RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 RHBDL2Q9NX52 303 aa12.87□□□□□ -0.35
RTN3-203ENST00000341307 LNPEPQ9UIQ6 1025 aa12.87□□□□□ -0.35
RTN3-203ENST00000341307 MYH1P12882 1939 aa12.87□□□□□ -0.35
RTN3-203ENST00000341307 GAKO14976 1311 aa12.87□□□□□ -0.35
RTN3-203ENST00000341307 DCDC2CA8MYV0 355 aa12.87□□□□□ -0.35
RTN3-203ENST00000341307 G3V3G9 751 aa12.87□□□□□ -0.35
RTN3-203ENST00000341307 UBOX5O94941 541 aa12.87□□□□□ -0.35
RTN3-203ENST00000341307 MSH2P43246 934 aa12.87□□□□□ -0.35
RTN3-203ENST00000341307 NPY5RQ15761 445 aa12.87□□□□□ -0.35
RTN3-203ENST00000341307 DCAF8Q5TAQ9 597 aa12.87□□□□□ -0.35
RTN3-203ENST00000341307 LONP2Q86WA8 852 aa12.87□□□□□ -0.35
RTN3-203ENST00000341307 KIF2BQ8N4N8 673 aa12.87□□□□□ -0.35
RTN3-203ENST00000341307 ANKS4BQ8N8V4 417 aa12.87□□□□□ -0.35
RTN3-203ENST00000341307 GPKOWQ92917 476 aaPredicted RBP eCLIP12.87□□□□□ -0.353e-6■□□□□ 9.4
RTN3-203ENST00000341307 EPB41L5Q9HCM4 733 aa12.87□□□□□ -0.35
RTN3-203ENST00000341307 PCDHAC2Q9Y5I4 1007 aa12.87□□□□□ -0.35
RTN3-203ENST00000341307 ADAMTSL1Q8N6G6 1762 aa12.87□□□□□ -0.35
RTN3-203ENST00000341307 DDX60LQ5H9U9 1706 aaKnown RBP12.87□□□□□ -0.35
RTN3-203ENST00000341307 SYNRGQ9UMZ2 1314 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 NFKBIEO00221 500 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 FLOT1O75955 427 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 KRT2P35908 639 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 HSPA9P38646 679 aaKnown RBP12.86□□□□□ -0.35
RTN3-203ENST00000341307 USP46P62068 366 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 CUL4BQ13620 913 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 TRADDQ15628 312 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 SLC35G1Q2M3R5 365 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 RILPL1Q5EBL4 403 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 ERMARDQ5T6L9 678 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 WDR59Q6PJI9 974 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 LRIG3Q6UXM1 1119 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 TMC4Q7Z404 712 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 DGKHQ86XP1 1220 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 EYA3Q99504 573 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 TMEM47Q9BQJ4 181 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 ECT2Q9H8V3 914 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 DDX4Q9NQI0 724 aaKnown RBP12.86□□□□□ -0.35
RTN3-203ENST00000341307 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.86□□□□□ -0.35
RTN3-203ENST00000341307 BRCA1P38398 1863 aaKnown RBP12.86□□□□□ -0.35
RTN3-203ENST00000341307 MYH10P35580 1976 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 MACROD2A1Z1Q3 448 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 E2F6O75461 281 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 GFPT2O94808 682 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 XBP1P17861 261 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 GSTT1P30711 240 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 ZNF844Q08AG5 666 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 USP49Q70CQ1 688 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 EXOC3L1Q86VI1 746 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 TRIML1Q8N9V2 468 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 UCMAQ8WVF2 138 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 CASKIN2Q8WXE0 1202 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 FAM136AQ96C01 138 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 IWS1Q96ST2 819 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 ARPC5LQ9BPX5 153 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 UNC45AQ9H3U1 944 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 ARHGEF3Q9NR81 526 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 ZNF277Q9NRM2 450 aaPredicted RBP12.86□□□□□ -0.35
RTN3-203ENST00000341307 STK38LQ9Y2H1 464 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 WDR37Q9Y2I8 494 aa12.86□□□□□ -0.35
RTN3-203ENST00000341307 SNED1Q8TER0 1413 aa12.85□□□□□ -0.35
RTN3-203ENST00000341307 ASAP2O43150 1006 aa12.85□□□□□ -0.35
RTN3-203ENST00000341307 HEXIM1O94992 359 aaKnown RBP12.85□□□□□ -0.35
RTN3-203ENST00000341307 VIL1P09327 827 aaKnown RBP12.85□□□□□ -0.35
RTN3-203ENST00000341307 SCG2P13521 617 aa12.85□□□□□ -0.35
RTN3-203ENST00000341307 GUCY2DQ02846 1103 aa12.85□□□□□ -0.35
RTN3-203ENST00000341307 KIF5AQ12840 1032 aa12.85□□□□□ -0.35
RTN3-203ENST00000341307 CBX3Q13185 183 aa12.85□□□□□ -0.35
RTN3-203ENST00000341307 PLS1Q14651 629 aa12.85□□□□□ -0.35
RTN3-203ENST00000341307 UAP1Q16222 522 aaPredicted RBP12.85□□□□□ -0.35
RTN3-203ENST00000341307 KLHL10Q6JEL2 608 aa12.85□□□□□ -0.35
RTN3-203ENST00000341307 NFRKBQ6P4R8 1299 aa12.85□□□□□ -0.35
RTN3-203ENST00000341307 CLEC10AQ8IUN9 316 aa12.85□□□□□ -0.35
RTN3-203ENST00000341307 KRI1Q8N9T8 703 aaKnown RBP12.85□□□□□ -0.35
RTN3-203ENST00000341307 XPO6Q96QU8 1125 aaKnown RBP12.85□□□□□ -0.35
RTN3-203ENST00000341307 CORO1BQ9BR76 489 aa12.85□□□□□ -0.35
RTN3-203ENST00000341307 FAM129AQ9BZQ8 928 aa12.85□□□□□ -0.35
RTN3-203ENST00000341307 TMOD4Q9NZQ9 345 aa12.85□□□□□ -0.35
RTN3-203ENST00000341307 MAD2L2Q9UI95 211 aa12.85□□□□□ -0.35
RTN3-203ENST00000341307 FBXO2Q9UK22 296 aaPredicted RBP12.85□□□□□ -0.35
RTN3-203ENST00000341307 WFS1O76024 890 aa12.85□□□□□ -0.35
RTN3-203ENST00000341307 CXCR5P32302 372 aa12.85□□□□□ -0.35
RTN3-203ENST00000341307 HSD17B3P37058 310 aa12.85□□□□□ -0.35
RTN3-203ENST00000341307 PLOD1Q02809 727 aaPredicted RBP12.85□□□□□ -0.35
RTN3-203ENST00000341307 BIRC3Q13489 604 aa12.85□□□□□ -0.35
RTN3-203ENST00000341307 KRT31Q15323 416 aa12.85□□□□□ -0.35
RTN3-203ENST00000341307 GALNTL6Q49A17 601 aa12.85□□□□□ -0.35
RTN3-203ENST00000341307 C16orf86Q6ZW13 317 aa12.85□□□□□ -0.35
RTN3-203ENST00000341307 SESTD1Q86VW0 696 aa12.85□□□□□ -0.35
RTN3-203ENST00000341307 MDM1Q8TC05 714 aa12.85□□□□□ -0.35
RTN3-203ENST00000341307 SERTAD1Q9UHV2 236 aa12.85□□□□□ -0.35
RTN3-203ENST00000341307 MYH7BA7E2Y1 1941 aa12.84□□□□□ -0.35
RTN3-203ENST00000341307 CYTH3O43739 400 aa12.84□□□□□ -0.35
RTN3-203ENST00000341307 SPATA31D3P0C874 917 aa12.84□□□□□ -0.35
RTN3-203ENST00000341307 ACADSP16219 412 aa12.84□□□□□ -0.35
RTN3-203ENST00000341307 PRLRP16471 622 aa12.84□□□□□ -0.35
RTN3-203ENST00000341307 PLCG2P16885 1265 aa12.84□□□□□ -0.35
RTN3-203ENST00000341307 PEX5P50542 639 aa12.84□□□□□ -0.35
RTN3-203ENST00000341307 CACNB3P54284 484 aa12.84□□□□□ -0.35
RTN3-203ENST00000341307 EIF6P56537 245 aaKnown RBP12.84□□□□□ -0.35
RTN3-203ENST00000341307 NLRP5P59047 1200 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms