RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 VCPKMTQ9H867 229 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 PSTPIP2Q9H939 334 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 TMOD4Q9NZQ9 345 aa13.03□□□□□ -0.32
CCDC144CP-201ENST00000340196 LRRC37AA6NMS7 1700 aa13.02□□□□□ -0.32
CCDC144CP-201ENST00000340196 FOXO6A8MYZ6 492 aa13.02□□□□□ -0.33
CCDC144CP-201ENST00000340196 RIMBP2O15034 1052 aa13.02□□□□□ -0.33
CCDC144CP-201ENST00000340196 CETN3O15182 167 aa13.02□□□□□ -0.33
CCDC144CP-201ENST00000340196 CAND2O75155 1236 aa13.02□□□□□ -0.33
CCDC144CP-201ENST00000340196 CACNB3P54284 484 aa13.02□□□□□ -0.33
CCDC144CP-201ENST00000340196 PSMD2Q13200 908 aa13.02□□□□□ -0.33
CCDC144CP-201ENST00000340196 C6orf89Q6UWU4 347 aa13.02□□□□□ -0.33
CCDC144CP-201ENST00000340196 TMC3Q7Z5M5 1100 aa13.02□□□□□ -0.33
CCDC144CP-201ENST00000340196 CATSPER3Q86XQ3 398 aa13.02□□□□□ -0.33
CCDC144CP-201ENST00000340196 CEP57Q86XR8 500 aa13.02□□□□□ -0.33
CCDC144CP-201ENST00000340196 CPNE8Q86YQ8 564 aa13.02□□□□□ -0.33
CCDC144CP-201ENST00000340196 CCDC65Q8IXS2 484 aa13.02□□□□□ -0.33
CCDC144CP-201ENST00000340196 LNX1Q8TBB1 728 aaPredicted RBP13.02□□□□□ -0.33
CCDC144CP-201ENST00000340196 KLC4Q9NSK0 619 aa13.02□□□□□ -0.33
CCDC144CP-201ENST00000340196 BMP2KQ9NSY1 1161 aaPredicted RBP13.02□□□□□ -0.33
CCDC144CP-201ENST00000340196 SEPT11Q9NVA2 429 aaKnown RBP13.02□□□□□ -0.33
CCDC144CP-201ENST00000340196 GCNT4Q9P109 453 aa13.02□□□□□ -0.33
CCDC144CP-201ENST00000340196 ARMCX3Q9UH62 379 aaPredicted RBP13.02□□□□□ -0.33
CCDC144CP-201ENST00000340196 MYH7BA7E2Y1 1941 aa13.02□□□□□ -0.33
CCDC144CP-201ENST00000340196 GOLGA6L7A0A1B0GV03 622 aa13.02□□□□□ -0.33
CCDC144CP-201ENST00000340196 ESYT2A0FGR8 921 aa13.02□□□□□ -0.33
CCDC144CP-201ENST00000340196 GMNCA6NCL1 334 aa13.02□□□□□ -0.33
CCDC144CP-201ENST00000340196 BUB1BO60566 1050 aaPredicted RBP13.02□□□□□ -0.33
CCDC144CP-201ENST00000340196 SLCO1A2P46721 670 aa13.02□□□□□ -0.33
CCDC144CP-201ENST00000340196 SCNN1DP51172 638 aa13.02□□□□□ -0.33
CCDC144CP-201ENST00000340196 ZC2HC1CQ53FD0 456 aaPredicted RBP13.02□□□□□ -0.33
CCDC144CP-201ENST00000340196 FAM228AQ86W67 206 aa13.02□□□□□ -0.33
CCDC144CP-201ENST00000340196 ARHGEF26Q96DR7 871 aa13.02□□□□□ -0.33
CCDC144CP-201ENST00000340196 SCLT1Q96NL6 688 aa13.02□□□□□ -0.33
CCDC144CP-201ENST00000340196 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.02□□□□□ -0.33
CCDC144CP-201ENST00000340196 SIX2Q9NPC8 291 aa13.02□□□□□ -0.33
CCDC144CP-201ENST00000340196 RNF14Q9UBS8 474 aa13.02□□□□□ -0.33
CCDC144CP-201ENST00000340196 LTBP1Q14766 1721 aa13.01□□□□□ -0.33
CCDC144CP-201ENST00000340196 GPR75-ASB3A0A0A6YYF3 556 aa13.01□□□□□ -0.33
CCDC144CP-201ENST00000340196 TRAPPC3O43617 180 aa13.01□□□□□ -0.33
CCDC144CP-201ENST00000340196 GALCP54803 685 aa13.01□□□□□ -0.33
CCDC144CP-201ENST00000340196 USH1GQ495M9 461 aa13.01□□□□□ -0.33
CCDC144CP-201ENST00000340196 ZNF804AQ7Z570 1209 aa13.01□□□□□ -0.33
CCDC144CP-201ENST00000340196 PIGOQ8TEQ8 1089 aa13.01□□□□□ -0.33
CCDC144CP-201ENST00000340196 SYN2Q92777 582 aaPredicted RBP13.01□□□□□ -0.33
CCDC144CP-201ENST00000340196 SEC16BQ96JE7 1060 aa13.01□□□□□ -0.33
CCDC144CP-201ENST00000340196 CAMKK2Q96RR4 588 aa13.01□□□□□ -0.33
CCDC144CP-201ENST00000340196 EDEM3Q9BZQ6 932 aa13.01□□□□□ -0.33
CCDC144CP-201ENST00000340196 LUC7LQ9NQ29 371 aaKnown RBP13.01□□□□□ -0.33
CCDC144CP-201ENST00000340196 RGL1Q9NZL6 768 aa13.01□□□□□ -0.33
CCDC144CP-201ENST00000340196 PCDHAC2Q9Y5I4 1007 aa13.01□□□□□ -0.33
CCDC144CP-201ENST00000340196 MARCKSL1P49006 195 aa13.01□□□□□ -0.33
CCDC144CP-201ENST00000340196 CLK2P49760 499 aaKnown RBP13.01□□□□□ -0.33
CCDC144CP-201ENST00000340196 SLC12A3P55017 1021 aa13.01□□□□□ -0.33
CCDC144CP-201ENST00000340196 GSTO1P78417 241 aa13.01□□□□□ -0.33
CCDC144CP-201ENST00000340196 MAP2K1Q02750 393 aaPredicted RBP13.01□□□□□ -0.33
CCDC144CP-201ENST00000340196 ZNF543Q08ER8 600 aa13.01□□□□□ -0.33
CCDC144CP-201ENST00000340196 CCDC121Q6ZUS5 278 aa13.01□□□□□ -0.33
CCDC144CP-201ENST00000340196 ATP8B4Q8TF62 1192 aa13.01□□□□□ -0.33
CCDC144CP-201ENST00000340196 CUL5Q93034 780 aa13.01□□□□□ -0.33
CCDC144CP-201ENST00000340196 CEP63Q96MT8 703 aa13.01□□□□□ -0.33
CCDC144CP-201ENST00000340196 RUSC1Q9BVN2 902 aa13.01□□□□□ -0.33
CCDC144CP-201ENST00000340196 DHX36Q9H2U1 1008 aaKnown RBP13.01□□□□□ -0.33
CCDC144CP-201ENST00000340196 FRMD3A2A2Y4 597 aa13□□□□□ -0.33
CCDC144CP-201ENST00000340196 HGSO14964 777 aaPredicted RBP13□□□□□ -0.33
CCDC144CP-201ENST00000340196 AFPP02771 609 aaKnown RBP13□□□□□ -0.33
CCDC144CP-201ENST00000340196 TRIM49P0CI25 452 aa13□□□□□ -0.33
CCDC144CP-201ENST00000340196 TRIM49CP0CI26 452 aa13□□□□□ -0.33
CCDC144CP-201ENST00000340196 XRCC5P13010 732 aaKnown RBP13□□□□□ -0.33
CCDC144CP-201ENST00000340196 PPP2R2AP63151 447 aa13□□□□□ -0.33
CCDC144CP-201ENST00000340196 GTF2IP78347 998 aa13□□□□□ -0.33
CCDC144CP-201ENST00000340196 GIT2Q14161 759 aa13□□□□□ -0.33
CCDC144CP-201ENST00000340196 CCDC38Q502W7 563 aa13□□□□□ -0.33
CCDC144CP-201ENST00000340196 NT5DC3Q86UY8 548 aa13□□□□□ -0.33
CCDC144CP-201ENST00000340196 RDH13Q8NBN7 331 aa13□□□□□ -0.33
CCDC144CP-201ENST00000340196 OLIG1Q8TAK6 271 aa13□□□□□ -0.33
CCDC144CP-201ENST00000340196 ELMO3Q96BJ8 720 aa13□□□□□ -0.33
CCDC144CP-201ENST00000340196 BHMT2Q9H2M3 363 aa13□□□□□ -0.33
CCDC144CP-201ENST00000340196 SNX24Q9Y343 169 aa13□□□□□ -0.33
CCDC144CP-201ENST00000340196 DAGLAQ9Y4D2 1042 aa13□□□□□ -0.33
CCDC144CP-201ENST00000340196 ASTN1O14525 1302 aa13□□□□□ -0.33
CCDC144CP-201ENST00000340196 PNMA6FA0A0J9YX94 578 aa13□□□□□ -0.33
CCDC144CP-201ENST00000340196 SPDYE3A6NKU9 549 aa13□□□□□ -0.33
CCDC144CP-201ENST00000340196 F8VZ95 297 aa13□□□□□ -0.33
CCDC144CP-201ENST00000340196 GCNT3O95395 438 aa13□□□□□ -0.33
CCDC144CP-201ENST00000340196 IFFO1Q0D2I5 559 aa13□□□□□ -0.33
CCDC144CP-201ENST00000340196 EPHA7Q15375 998 aa13□□□□□ -0.33
CCDC144CP-201ENST00000340196 PPP4R3AQ6IN85 833 aa13□□□□□ -0.33
CCDC144CP-201ENST00000340196 ZFPM1Q8IX07 1006 aa13□□□□□ -0.33
CCDC144CP-201ENST00000340196 ACTRT1Q8TDG2 376 aa13□□□□□ -0.33
CCDC144CP-201ENST00000340196 SLC35C1Q96A29 364 aa13□□□□□ -0.33
CCDC144CP-201ENST00000340196 SELENOSQ9BQE4 189 aa13□□□□□ -0.33
CCDC144CP-201ENST00000340196 EPB41L3Q9Y2J2 1087 aaPredicted RBP13□□□□□ -0.33
CCDC144CP-201ENST00000340196 TMEM110-MUSTN1A8MSY1 372 aa12.99□□□□□ -0.33
CCDC144CP-201ENST00000340196 PPP1R12AO14974 1030 aaPredicted RBP12.99□□□□□ -0.33
CCDC144CP-201ENST00000340196 EVI5O60447 810 aa12.99□□□□□ -0.33
CCDC144CP-201ENST00000340196 RASSF9O75901 435 aa12.99□□□□□ -0.33
CCDC144CP-201ENST00000340196 NMT1P30419 496 aaKnown RBP12.99□□□□□ -0.33
CCDC144CP-201ENST00000340196 HOXA13P31271 388 aaPredicted RBP12.99□□□□□ -0.33
CCDC144CP-201ENST00000340196 IFNAR2P48551 515 aa12.99□□□□□ -0.33
CCDC144CP-201ENST00000340196 PLTPP55058 493 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms