00000343139 XKR9Q5GH70 373 aa14.6□□□□□ -0.07
HLA-DQA1-201ENST00000343139 KRT79Q5XKE5 535 aa14.6□□□□□ -0.07
HLA-DQA1-201ENST00000343139 PLA2G4FQ68DD2 849 aa14.6□□□□□ -0.07
HLA-DQA1-201ENST00000343139 ZNF410Q86VK4 478 aa14.6□□□□□ -0.07
HLA-DQA1-201ENST00000343139 LRRC71Q8N4P6 559 aa14.6□□□□□ -0.07
HLA-DQA1-201ENST00000343139 TCP11Q8WWU5 503 aa14.6□□□□□ -0.07
HLA-DQA1-201ENST00000343139 SUGCTQ9HAC7 445 aa14.6□□□□□ -0.07
HLA-DQA1-201ENST00000343139 AKT3Q9Y243 479 aa14.6□□□□□ -0.07
HLA-DQA1-201ENST00000343139 KAT6AQ92794 2004 aa14.59□□□□□ -0.07
HLA-DQA1-201ENST00000343139 MYH9P35579 1960 aaKnown RBP14.59□□□□□ -0.07
HLA-DQA1-201ENST00000343139 ASAP2O43150 1006 aa14.59□□□□□ -0.07
HLA-DQA1-201ENST00000343139 GPC3P51654 580 aa14.59□□□□□ -0.07
HLA-DQA1-201ENST00000343139 SF3A1Q15459 793 aaKnown RBP14.59□□□□□ -0.07
HLA-DQA1-201ENST00000343139 RAB30Q15771 203 aa14.59□□□□□ -0.07
HLA-DQA1-201ENST00000343139 TCTN1Q2MV58 587 aa14.59□□□□□ -0.07
HLA-DQA1-201ENST00000343139 HYIQ5T013 277 aa14.59□□□□□ -0.07
HLA-DQA1-201ENST00000343139 OSBPL7Q9BZF2 842 aa14.59□□□□□ -0.07
HLA-DQA1-201ENST00000343139 AGO3Q9H9G7 860 aaKnown RBP14.59□□□□□ -0.07
HLA-DQA1-201ENST00000343139 ZBTB39O15060 712 aa14.58□□□□□ -0.08
HLA-DQA1-201ENST00000343139 GPR182O15218 404 aa14.58□□□□□ -0.08
HLA-DQA1-201ENST00000343139 VTNP04004 478 aa14.58□□□□□ -0.08
HLA-DQA1-201ENST00000343139 EIF4BP23588 611 aaKnown RBP14.58□□□□□ -0.08
HLA-DQA1-201ENST00000343139 LONP1P36776 959 aaKnown RBP14.58□□□□□ -0.08
HLA-DQA1-201ENST00000343139 CCT6AP40227 531 aaKnown RBP14.58□□□□□ -0.08
HLA-DQA1-201ENST00000343139 NLRP11P59045 1033 aaKnown RBP14.58□□□□□ -0.08
HLA-DQA1-201ENST00000343139 POU5F1BQ06416 359 aa14.58□□□□□ -0.08
HLA-DQA1-201ENST00000343139 TMEM62Q0P6H9 643 aa14.58□□□□□ -0.08
HLA-DQA1-201ENST00000343139 PAK2Q13177 524 aa14.58□□□□□ -0.08
HLA-DQA1-201ENST00000343139 EMC2Q15006 297 aa14.58□□□□□ -0.08
HLA-DQA1-201ENST00000343139 PTPAQ15257 358 aa14.58□□□□□ -0.08
HLA-DQA1-201ENST00000343139 KIZQ2M2Z5 673 aa14.58□□□□□ -0.08
HLA-DQA1-201ENST00000343139 ZNF579Q8NAF0 562 aaKnown RBP14.58□□□□□ -0.08
HLA-DQA1-201ENST00000343139 SNX29Q8TEQ0 813 aa14.58□□□□□ -0.08
HLA-DQA1-201ENST00000343139 LRCH3Q96II8 777 aa14.58□□□□□ -0.08
HLA-DQA1-201ENST00000343139 SUCLA2Q9P2R7 463 aaPredicted RBP14.58□□□□□ -0.08
HLA-DQA1-201ENST00000343139 PADI3Q9ULW8 664 aa14.58□□□□□ -0.08
HLA-DQA1-201ENST00000343139 PCDHA11Q9Y5I1 949 aa14.58□□□□□ -0.08
HLA-DQA1-201ENST00000343139 RPS6KA5O75582 802 aa14.57□□□□□ -0.08
HLA-DQA1-201ENST00000343139 AMHP03971 560 aa14.57□□□□□ -0.08
HLA-DQA1-201ENST00000343139 ZSCAN22P10073 491 aaPredicted RBP14.57□□□□□ -0.08
HLA-DQA1-201ENST00000343139 MXD4Q14582 209 aaPredicted RBP14.57□□□□□ -0.08
HLA-DQA1-201ENST00000343139 ATL3Q6DD88 541 aa14.57□□□□□ -0.08
HLA-DQA1-201ENST00000343139 HERC6Q8IVU3 1022 aa14.57□□□□□ -0.08
HLA-DQA1-201ENST00000343139 PIGOQ8TEQ8 1089 aa14.57□□□□□ -0.08
HLA-DQA1-201ENST00000343139 TMEM40Q8WWA1 233 aa14.57□□□□□ -0.08
HLA-DQA1-201ENST00000343139 PSPC1Q8WXF1 523 aaKnown RBP14.57□□□□□ -0.08
HLA-DQA1-201ENST00000343139 CCDC43Q96MW1 224 aaKnown RBP14.57□□□□□ -0.08
HLA-DQA1-201ENST00000343139 MTRQ99707 1265 aa14.57□□□□□ -0.08
HLA-DQA1-201ENST00000343139 SH2D3AQ9BRG2 576 aa14.57□□□□□ -0.08
HLA-DQA1-201ENST00000343139 PBX4Q9BYU1 374 aa14.57□□□□□ -0.08
HLA-DQA1-201ENST00000343139 INO80BQ9C086 356 aaPredicted RBP14.57□□□□□ -0.08
HLA-DQA1-201ENST00000343139 NT5C3AQ9H0P0 336 aa14.57□□□□□ -0.08
HLA-DQA1-201ENST00000343139 CDHR5Q9HBB8 845 aa14.57□□□□□ -0.08
HLA-DQA1-201ENST00000343139 ATP6V0A4Q9HBG4 840 aa14.57□□□□□ -0.08
HLA-DQA1-201ENST00000343139 ERVK-5Q9HDB9 667 aa14.57□□□□□ -0.08
HLA-DQA1-201ENST00000343139 VWA3AA6NCI4 1184 aa14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 DARSP14868 501 aaKnown RBP14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 DNAJB2P25686 324 aa14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 CD52P31358 61 aa14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 NASPP49321 788 aaPredicted RBP14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 DRP2Q13474 957 aa14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 PCBP1Q15365 356 aaKnown RBP eCLIP14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 POTEGQ6S5H5 508 aa14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 MCPH1Q8NEM0 835 aa14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 TOP1MTQ969P6 601 aa14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 OSMRQ99650 979 aa14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 MMTAG2Q9BU76 263 aaKnown RBP14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 TSPYL2Q9H2G4 693 aaPredicted RBP14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 XPNPEP1Q9NQW7 623 aa14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 MSRAQ9UJ68 235 aa14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 NOC2LQ9Y3T9 749 aaKnown RBP14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 COL4A3BPQ9Y5P4 624 aa14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 SCN5AQ14524 2016 aa14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 ENPP3O14638 875 aa14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 GJB5O95377 273 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms