RNA–Protein interactions for RNA: ENST00000341421.7

TRAK1-202, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 4,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-202ENST00000341421 SETDB1Q15047 1291 aa12.68□□□□□ -0.38
TRAK1-202ENST00000341421 PREPLQ4J6C6 727 aaPredicted RBP12.68□□□□□ -0.38
TRAK1-202ENST00000341421 SEPT12Q8IYM1 358 aa12.68□□□□□ -0.38
TRAK1-202ENST00000341421 ZKSCAN4Q969J2 545 aaPredicted RBP12.68□□□□□ -0.38
TRAK1-202ENST00000341421 TRIM11Q96F44 468 aa12.68□□□□□ -0.38
TRAK1-202ENST00000341421 SLITRK6Q9H5Y7 841 aa12.68□□□□□ -0.38
TRAK1-202ENST00000341421 SERPINA10Q9UK55 444 aa12.68□□□□□ -0.38
TRAK1-202ENST00000341421 DNAJC12Q9UKB3 198 aa12.68□□□□□ -0.38
TRAK1-202ENST00000341421 GH2P01242 217 aa12.67□□□□□ -0.38
TRAK1-202ENST00000341421 MYO1EQ12965 1108 aa12.67□□□□□ -0.38
TRAK1-202ENST00000341421 C3orf67Q6ZVT6 689 aa12.67□□□□□ -0.38
TRAK1-202ENST00000341421 NIM1KQ8IY84 436 aa12.67□□□□□ -0.38
TRAK1-202ENST00000341421 BBOF1Q8ND07 529 aa12.67□□□□□ -0.38
TRAK1-202ENST00000341421 TAF1DQ9H5J8 278 aaPredicted RBP12.67□□□□□ -0.38
TRAK1-202ENST00000341421 HOMER2Q9NSB8 354 aa12.67□□□□□ -0.38
TRAK1-202ENST00000341421 APBA3O96018 575 aa12.67□□□□□ -0.38
TRAK1-202ENST00000341421 HOXA13P31271 388 aaPredicted RBP12.67□□□□□ -0.38
TRAK1-202ENST00000341421 DHX9Q08211 1270 aaKnown RBP12.67□□□□□ -0.38
TRAK1-202ENST00000341421 DDR1Q08345 913 aa12.67□□□□□ -0.38
TRAK1-202ENST00000341421 CTTNQ14247 550 aaKnown RBP12.67□□□□□ -0.38
TRAK1-202ENST00000341421 MEA1Q16626 185 aa12.67□□□□□ -0.38
TRAK1-202ENST00000341421 PTGISQ16647 500 aa12.67□□□□□ -0.38
TRAK1-202ENST00000341421 TTBK2Q6IQ55 1244 aa12.67□□□□□ -0.38
TRAK1-202ENST00000341421 CYB5D1Q6P9G0 228 aa12.67□□□□□ -0.38
TRAK1-202ENST00000341421 FMO2Q99518 471 aa12.67□□□□□ -0.38
TRAK1-202ENST00000341421 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.67□□□□□ -0.382e-9■■■□□ 15.9
TRAK1-202ENST00000341421 TRIM7Q9C029 511 aa12.67□□□□□ -0.38
TRAK1-202ENST00000341421 PICK1Q9NRD5 415 aa12.67□□□□□ -0.38
TRAK1-202ENST00000341421 MXI1P50539 228 aa12.67□□□□□ -0.38
TRAK1-202ENST00000341421 HERVK_113P62684 666 aa12.67□□□□□ -0.38
TRAK1-202ENST00000341421 MOXD1Q6UVY6 613 aa12.67□□□□□ -0.38
TRAK1-202ENST00000341421 KAT2BQ92831 832 aa12.67□□□□□ -0.38
TRAK1-202ENST00000341421 HVCN1Q96D96 273 aa12.67□□□□□ -0.38
TRAK1-202ENST00000341421 TUFT1Q9NNX1 390 aa12.67□□□□□ -0.38
TRAK1-202ENST00000341421 HAUS2Q9NVX0 235 aa12.67□□□□□ -0.38
TRAK1-202ENST00000341421 KLK7P49862 253 aa12.66□□□□□ -0.38
TRAK1-202ENST00000341421 SP4Q02446 784 aa12.66□□□□□ -0.38
TRAK1-202ENST00000341421 TXNRD3Q86VQ6 643 aa12.66□□□□□ -0.38
TRAK1-202ENST00000341421 TNFRSF25Q93038 417 aa12.66□□□□□ -0.38
TRAK1-202ENST00000341421 EHD4Q9H223 541 aa12.66□□□□□ -0.38
TRAK1-202ENST00000341421 MYO3BQ8WXR4 1341 aa12.66□□□□□ -0.38
TRAK1-202ENST00000341421 ALDH3A1P30838 453 aa12.66□□□□□ -0.38
TRAK1-202ENST00000341421 PBX1P40424 430 aa12.66□□□□□ -0.38
TRAK1-202ENST00000341421 MESDQ14696 234 aa12.66□□□□□ -0.38
TRAK1-202ENST00000341421 GNPTABQ3T906 1256 aa12.66□□□□□ -0.38
TRAK1-202ENST00000341421 CAPRIN2Q6IMN6 1127 aaKnown RBP12.66□□□□□ -0.38
TRAK1-202ENST00000341421 PPP1R2P3Q6NXS1 205 aa12.66□□□□□ -0.38
TRAK1-202ENST00000341421 KDM7AQ6ZMT4 941 aa12.66□□□□□ -0.38
TRAK1-202ENST00000341421 PLAAQ9Y263 795 aa12.66□□□□□ -0.38
TRAK1-202ENST00000341421 HGSO14964 777 aaPredicted RBP12.66□□□□□ -0.38
TRAK1-202ENST00000341421 SART1O43290 800 aaKnown RBP12.66□□□□□ -0.38
TRAK1-202ENST00000341421 SHOX2O60902 331 aaPredicted RBP12.66□□□□□ -0.38
TRAK1-202ENST00000341421 ITIH3Q06033 890 aa12.66□□□□□ -0.38
TRAK1-202ENST00000341421 NAB2Q15742 525 aa12.66□□□□□ -0.38
TRAK1-202ENST00000341421 ARHGEF16Q5VV41 709 aa12.66□□□□□ -0.38
TRAK1-202ENST00000341421 NAIF1Q69YI7 327 aaPredicted RBP12.66□□□□□ -0.38
TRAK1-202ENST00000341421 SMIM5Q71RC9 77 aa12.66□□□□□ -0.38
TRAK1-202ENST00000341421 ARL8AQ96BM9 186 aa12.66□□□□□ -0.38
TRAK1-202ENST00000341421 FERMT1Q9BQL6 677 aa12.66□□□□□ -0.38
TRAK1-202ENST00000341421 SYNGAP1Q96PV0 1343 aa12.66□□□□□ -0.38
TRAK1-202ENST00000341421 LRRN2O75325 713 aa12.66□□□□□ -0.38
TRAK1-202ENST00000341421 SKOR1P84550 965 aa12.66□□□□□ -0.38
TRAK1-202ENST00000341421 DR1Q01658 176 aa12.66□□□□□ -0.38
TRAK1-202ENST00000341421 MYCBPAPQ8TBZ2 947 aa12.66□□□□□ -0.38
TRAK1-202ENST00000341421 RNPC3Q96LT9 517 aaKnown RBP12.66□□□□□ -0.38
TRAK1-202ENST00000341421 ZIM3Q96PE6 472 aa12.66□□□□□ -0.38
TRAK1-202ENST00000341421 UBE2TQ9NPD8 197 aaPredicted RBP12.66□□□□□ -0.38
TRAK1-202ENST00000341421 PHRF1Q9P1Y6 1649 aaKnown RBP12.66□□□□□ -0.38
TRAK1-202ENST00000341421 KRT14P02533 472 aa12.65□□□□□ -0.38
TRAK1-202ENST00000341421 TNNI1P19237 187 aa12.65□□□□□ -0.38
TRAK1-202ENST00000341421 RPA1P27694 616 aa12.65□□□□□ -0.38
TRAK1-202ENST00000341421 STAT3P40763 770 aa12.65□□□□□ -0.38
TRAK1-202ENST00000341421 SEC24CP53992 1094 aa12.65□□□□□ -0.38
TRAK1-202ENST00000341421 ATP6V0A1Q93050 837 aa12.65□□□□□ -0.38
TRAK1-202ENST00000341421 CCDC127Q96BQ5 260 aa12.65□□□□□ -0.38
TRAK1-202ENST00000341421 EIF2AK1Q9BQI3 630 aaKnown RBP12.65□□□□□ -0.38
TRAK1-202ENST00000341421 AP1M1Q9BXS5 423 aa12.65□□□□□ -0.38
TRAK1-202ENST00000341421 IQCGQ9H095 443 aaKnown RBP12.65□□□□□ -0.38
TRAK1-202ENST00000341421 SEMA6BQ9H3T3 888 aa12.65□□□□□ -0.38
TRAK1-202ENST00000341421 TESPA1A2RU30 521 aaPredicted RBP12.65□□□□□ -0.38
TRAK1-202ENST00000341421 PODXLO00592 558 aa12.65□□□□□ -0.38
TRAK1-202ENST00000341421 FGGP02679 453 aa12.65□□□□□ -0.38
TRAK1-202ENST00000341421 PMS1P54277 932 aaKnown RBP12.65□□□□□ -0.38
TRAK1-202ENST00000341421 CCDC6Q16204 474 aa12.65□□□□□ -0.38
TRAK1-202ENST00000341421 ZNF662Q6ZS27 426 aa12.65□□□□□ -0.38
TRAK1-202ENST00000341421 ADAT2Q7Z6V5 191 aaKnown RBP12.65□□□□□ -0.38
TRAK1-202ENST00000341421 CDAN1Q8IWY9 1227 aa12.65□□□□□ -0.38
TRAK1-202ENST00000341421 PIGOQ8TEQ8 1089 aa12.65□□□□□ -0.38
TRAK1-202ENST00000341421 FAM163AQ96GL9 167 aaPredicted RBP12.65□□□□□ -0.38
TRAK1-202ENST00000341421 DUSP9Q99956 384 aaKnown RBP12.65□□□□□ -0.38
TRAK1-202ENST00000341421 ATP8A1Q9Y2Q0 1164 aa12.65□□□□□ -0.38
TRAK1-202ENST00000341421 USP54Q70EL1 1684 aa12.65□□□□□ -0.38
TRAK1-202ENST00000341421 SLC37A4O43826 429 aa12.65□□□□□ -0.38
TRAK1-202ENST00000341421 HIP1RO75146 1068 aa12.65□□□□□ -0.38
TRAK1-202ENST00000341421 HDLBPQ00341 1268 aaKnown RBP12.65□□□□□ -0.38
TRAK1-202ENST00000341421 PTK2Q05397 1052 aa12.65□□□□□ -0.38
TRAK1-202ENST00000341421 YTHDF3Q7Z739 585 aaKnown RBP12.65□□□□□ -0.38
TRAK1-202ENST00000341421 CYFIP2Q96F07 1278 aa12.65□□□□□ -0.38
TRAK1-202ENST00000341421 LACRTQ9GZZ8 138 aa12.65□□□□□ -0.38
TRAK1-202ENST00000341421 TMOD4Q9NZQ9 345 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms