RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 RRP9O43818 475 aaKnown RBP16.95■□□□□ 0.3
MBD1-203ENST00000339998 GNA14O95837 355 aa16.95■□□□□ 0.3
MBD1-203ENST00000339998 AFPP02771 609 aaKnown RBP16.95■□□□□ 0.3
MBD1-203ENST00000339998 DPY19L2P1Q6NXN4 242 aa16.95■□□□□ 0.3
MBD1-203ENST00000339998 NLRX1Q86UT6 975 aa16.95■□□□□ 0.3
MBD1-203ENST00000339998 EIF3CQ99613 913 aaKnown RBP16.95■□□□□ 0.3
MBD1-203ENST00000339998 CBWD1Q9BRT8 395 aa16.95■□□□□ 0.3
MBD1-203ENST00000339998 ADARB2Q9NS39 739 aaKnown RBP16.95■□□□□ 0.3
MBD1-203ENST00000339998 TBC1D22BQ9NU19 505 aa16.95■□□□□ 0.3
MBD1-203ENST00000339998 PON1P27169 355 aa16.95■□□□□ 0.3
MBD1-203ENST00000339998 CCND2P30279 289 aa16.95■□□□□ 0.3
MBD1-203ENST00000339998 DLG4P78352 724 aa16.95■□□□□ 0.3
MBD1-203ENST00000339998 SEPT14Q6ZU15 432 aa16.95■□□□□ 0.3
MBD1-203ENST00000339998 FAM186BQ8IYM0 893 aa16.95■□□□□ 0.3
MBD1-203ENST00000339998 NSUN6Q8TEA1 469 aaKnown RBP16.95■□□□□ 0.3
MBD1-203ENST00000339998 PSMB7Q99436 277 aa16.95■□□□□ 0.3
MBD1-203ENST00000339998 IFIH1Q9BYX4 1025 aaKnown RBP16.95■□□□□ 0.3
MBD1-203ENST00000339998 GANQ9H2C0 597 aa16.95■□□□□ 0.3
MBD1-203ENST00000339998 PDCL3Q9H2J4 239 aa16.95■□□□□ 0.3
MBD1-203ENST00000339998 ACAD9Q9H845 621 aa16.95■□□□□ 0.3
MBD1-203ENST00000339998 PCDHA13Q9Y5I0 950 aa16.95■□□□□ 0.3
MBD1-203ENST00000339998 CAPN6Q9Y6Q1 641 aa16.95■□□□□ 0.3
MBD1-203ENST00000339998 EPB41P11171 864 aaKnown RBP16.95■□□□□ 0.3
MBD1-203ENST00000339998 KCNA2P16389 499 aa16.95■□□□□ 0.3
MBD1-203ENST00000339998 GUCY2CP25092 1073 aa16.95■□□□□ 0.3
MBD1-203ENST00000339998 CBWD6Q4V339 395 aa16.95■□□□□ 0.3
MBD1-203ENST00000339998 CBWD3Q5JTY5 395 aa16.95■□□□□ 0.3
MBD1-203ENST00000339998 CBWD5Q5RIA9 395 aa16.95■□□□□ 0.3
MBD1-203ENST00000339998 NIPA1Q7RTP0 329 aa16.95■□□□□ 0.3
MBD1-203ENST00000339998 FRMD5Q7Z6J6 570 aa16.95■□□□□ 0.3
MBD1-203ENST00000339998 ANKRD35Q8N283 1001 aa16.95■□□□□ 0.3
MBD1-203ENST00000339998 NAPGQ99747 312 aaPredicted RBP16.95■□□□□ 0.3
MBD1-203ENST00000339998 GBP3Q9H0R5 595 aa16.95■□□□□ 0.3
MBD1-203ENST00000339998 RNF216Q9NWF9 866 aaPredicted RBP16.95■□□□□ 0.3
MBD1-203ENST00000339998 CEP72Q9P209 647 aa16.95■□□□□ 0.3
MBD1-203ENST00000339998 GOLGA8IPA6NC78 632 aa16.94■□□□□ 0.3
MBD1-203ENST00000339998 GOLGA8JA6NMD2 632 aa16.94■□□□□ 0.3
MBD1-203ENST00000339998 MOCS3O95396 460 aa16.94■□□□□ 0.3
MBD1-203ENST00000339998 HNRNPH3P31942 346 aaKnown RBP16.94■□□□□ 0.3
MBD1-203ENST00000339998 EXOC3L4Q17RC7 722 aa16.94■□□□□ 0.3
MBD1-203ENST00000339998 FOXR2Q6PJQ5 311 aa16.94■□□□□ 0.3
MBD1-203ENST00000339998 CCDC60Q8IWA6 550 aaPredicted RBP16.94■□□□□ 0.3
MBD1-203ENST00000339998 RBM46Q8TBY0 533 aaKnown RBP16.94■□□□□ 0.3
MBD1-203ENST00000339998 CAPZA3Q96KX2 299 aa16.94■□□□□ 0.3
MBD1-203ENST00000339998 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.94■□□□□ 0.3
MBD1-203ENST00000339998 HAUS4Q9H6D7 363 aa16.94■□□□□ 0.3
MBD1-203ENST00000339998 HOXC10Q9NYD6 342 aa16.94■□□□□ 0.3
MBD1-203ENST00000339998 ADAMTS1Q9UHI8 967 aa16.94■□□□□ 0.3
MBD1-203ENST00000339998 WDR64B1ANS9 1081 aa16.94■□□□□ 0.3
MBD1-203ENST00000339998 ZNF185O15231 689 aa16.94■□□□□ 0.3
MBD1-203ENST00000339998 BUB1O43683 1085 aa16.94■□□□□ 0.3
MBD1-203ENST00000339998 IPO7O95373 1038 aaKnown RBP16.94■□□□□ 0.3
MBD1-203ENST00000339998 ZSCAN20P17040 1043 aaPredicted RBP16.94■□□□□ 0.3
MBD1-203ENST00000339998 KRT83P78385 493 aa16.94■□□□□ 0.3
MBD1-203ENST00000339998 SPA17Q15506 151 aa16.94■□□□□ 0.3
MBD1-203ENST00000339998 SFMBT2Q5VUG0 894 aa16.94■□□□□ 0.3
MBD1-203ENST00000339998 BORCS6Q96GS4 357 aa16.94■□□□□ 0.3
MBD1-203ENST00000339998 INPP4AQ96PE3 977 aaPredicted RBP16.94■□□□□ 0.3
MBD1-203ENST00000339998 PACSIN1Q9BY11 444 aa16.94■□□□□ 0.3
MBD1-203ENST00000339998 GCNT4Q9P109 453 aa16.94■□□□□ 0.3
MBD1-203ENST00000339998 ODF2LQ9ULJ1 636 aa16.94■□□□□ 0.3
MBD1-203ENST00000339998 CSADQ9Y600 493 aa16.94■□□□□ 0.3
MBD1-203ENST00000339998 DNAH12Q6ZR08 3092 aa16.93■□□□□ 0.3
MBD1-203ENST00000339998 EAPPQ56P03 285 aaPredicted RBP16.93■□□□□ 0.3
MBD1-203ENST00000339998 CYFIP1Q7L576 1253 aa16.93■□□□□ 0.3
MBD1-203ENST00000339998 NCAPG2Q86XI2 1143 aa16.93■□□□□ 0.3
MBD1-203ENST00000339998 CCDC170Q8IYT3 715 aa16.93■□□□□ 0.3
MBD1-203ENST00000339998 BSNDQ8WZ55 320 aa16.93■□□□□ 0.3
MBD1-203ENST00000339998 DICER1Q9UPY3 1922 aaKnown RBP16.93■□□□□ 0.3
MBD1-203ENST00000339998 CCDC169A6NNP5 214 aa16.93■□□□□ 0.3
MBD1-203ENST00000339998 PPP1R12BO60237 982 aaPredicted RBP16.93■□□□□ 0.3
MBD1-203ENST00000339998 EXOC3O60645 756 aa16.93■□□□□ 0.3
MBD1-203ENST00000339998 UCHL3P15374 230 aa16.93■□□□□ 0.3
MBD1-203ENST00000339998 RPL13P26373 211 aaKnown RBP16.93■□□□□ 0.3
MBD1-203ENST00000339998 PSMC5P62195 406 aa16.93■□□□□ 0.3
MBD1-203ENST00000339998 MOV10L1Q9BXT6 1211 aaKnown RBP16.93■□□□□ 0.3
MBD1-203ENST00000339998 CDC23Q9UJX2 597 aa16.93■□□□□ 0.3
MBD1-203ENST00000339998 A0A087X0T9 212 aa16.92■□□□□ 0.3
MBD1-203ENST00000339998 EIF3DO15371 548 aaKnown RBP eCLIP16.92■□□□□ 0.3
MBD1-203ENST00000339998 PPP1R37O75864 691 aa16.92■□□□□ 0.3
MBD1-203ENST00000339998 FAM228BP0C875 321 aa16.92■□□□□ 0.3
MBD1-203ENST00000339998 VAV2P52735 878 aa16.92■□□□□ 0.3
MBD1-203ENST00000339998 PTPROQ16827 1216 aa16.92■□□□□ 0.3
MBD1-203ENST00000339998 ASTE1Q2TB18 679 aaPredicted RBP16.92■□□□□ 0.3
MBD1-203ENST00000339998 NOL9Q5SY16 702 aaKnown RBP16.92■□□□□ 0.3
MBD1-203ENST00000339998 HS2ST1Q7LGA3 356 aa16.92■□□□□ 0.3
MBD1-203ENST00000339998 TEX2Q8IWB9 1127 aa16.92■□□□□ 0.3
MBD1-203ENST00000339998 HINFPQ9BQA5 517 aa16.92■□□□□ 0.3
MBD1-203ENST00000339998 ZNF446Q9NWS9 450 aa16.92■□□□□ 0.3
MBD1-203ENST00000339998 FAM184BQ9ULE4 1060 aa16.92■□□□□ 0.3
MBD1-203ENST00000339998 PCDHA10Q9Y5I2 948 aa16.92■□□□□ 0.3
MBD1-203ENST00000339998 BRCA2P51587 3418 aa16.92■□□□□ 0.3
MBD1-203ENST00000339998 SEC31AO94979 1220 aaKnown RBP16.92■□□□□ 0.3
MBD1-203ENST00000339998 PGK2P07205 417 aa16.92■□□□□ 0.3
MBD1-203ENST00000339998 POTEJP0CG39 1038 aa16.92■□□□□ 0.3
MBD1-203ENST00000339998 MAGEA1P43355 309 aa16.92■□□□□ 0.3
MBD1-203ENST00000339998 DNA2P51530 1060 aa16.92■□□□□ 0.3
MBD1-203ENST00000339998 CBX1P83916 185 aa16.92■□□□□ 0.3
MBD1-203ENST00000339998 KLHDC7AQ5VTJ3 777 aa16.92■□□□□ 0.3
MBD1-203ENST00000339998 HAUS6Q7Z4H7 955 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms