RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 CCDC43Q96MW1 224 aaKnown RBP14.35□□□□□ -0.11
SRSF3-201ENST00000339436 DHX33Q9H6R0 707 aaKnown RBP14.35□□□□□ -0.11
SRSF3-201ENST00000339436 KDM3AQ9Y4C1 1321 aa14.34□□□□□ -0.11
SRSF3-201ENST00000339436 CXCL10P02778 98 aa14.34□□□□□ -0.11
SRSF3-201ENST00000339436 ACRP10323 421 aa14.34□□□□□ -0.11
SRSF3-201ENST00000339436 XRCC6P12956 609 aaKnown RBP eCLIP14.34□□□□□ -0.11
SRSF3-201ENST00000339436 TMOD1P28289 359 aa14.34□□□□□ -0.11
SRSF3-201ENST00000339436 POLGP54098 1239 aaPredicted RBP14.34□□□□□ -0.11
SRSF3-201ENST00000339436 TMEM62Q0P6H9 643 aa14.34□□□□□ -0.11
SRSF3-201ENST00000339436 EMC2Q15006 297 aa14.34□□□□□ -0.11
SRSF3-201ENST00000339436 STK38Q15208 465 aa14.34□□□□□ -0.11
SRSF3-201ENST00000339436 IER5Q5VY09 327 aa14.34□□□□□ -0.11
SRSF3-201ENST00000339436 ATL3Q6DD88 541 aa14.34□□□□□ -0.11
SRSF3-201ENST00000339436 C16orf59Q7L2K0 433 aa14.34□□□□□ -0.11
SRSF3-201ENST00000339436 DEFB128Q7Z7B8 93 aa14.34□□□□□ -0.11
SRSF3-201ENST00000339436 NME8Q8N427 588 aa14.34□□□□□ -0.11
SRSF3-201ENST00000339436 NACC1Q96RE7 527 aa14.34□□□□□ -0.11
SRSF3-201ENST00000339436 MAP7D2Q96T17 732 aa14.34□□□□□ -0.11
SRSF3-201ENST00000339436 JPH2Q9BR39 696 aaPredicted RBP14.34□□□□□ -0.11
SRSF3-201ENST00000339436 DDX19AQ9NUU7 478 aaKnown RBP14.34□□□□□ -0.11
SRSF3-201ENST00000339436 DAXXQ9UER7 740 aaPredicted RBP14.34□□□□□ -0.11
SRSF3-201ENST00000339436 DBR1Q9UK59 544 aaKnown RBP14.34□□□□□ -0.11
SRSF3-201ENST00000339436 COLQQ9Y215 455 aaPredicted RBP14.34□□□□□ -0.11
SRSF3-201ENST00000339436 SRPRBQ9Y5M8 271 aaKnown RBP14.34□□□□□ -0.11
SRSF3-201ENST00000339436 TRPV2Q9Y5S1 764 aa14.34□□□□□ -0.11
SRSF3-201ENST00000339436 CDY2AQ9Y6F7 541 aa14.34□□□□□ -0.11
SRSF3-201ENST00000339436 A0A1W2PPC1 479 aa14.33□□□□□ -0.12
SRSF3-201ENST00000339436 M0QZ92 97 aa14.33□□□□□ -0.12
SRSF3-201ENST00000339436 VTNP04004 478 aa14.33□□□□□ -0.12
SRSF3-201ENST00000339436 DNM1Q05193 864 aaKnown RBP14.33□□□□□ -0.12
SRSF3-201ENST00000339436 MKRN4PQ13434 485 aaPredicted RBP14.33□□□□□ -0.12
SRSF3-201ENST00000339436 DRP2Q13474 957 aa14.33□□□□□ -0.12
SRSF3-201ENST00000339436 TMEM240Q5SV17 173 aa14.33□□□□□ -0.12
SRSF3-201ENST00000339436 C9orf50Q5SZB4 431 aa14.33□□□□□ -0.12
SRSF3-201ENST00000339436 HYIQ5T013 277 aa14.33□□□□□ -0.12
SRSF3-201ENST00000339436 EXOC8Q8IYI6 725 aa14.33□□□□□ -0.12
SRSF3-201ENST00000339436 RPUSD2Q8IZ73 545 aaKnown RBP14.33□□□□□ -0.12
SRSF3-201ENST00000339436 TDHQ8IZJ6 230 aa14.33□□□□□ -0.12
SRSF3-201ENST00000339436 KRI1Q8N9T8 703 aaKnown RBP14.33□□□□□ -0.12
SRSF3-201ENST00000339436 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.33□□□□□ -0.123e-7■■□□□ 11.4
SRSF3-201ENST00000339436 SUGCTQ9HAC7 445 aa14.33□□□□□ -0.12
SRSF3-201ENST00000339436 BMP2KQ9NSY1 1161 aaPredicted RBP14.33□□□□□ -0.12
SRSF3-201ENST00000339436 TFIP11Q9UBB9 837 aaKnown RBP14.33□□□□□ -0.12
SRSF3-201ENST00000339436 KIAA1024Q9UPX6 916 aa14.33□□□□□ -0.12
SRSF3-201ENST00000339436 AKT3Q9Y243 479 aa14.33□□□□□ -0.12
SRSF3-201ENST00000339436 TTC3P53804 2025 aa14.33□□□□□ -0.12
SRSF3-201ENST00000339436 MYO9BQ13459 2157 aa14.33□□□□□ -0.12
SRSF3-201ENST00000339436 A0A087WWV3 80 aa14.32□□□□□ -0.12
SRSF3-201ENST00000339436 SPTLC2O15270 562 aa14.32□□□□□ -0.12
SRSF3-201ENST00000339436 SLC26A4O43511 780 aa14.32□□□□□ -0.12
SRSF3-201ENST00000339436 GAS2O43903 313 aaKnown RBP14.32□□□□□ -0.12
SRSF3-201ENST00000339436 PPP6R2O75170 966 aa14.32□□□□□ -0.12
SRSF3-201ENST00000339436 DGAT1O75907 488 aa14.32□□□□□ -0.12
SRSF3-201ENST00000339436 NUCB2P80303 420 aa14.32□□□□□ -0.12
SRSF3-201ENST00000339436 TMEM119Q4V9L6 283 aa14.32□□□□□ -0.12
SRSF3-201ENST00000339436 CABP7Q86V35 215 aa14.32□□□□□ -0.12
SRSF3-201ENST00000339436 OSBPL7Q9BZF2 842 aa14.32□□□□□ -0.12
SRSF3-201ENST00000339436 CSRNP2Q9H175 543 aa14.32□□□□□ -0.12
SRSF3-201ENST00000339436 ATP6V0A4Q9HBG4 840 aa14.32□□□□□ -0.12
SRSF3-201ENST00000339436 XPNPEP1Q9NQW7 623 aa14.32□□□□□ -0.12
SRSF3-201ENST00000339436 CHD7Q9P2D1 2997 aa14.32□□□□□ -0.12
SRSF3-201ENST00000339436 RBAK-RBAKDNI3L0D1 243 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 GHRP10912 638 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 UBA7P41226 1012 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 GRB10Q13322 594 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 LPIN1Q14693 890 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 SHHQ15465 462 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 ZRSR1Q15695 479 aaKnown RBP14.31□□□□□ -0.12
SRSF3-201ENST00000339436 PLEKHG4Q58EX7 1191 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 FBXO47Q5MNV8 452 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 ZNF365Q70YC5 407 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 KCNK18Q7Z418 384 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 ZNF710Q8N1W2 664 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 KCNG4Q8TDN1 519 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 CDK5RAP3Q96JB5 506 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 CLIC6Q96NY7 704 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 PNMA5Q96PV4 448 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 PPP1R16BQ96T49 567 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 MTRQ99707 1265 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 CELF4Q9BZC1 486 aaKnown RBP14.31□□□□□ -0.12
SRSF3-201ENST00000339436 NT5C3AQ9H0P0 336 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 BHMT2Q9H2M3 363 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 CFAP45Q9UL16 551 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 ATP6V1DQ9Y5K8 247 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 CHD9Q3L8U1 2897 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 ARHGEF35A5YM69 484 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 USO1O60763 962 aaKnown RBP14.31□□□□□ -0.12
SRSF3-201ENST00000339436 GPR32O75388 356 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 DNM2P50570 870 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 GPC3P51654 580 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 KRT85P78386 507 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 KIZQ2M2Z5 673 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 CNKSR3Q6P9H4 555 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 TSHZ1Q6ZSZ6 1077 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 KCTD17Q8N5Z5 321 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 SYMPKQ92797 1274 aaKnown RBP14.31□□□□□ -0.12
SRSF3-201ENST00000339436 CHAMP1Q96JM3 812 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 RNPC3Q96LT9 517 aaKnown RBP14.31□□□□□ -0.12
SRSF3-201ENST00000339436 CCSER1Q9C0I3 900 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 SUCLA2Q9P2R7 463 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms