RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 RPTORQ8N122 1335 aa16.48■□□□□ 0.23
TPM3-208ENST00000341485 RSPH10B2B2RC85 870 aa16.48■□□□□ 0.23
TPM3-208ENST00000341485 CETN3O15182 167 aa16.48■□□□□ 0.23
TPM3-208ENST00000341485 RSPH10BP0C881 870 aa16.48■□□□□ 0.23
TPM3-208ENST00000341485 MYBP10242 640 aa16.48■□□□□ 0.23
TPM3-208ENST00000341485 NR2F2P24468 414 aa16.48■□□□□ 0.23
TPM3-208ENST00000341485 TDRD12Q587J7 1177 aaKnown RBP16.48■□□□□ 0.23
TPM3-208ENST00000341485 CAGE1Q8TC20 777 aa16.48■□□□□ 0.23
TPM3-208ENST00000341485 SLC10A4Q96EP9 437 aa16.48■□□□□ 0.23
TPM3-208ENST00000341485 ZFP91Q96JP5 570 aaPredicted RBP16.48■□□□□ 0.23
TPM3-208ENST00000341485 TAAR1Q96RJ0 339 aa16.48■□□□□ 0.23
TPM3-208ENST00000341485 EIF2AK1Q9BQI3 630 aaKnown RBP16.48■□□□□ 0.23
TPM3-208ENST00000341485 POLR3CQ9BUI4 534 aaPredicted RBP16.48■□□□□ 0.23
TPM3-208ENST00000341485 RUSC1Q9BVN2 902 aa16.48■□□□□ 0.23
TPM3-208ENST00000341485 NUCKS1Q9H1E3 243 aaKnown RBP16.48■□□□□ 0.23
TPM3-208ENST00000341485 ACAD9Q9H845 621 aa16.48■□□□□ 0.23
TPM3-208ENST00000341485 KCNH4Q9UQ05 1017 aa16.48■□□□□ 0.23
TPM3-208ENST00000341485 TRAF3IP3Q9Y228 551 aa16.48■□□□□ 0.23
TPM3-208ENST00000341485 RBAK-RBAKDNI3L0D1 243 aa16.47■□□□□ 0.23
TPM3-208ENST00000341485 SERPING1P05155 500 aa16.47■□□□□ 0.23
TPM3-208ENST00000341485 KNOP1Q1ED39 458 aaKnown RBP16.47■□□□□ 0.23
TPM3-208ENST00000341485 DRC1Q96MC2 740 aa16.47■□□□□ 0.23
TPM3-208ENST00000341485 MXRA8Q9BRK3 442 aa16.47■□□□□ 0.23
TPM3-208ENST00000341485 GANQ9H2C0 597 aa16.47■□□□□ 0.23
TPM3-208ENST00000341485 BCAS3Q9H6U6 928 aa16.47■□□□□ 0.23
TPM3-208ENST00000341485 RGL1Q9NZL6 768 aa16.47■□□□□ 0.23
TPM3-208ENST00000341485 PRPF6O94906 941 aaKnown RBP16.47■□□□□ 0.23
TPM3-208ENST00000341485 EIF2AK2P19525 551 aaKnown RBP16.47■□□□□ 0.23
TPM3-208ENST00000341485 KCNH2Q12809 1159 aa16.47■□□□□ 0.23
TPM3-208ENST00000341485 BAATQ14032 418 aaPredicted RBP16.47■□□□□ 0.23
TPM3-208ENST00000341485 SLC9C1Q4G0N8 1177 aa16.47■□□□□ 0.23
TPM3-208ENST00000341485 LDLRAD1Q5T700 205 aa16.47■□□□□ 0.23
TPM3-208ENST00000341485 ARHGEF16Q5VV41 709 aa16.47■□□□□ 0.23
TPM3-208ENST00000341485 FASTKD5Q7L8L6 764 aaKnown RBP16.47■□□□□ 0.23
TPM3-208ENST00000341485 MSL3Q8N5Y2 521 aaKnown RBP16.47■□□□□ 0.23
TPM3-208ENST00000341485 BHMT2Q9H2M3 363 aa16.47■□□□□ 0.23
TPM3-208ENST00000341485 PDE11AQ9HCR9 933 aa16.47■□□□□ 0.23
TPM3-208ENST00000341485 EYA4O95677 639 aa16.46■□□□□ 0.23
TPM3-208ENST00000341485 CASP8Q14790 479 aa16.46■□□□□ 0.23
TPM3-208ENST00000341485 LRCH2Q5VUJ6 765 aa16.46■□□□□ 0.23
TPM3-208ENST00000341485 PCNX4Q63HM2 1172 aa16.46■□□□□ 0.23
TPM3-208ENST00000341485 CREG2Q8IUH2 290 aa16.46■□□□□ 0.23
TPM3-208ENST00000341485 ANKRD13CQ8N6S4 541 aa16.46■□□□□ 0.23
TPM3-208ENST00000341485 RMDN3Q96TC7 470 aa16.46■□□□□ 0.23
TPM3-208ENST00000341485 ZNF577Q9BSK1 485 aa16.46■□□□□ 0.23
TPM3-208ENST00000341485 AGTPBP1Q9UPW5 1226 aa16.46■□□□□ 0.23
TPM3-208ENST00000341485 TARSL2A2RTX5 802 aaKnown RBP16.46■□□□□ 0.22
TPM3-208ENST00000341485 DCAF8L1A6NGE4 600 aa16.46■□□□□ 0.22
TPM3-208ENST00000341485 MYCLP12524 364 aaPredicted RBP16.46■□□□□ 0.22
TPM3-208ENST00000341485 C2orf54Q08AI8 447 aa16.46■□□□□ 0.22
TPM3-208ENST00000341485 DPY19L2P1Q6NXN4 242 aa16.46■□□□□ 0.22
TPM3-208ENST00000341485 LBX2Q6XYB7 198 aa16.46■□□□□ 0.22
TPM3-208ENST00000341485 IL31RAQ8NI17 732 aa16.46■□□□□ 0.22
TPM3-208ENST00000341485 COG1Q8WTW3 980 aa16.46■□□□□ 0.22
TPM3-208ENST00000341485 ALS2CR12Q96Q35 445 aa16.46■□□□□ 0.22
TPM3-208ENST00000341485 POLD4Q9HCU8 107 aa16.46■□□□□ 0.22
TPM3-208ENST00000341485 PXMP2Q9NR77 195 aa16.46■□□□□ 0.22
TPM3-208ENST00000341485 ASTN1O14525 1302 aa16.45■□□□□ 0.22
TPM3-208ENST00000341485 FRMPD4Q14CM0 1322 aa16.45■□□□□ 0.22
TPM3-208ENST00000341485 GAS7O60861 476 aa16.45■□□□□ 0.22
TPM3-208ENST00000341485 ARP10275 920 aa16.45■□□□□ 0.22
TPM3-208ENST00000341485 PRLRP16471 622 aa16.45■□□□□ 0.22
TPM3-208ENST00000341485 OSBPP22059 807 aa16.45■□□□□ 0.22
TPM3-208ENST00000341485 CYP2C19P33261 490 aa16.45■□□□□ 0.22
TPM3-208ENST00000341485 RAPGEF1Q13905 1077 aa16.45■□□□□ 0.22
TPM3-208ENST00000341485 PGM5Q15124 567 aa16.45■□□□□ 0.22
TPM3-208ENST00000341485 BMT2Q1RMZ1 405 aa16.45■□□□□ 0.22
TPM3-208ENST00000341485 ZNF572Q7Z3I7 529 aaPredicted RBP16.45■□□□□ 0.22
TPM3-208ENST00000341485 FRMD5Q7Z6J6 570 aa16.45■□□□□ 0.22
TPM3-208ENST00000341485 SLC5A5Q92911 643 aa16.45■□□□□ 0.22
TPM3-208ENST00000341485 ASCC2Q9H1I8 757 aaPredicted RBP16.45■□□□□ 0.22
TPM3-208ENST00000341485 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.45■□□□□ 0.22
TPM3-208ENST00000341485 UNCXA6NJT0 531 aa16.44■□□□□ 0.22
TPM3-208ENST00000341485 PDXKO00764 312 aa16.44■□□□□ 0.22
TPM3-208ENST00000341485 CALUO43852 315 aaPredicted RBP16.44■□□□□ 0.22
TPM3-208ENST00000341485 SNAPC2Q13487 334 aa16.44■□□□□ 0.22
TPM3-208ENST00000341485 CTTNQ14247 550 aaKnown RBP16.44■□□□□ 0.22
TPM3-208ENST00000341485 NFRKBQ6P4R8 1299 aa16.44■□□□□ 0.22
TPM3-208ENST00000341485 OTOP1Q7RTM1 612 aa16.44■□□□□ 0.22
TPM3-208ENST00000341485 CHST13Q8NET6 341 aa16.44■□□□□ 0.22
TPM3-208ENST00000341485 OSBPL9Q96SU4 736 aa16.44■□□□□ 0.22
TPM3-208ENST00000341485 HSD17B14Q9BPX1 270 aa16.44■□□□□ 0.22
TPM3-208ENST00000341485 PAGR1Q9BTK6 254 aa16.44■□□□□ 0.22
TPM3-208ENST00000341485 TEKT3Q9BXF9 490 aa16.44■□□□□ 0.22
TPM3-208ENST00000341485 AIPL1Q9NZN9 384 aa16.44■□□□□ 0.22
TPM3-208ENST00000341485 SRCAPQ6ZRS2 3230 aa16.44■□□□□ 0.22
TPM3-208ENST00000341485 LRRIQ3A6PVS8 624 aaPredicted RBP16.44■□□□□ 0.22
TPM3-208ENST00000341485 CHMP2AO43633 222 aa16.44■□□□□ 0.22
TPM3-208ENST00000341485 NCK2O43639 380 aa16.44■□□□□ 0.22
TPM3-208ENST00000341485 BUB1O43683 1085 aa16.44■□□□□ 0.22
TPM3-208ENST00000341485 TBCAO75347 108 aaKnown RBP16.44■□□□□ 0.22
TPM3-208ENST00000341485 PSMD10O75832 226 aa16.44■□□□□ 0.22
TPM3-208ENST00000341485 ACTN1P12814 892 aa16.44■□□□□ 0.22
TPM3-208ENST00000341485 ITGB5P18084 799 aa16.44■□□□□ 0.22
TPM3-208ENST00000341485 RINT1Q6NUQ1 792 aa16.44■□□□□ 0.22
TPM3-208ENST00000341485 NIPA1Q7RTP0 329 aa16.44■□□□□ 0.22
TPM3-208ENST00000341485 TXLNBQ8N3L3 684 aa16.44■□□□□ 0.22
TPM3-208ENST00000341485 PIGOQ8TEQ8 1089 aa16.44■□□□□ 0.22
TPM3-208ENST00000341485 DYDC2Q96IM9 177 aa16.44■□□□□ 0.22
TPM3-208ENST00000341485 PDCD2LQ9BRP1 358 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms