RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 IRF2BP1Q8IU81 584 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 EXOC8Q8IYI6 725 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 CCDC82Q8N4S0 544 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 TTLL11Q8NHH1 800 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 NKX2-3Q8TAU0 364 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 MORC4Q8TE76 937 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 SLC7A5P2Q9GIP4 190 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 DRC3Q9H069 523 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 ARMC7Q9H6L4 198 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 BTBD7Q9P203 1132 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 ARHGAP20Q9P2F6 1191 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 STOML1Q9UBI4 398 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 HESX1Q9UBX0 185 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 LAMA4Q16363 1823 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 CRB1P82279 1406 aa10.42□□□□□ -0.74
PTCHD4-201ENST00000339488 XRN1Q8IZH2 1706 aaKnown RBP10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 PI4KAP2A4QPH2 592 aa10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 E7ENQ6 273 aa10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 EPHB6O15197 1021 aa10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 XPOTO43592 962 aaKnown RBP10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 POTEJP0CG39 1038 aa10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 TROVE2P10155 538 aaKnown RBP eCLIP10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 STIP1P31948 543 aaKnown RBP10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 TXKP42681 527 aa10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 CDK7P50613 346 aa10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 KCNMA1Q12791 1236 aa10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 CLPPQ16740 277 aaPredicted RBP10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 PI4KAP1Q8N8J0 262 aa10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 CRAMP1Q96RY5 1269 aa10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 MIS12Q9H081 205 aa10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 KRT82Q9NSB4 513 aa10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 ATAD3AQ9NVI7 634 aa10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 ARL2BPQ9Y2Y0 163 aa10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 FAM205CA6NFA0 338 aa10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 SFI1A8K8P3 1242 aa10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 RGS16O15492 202 aaPredicted RBP10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 TTI1O43156 1089 aa10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 ADCY3O60266 1144 aa10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 HARSP12081 509 aaKnown RBP10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 COPB2P35606 906 aa10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 NAA20P61599 178 aa10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 CAMK2BQ13554 666 aa10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 KPNB1Q14974 876 aaKnown RBP10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 R3HDM1Q15032 1099 aaKnown RBP10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 MEA1Q16626 185 aa10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 KLC3Q6P597 504 aa10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 C1orf228Q6PIY5 440 aa10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 INTS8Q75QN2 995 aaKnown RBP10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 MPHOSPH6Q99547 160 aaKnown RBP10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 TCP11L1Q9NUJ3 509 aa10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 PALLDQ8WX93 1383 aa10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 ABCC12Q96J65 1359 aa10.41□□□□□ -0.74
PTCHD4-201ENST00000339488 SH2B2O14492 632 aaPredicted RBP10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 MAP2P11137 1827 aaKnown RBP10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 PORP16435 677 aaPredicted RBP10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 RCVRNP35243 200 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 KPNA1P52294 538 aaPredicted RBP10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 COG7P83436 770 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 PAK1Q13153 545 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 NR5A1Q13285 461 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 CNGA2Q16280 664 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 LRRC36Q1X8D7 754 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 IZUMO2Q6UXV1 221 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 MICU3Q86XE3 530 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 GAB3Q8WWW8 586 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 LZICQ8WZA0 190 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 CENPTQ96BT3 561 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 KIF20BQ96Q89 1820 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 PPP1R10Q96QC0 940 aaKnown RBP10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 CYTH2Q99418 400 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 AASDHPPTQ9NRN7 309 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 EURLQ9NYK6 297 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 KIAA1522Q9P206 1035 aaPredicted RBP10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 PRELID1Q9Y255 219 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 MYH6P13533 1939 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 MST1RQ04912 1400 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 TSPY2A6NKD2 308 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 KCNK3O14649 394 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 ADAM23O75077 832 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 USP1O94782 785 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 TSPY3P0CV98 308 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 TSPY8P0CW00 308 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 MAGEA1P43355 309 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 TRPC1P48995 793 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 TSPY1Q01534 308 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 FOXD4Q12950 439 aaPredicted RBP10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 GIT2Q14161 759 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 MCMDC2Q4G0Z9 681 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 ACSBG2Q5FVE4 666 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 ADAT2Q7Z6V5 191 aaKnown RBP10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 SPATA20Q8TB22 786 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 DQX1Q8TE96 717 aaKnown RBP10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 AGXT2Q9BYV1 514 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 ASCC2Q9H1I8 757 aaPredicted RBP10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 TPK1Q9H3S4 243 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 FAM207AQ9NSI2 230 aaPredicted RBP10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 PRKAG3Q9UGI9 489 aa10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 ARHGEF28Q8N1W1 1705 aaKnown RBP10.4□□□□□ -0.74
PTCHD4-201ENST00000339488 BCL9O00512 1426 aa10.4□□□□□ -0.75
PTCHD4-201ENST00000339488 PLEKHG1Q9ULL1 1385 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms