RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 TOGARAM2Q6ZUX3 1019 aa16.31■□□□□ 0.2
COL11A2-201ENST00000341947 VSTM4Q8IW00 320 aa16.31■□□□□ 0.2
COL11A2-201ENST00000341947 FBXO41Q8TF61 875 aa16.31■□□□□ 0.2
COL11A2-201ENST00000341947 SCG3Q8WXD2 468 aaKnown RBP16.31■□□□□ 0.2
COL11A2-201ENST00000341947 TRIM4Q9C037 500 aa16.31■□□□□ 0.2
COL11A2-201ENST00000341947 UPF3AQ9H1J1 476 aaKnown RBP16.31■□□□□ 0.2
COL11A2-201ENST00000341947 USP17L5A8MUK1 530 aa16.31■□□□□ 0.2
COL11A2-201ENST00000341947 NNMTP40261 264 aa16.31■□□□□ 0.2
COL11A2-201ENST00000341947 SNRNP48Q6IEG0 339 aaKnown RBP16.31■□□□□ 0.2
COL11A2-201ENST00000341947 TBC1D22BQ9NU19 505 aa16.31■□□□□ 0.2
COL11A2-201ENST00000341947 ZHX2Q9Y6X8 837 aa16.31■□□□□ 0.2
COL11A2-201ENST00000341947 NEMP1O14524 444 aa16.31■□□□□ 0.2
COL11A2-201ENST00000341947 EEF1B2P24534 225 aaKnown RBP16.31■□□□□ 0.2
COL11A2-201ENST00000341947 CLEC4GQ6UXB4 293 aa16.31■□□□□ 0.2
COL11A2-201ENST00000341947 TTC30BQ8N4P2 665 aa16.31■□□□□ 0.2
COL11A2-201ENST00000341947 PIGOQ8TEQ8 1089 aa16.31■□□□□ 0.2
COL11A2-201ENST00000341947 PANX2Q96RD6 677 aa16.31■□□□□ 0.2
COL11A2-201ENST00000341947 EDEM3Q9BZQ6 932 aa16.31■□□□□ 0.2
COL11A2-201ENST00000341947 WRNIP1Q96S55 665 aa16.31■□□□□ 0.2
COL11A2-201ENST00000341947 TRAIPQ9BWF2 469 aa16.31■□□□□ 0.2
COL11A2-201ENST00000341947 ADAM22Q9P0K1 906 aa16.31■□□□□ 0.2
COL11A2-201ENST00000341947 ZNF302Q9NR11 478 aa16.3■□□□□ 0.2
COL11A2-201ENST00000341947 ZNF212Q9UDV6 495 aa16.3■□□□□ 0.2
COL11A2-201ENST00000341947 METP08581 1390 aa16.3■□□□□ 0.2
COL11A2-201ENST00000341947 TRPA1O75762 1119 aa16.3■□□□□ 0.2
COL11A2-201ENST00000341947 HOXD10P28358 340 aa16.3■□□□□ 0.2
COL11A2-201ENST00000341947 NNTQ13423 1086 aa16.3■□□□□ 0.2
COL11A2-201ENST00000341947 FAM133BQ5BKY9 247 aaKnown RBP16.3■□□□□ 0.2
COL11A2-201ENST00000341947 TMEM35BQ8NCS4 154 aa16.3■□□□□ 0.2
COL11A2-201ENST00000341947 DNAJC12Q9UKB3 198 aa16.3■□□□□ 0.2
COL11A2-201ENST00000341947 ANGPTL2Q9UKU9 493 aa16.3■□□□□ 0.2
COL11A2-201ENST00000341947 USP6P35125 1406 aa16.3■□□□□ 0.2
COL11A2-201ENST00000341947 UGGT1Q9NYU2 1555 aa16.3■□□□□ 0.2
COL11A2-201ENST00000341947 GCC2Q8IWJ2 1684 aa16.3■□□□□ 0.2
COL11A2-201ENST00000341947 MAP3K7O43318 606 aa16.3■□□□□ 0.2
COL11A2-201ENST00000341947 SLC10A5Q5PT55 438 aa16.3■□□□□ 0.2
COL11A2-201ENST00000341947 KRT80Q6KB66 452 aa16.3■□□□□ 0.2
COL11A2-201ENST00000341947 SZRD1Q7Z422 152 aa16.3■□□□□ 0.2
COL11A2-201ENST00000341947 ECE2O60344 883 aa16.3■□□□□ 0.2
COL11A2-201ENST00000341947 KRT37O76014 449 aa16.3■□□□□ 0.2
COL11A2-201ENST00000341947 ADCY2Q08462 1091 aa16.3■□□□□ 0.2
COL11A2-201ENST00000341947 CUL1Q13616 776 aa16.3■□□□□ 0.2
COL11A2-201ENST00000341947 TTLL4Q14679 1199 aa16.3■□□□□ 0.2
COL11A2-201ENST00000341947 C6orf118Q5T5N4 469 aa16.3■□□□□ 0.2
COL11A2-201ENST00000341947 ALKBH5Q6P6C2 394 aaKnown RBP16.3■□□□□ 0.2
COL11A2-201ENST00000341947 UNC13DQ70J99 1090 aa16.3■□□□□ 0.2
COL11A2-201ENST00000341947 NCLNQ969V3 563 aa16.3■□□□□ 0.2
COL11A2-201ENST00000341947 KLHL29Q96CT2 875 aa16.3■□□□□ 0.2
COL11A2-201ENST00000341947 ABCB11O95342 1321 aa16.3■□□□□ 0.2
COL11A2-201ENST00000341947 ARL4CP56559 192 aa16.3■□□□□ 0.2
COL11A2-201ENST00000341947 TRMT10CQ7L0Y3 403 aaKnown RBP16.3■□□□□ 0.2
COL11A2-201ENST00000341947 RNF168Q8IYW5 571 aaPredicted RBP16.3■□□□□ 0.2
COL11A2-201ENST00000341947 NSUN6Q8TEA1 469 aaKnown RBP16.3■□□□□ 0.2
COL11A2-201ENST00000341947 PDCD6IPQ8WUM4 868 aaKnown RBP16.3■□□□□ 0.2
COL11A2-201ENST00000341947 STRIP2Q9ULQ0 834 aa16.3■□□□□ 0.2
COL11A2-201ENST00000341947 NOVA2Q9UNW9 492 aaKnown RBP16.3■□□□□ 0.2
COL11A2-201ENST00000341947 ERBB3P21860 1342 aa16.3■□□□□ 0.2
COL11A2-201ENST00000341947 RPS6KA4O75676 772 aa16.29■□□□□ 0.2
COL11A2-201ENST00000341947 TMCC1O94876 653 aa16.29■□□□□ 0.2
COL11A2-201ENST00000341947 CALB1P05937 261 aa16.29■□□□□ 0.2
COL11A2-201ENST00000341947 KRT76Q01546 638 aa16.29■□□□□ 0.2
COL11A2-201ENST00000341947 TFDP2Q14188 446 aa16.29■□□□□ 0.2
COL11A2-201ENST00000341947 ZNF394Q53GI3 561 aa16.29■□□□□ 0.2
COL11A2-201ENST00000341947 CRLF3Q8IUI8 442 aa16.29■□□□□ 0.2
COL11A2-201ENST00000341947 TTC13Q8NBP0 860 aa16.29■□□□□ 0.2
COL11A2-201ENST00000341947 ADGBQ8N7X0 1667 aa16.29■□□□□ 0.2
COL11A2-201ENST00000341947 FBXW4P57775 412 aa16.29■□□□□ 0.2
COL11A2-201ENST00000341947 HABP4Q5JVS0 413 aaKnown RBP16.29■□□□□ 0.2
COL11A2-201ENST00000341947 CALR3Q96L12 384 aaKnown RBP16.29■□□□□ 0.2
COL11A2-201ENST00000341947 C2orf40Q9H1Z8 148 aa16.29■□□□□ 0.2
COL11A2-201ENST00000341947 TEKT2Q9UIF3 430 aa16.29■□□□□ 0.2
COL11A2-201ENST00000341947 AFG1LQ8WV93 481 aa16.29■□□□□ 0.2
COL11A2-201ENST00000341947 ESRRAP11474 423 aaPredicted RBP16.29■□□□□ 0.2
COL11A2-201ENST00000341947 CA4P22748 312 aa16.29■□□□□ 0.2
COL11A2-201ENST00000341947 CACNB3P54284 484 aa16.29■□□□□ 0.2
COL11A2-201ENST00000341947 TBCCQ15814 346 aa16.29■□□□□ 0.2
COL11A2-201ENST00000341947 ALS2CLQ60I27 953 aa16.29■□□□□ 0.2
COL11A2-201ENST00000341947 PPP1R18Q6NYC8 613 aa16.29■□□□□ 0.2
COL11A2-201ENST00000341947 PADI6Q6TGC4 694 aa16.29■□□□□ 0.2
COL11A2-201ENST00000341947 APOBEC3FQ8IUX4 373 aaKnown RBP16.29■□□□□ 0.2
COL11A2-201ENST00000341947 TTLL11Q8NHH1 800 aa16.29■□□□□ 0.2
COL11A2-201ENST00000341947 EIF2AQ9BY44 585 aaKnown RBP16.29■□□□□ 0.2
COL11A2-201ENST00000341947 MAGEB5Q9BZ81 275 aa16.29■□□□□ 0.2
COL11A2-201ENST00000341947 SAYSD1Q9NPB0 183 aa16.29■□□□□ 0.2
COL11A2-201ENST00000341947 ANLNQ9NQW6 1124 aa16.29■□□□□ 0.2
COL11A2-201ENST00000341947 GDAQ9Y2T3 454 aa16.29■□□□□ 0.2
COL11A2-201ENST00000341947 UBE4BO95155 1302 aa16.29■□□□□ 0.2
COL11A2-201ENST00000341947 TBC1D9BQ66K14 1250 aa16.29■□□□□ 0.2
COL11A2-201ENST00000341947 TMED8Q6PL24 325 aaPredicted RBP16.29■□□□□ 0.2
COL11A2-201ENST00000341947 ACAP3Q96P50 834 aa16.29■□□□□ 0.2
COL11A2-201ENST00000341947 ANAPC7Q9UJX3 599 aa16.29■□□□□ 0.2
COL11A2-201ENST00000341947 KDM5CP41229 1560 aa16.28■□□□□ 0.2
COL11A2-201ENST00000341947 FOXD4Q12950 439 aaPredicted RBP16.28■□□□□ 0.2
COL11A2-201ENST00000341947 MMP19Q99542 508 aa16.28■□□□□ 0.2
COL11A2-201ENST00000341947 ZBBXA8MT70 800 aa16.28■□□□□ 0.2
COL11A2-201ENST00000341947 NRBF2Q96F24 287 aa16.28■□□□□ 0.2
COL11A2-201ENST00000341947 PIDD1Q9HB75 910 aa16.28■□□□□ 0.2
COL11A2-201ENST00000341947 CNOT8Q9UFF9 292 aaKnown RBP16.28■□□□□ 0.2
COL11A2-201ENST00000341947 LCA5Q86VQ0 697 aa16.28■□□□□ 0.2
COL11A2-201ENST00000341947 SPATA17Q96L03 361 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms