RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 MCUR1Q96AQ8 359 aa10.04□□□□□ -0.8
RPGR-202ENST00000339363 RNF26Q9BY78 433 aaPredicted RBP10.04□□□□□ -0.8
RPGR-202ENST00000339363 TIAM2Q8IVF5 1701 aa10.04□□□□□ -0.8
RPGR-202ENST00000339363 PAPPAQ13219 1627 aa10.04□□□□□ -0.8
RPGR-202ENST00000339363 GSTA2P09210 222 aa10.04□□□□□ -0.8
RPGR-202ENST00000339363 PLTPP55058 493 aa10.04□□□□□ -0.8
RPGR-202ENST00000339363 TMEM62Q0P6H9 643 aa10.04□□□□□ -0.8
RPGR-202ENST00000339363 ERMARDQ5T6L9 678 aa10.04□□□□□ -0.8
RPGR-202ENST00000339363 TMTC3Q6ZXV5 915 aa10.04□□□□□ -0.8
RPGR-202ENST00000339363 ARHGAP18Q8N392 663 aa10.04□□□□□ -0.8
RPGR-202ENST00000339363 SLC44A5Q8NCS7 719 aa10.04□□□□□ -0.8
RPGR-202ENST00000339363 DYNLL2Q96FJ2 89 aa10.04□□□□□ -0.8
RPGR-202ENST00000339363 FMO2Q99518 471 aa10.04□□□□□ -0.8
RPGR-202ENST00000339363 RNPEPL1Q9HAU8 725 aa10.04□□□□□ -0.8
RPGR-202ENST00000339363 AMACRQ9UHK6 382 aa10.04□□□□□ -0.8
RPGR-202ENST00000339363 TXNDC9O14530 226 aa10.03□□□□□ -0.8
RPGR-202ENST00000339363 BAG2O95816 211 aa10.03□□□□□ -0.8
RPGR-202ENST00000339363 GNAQP50148 359 aa10.03□□□□□ -0.8
RPGR-202ENST00000339363 NKX1-1Q15270 411 aaPredicted RBP10.03□□□□□ -0.8
RPGR-202ENST00000339363 IFIT1BQ5T764 474 aaKnown RBP10.03□□□□□ -0.8
RPGR-202ENST00000339363 ZNF658Q5TYW1 1059 aaPredicted RBP10.03□□□□□ -0.8
RPGR-202ENST00000339363 FAM133AQ8N9E0 248 aa10.03□□□□□ -0.8
RPGR-202ENST00000339363 MTMR8Q96EF0 704 aa10.03□□□□□ -0.8
RPGR-202ENST00000339363 FGFBP2Q9BYJ0 223 aa10.03□□□□□ -0.8
RPGR-202ENST00000339363 TSPYL2Q9H2G4 693 aaPredicted RBP10.03□□□□□ -0.8
RPGR-202ENST00000339363 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.03□□□□□ -0.8
RPGR-202ENST00000339363 SLC12A4Q9UP95 1085 aa10.03□□□□□ -0.8
RPGR-202ENST00000339363 C5orf60A6NFR6 353 aa10.03□□□□□ -0.8
RPGR-202ENST00000339363 ASAP2O43150 1006 aa10.03□□□□□ -0.8
RPGR-202ENST00000339363 SART1O43290 800 aaKnown RBP10.03□□□□□ -0.8
RPGR-202ENST00000339363 MAP3K7O43318 606 aa10.03□□□□□ -0.8
RPGR-202ENST00000339363 GNAT2P19087 354 aa10.03□□□□□ -0.8
RPGR-202ENST00000339363 PTDSS1P48651 473 aaKnown RBP10.03□□□□□ -0.8
RPGR-202ENST00000339363 ERVK-9P63128 1117 aa10.03□□□□□ -0.8
RPGR-202ENST00000339363 ITIH3Q06033 890 aa10.03□□□□□ -0.8
RPGR-202ENST00000339363 CHRNDQ07001 517 aa10.03□□□□□ -0.8
RPGR-202ENST00000339363 CBX3Q13185 183 aa10.03□□□□□ -0.8
RPGR-202ENST00000339363 GRIK5Q16478 980 aa10.03□□□□□ -0.8
RPGR-202ENST00000339363 GRAMD4Q6IC98 578 aa10.03□□□□□ -0.8
RPGR-202ENST00000339363 TXNRD3Q86VQ6 643 aa10.03□□□□□ -0.8
RPGR-202ENST00000339363 STK32AQ8WU08 396 aa10.03□□□□□ -0.8
RPGR-202ENST00000339363 IQCDQ96DY2 449 aa10.03□□□□□ -0.8
RPGR-202ENST00000339363 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.03□□□□□ -0.8
RPGR-202ENST00000339363 ISCUQ9H1K1 167 aa10.03□□□□□ -0.8
RPGR-202ENST00000339363 IL17RBQ9NRM6 502 aa10.03□□□□□ -0.8
RPGR-202ENST00000339363 PARP4Q9UKK3 1724 aaKnown RBP10.03□□□□□ -0.8
RPGR-202ENST00000339363 DOCK2Q92608 1830 aa10.03□□□□□ -0.8
RPGR-202ENST00000339363 A0A1W2PRG0 241 aa10.03□□□□□ -0.8
RPGR-202ENST00000339363 RARAP10276 462 aa10.03□□□□□ -0.8
RPGR-202ENST00000339363 IL2RBP14784 551 aa10.03□□□□□ -0.8
RPGR-202ENST00000339363 BYSLQ13895 437 aaKnown RBP10.03□□□□□ -0.8
RPGR-202ENST00000339363 LBRQ14739 615 aaKnown RBP10.03□□□□□ -0.8
RPGR-202ENST00000339363 CCDC174Q6PII3 467 aa10.03□□□□□ -0.8
RPGR-202ENST00000339363 VPS52Q8N1B4 723 aa10.03□□□□□ -0.8
RPGR-202ENST00000339363 ANKRD27Q96NW4 1050 aa10.03□□□□□ -0.8
RPGR-202ENST00000339363 NAP1L3Q99457 506 aaPredicted RBP10.03□□□□□ -0.8
RPGR-202ENST00000339363 NKIRAS1Q9NYS0 192 aa10.03□□□□□ -0.8
RPGR-202ENST00000339363 NKX1-2Q9UD57 310 aaPredicted RBP10.03□□□□□ -0.8
RPGR-202ENST00000339363 ARL2BPQ9Y2Y0 163 aa10.03□□□□□ -0.8
RPGR-202ENST00000339363 COL5A2P05997 1499 aaPredicted RBP10.03□□□□□ -0.8
RPGR-202ENST00000339363 USP17L3A6NCW0 530 aa10.02□□□□□ -0.8
RPGR-202ENST00000339363 USP17L4A6NCW7 530 aa10.02□□□□□ -0.8
RPGR-202ENST00000339363 MAP3K13O43283 966 aa10.02□□□□□ -0.8
RPGR-202ENST00000339363 PRPF3O43395 683 aaKnown RBP10.02□□□□□ -0.8
RPGR-202ENST00000339363 TARSP26639 723 aaKnown RBP10.02□□□□□ -0.8
RPGR-202ENST00000339363 EIF3BP55884 814 aaKnown RBP10.02□□□□□ -0.8
RPGR-202ENST00000339363 PDE1CQ14123 709 aaPredicted RBP10.02□□□□□ -0.8
RPGR-202ENST00000339363 IRGCQ6NXR0 463 aa10.02□□□□□ -0.8
RPGR-202ENST00000339363 USP17L1Q7RTZ2 530 aa10.02□□□□□ -0.8
RPGR-202ENST00000339363 MREGQ8N565 214 aa10.02□□□□□ -0.8
RPGR-202ENST00000339363 NEK9Q8TD19 979 aa10.02□□□□□ -0.8
RPGR-202ENST00000339363 NMD3Q96D46 503 aaKnown RBP10.02□□□□□ -0.8
RPGR-202ENST00000339363 TRAPPC9Q96Q05 1148 aa10.02□□□□□ -0.8
RPGR-202ENST00000339363 TMEM237Q96Q45 408 aa10.02□□□□□ -0.8
RPGR-202ENST00000339363 IWS1Q96ST2 819 aa10.02□□□□□ -0.8
RPGR-202ENST00000339363 TLR10Q9BXR5 811 aa10.02□□□□□ -0.8
RPGR-202ENST00000339363 ZMYND12Q9H0C1 365 aa10.02□□□□□ -0.8
RPGR-202ENST00000339363 SEMA6BQ9H3T3 888 aa10.02□□□□□ -0.8
RPGR-202ENST00000339363 DAAM1Q9Y4D1 1078 aa10.02□□□□□ -0.8
RPGR-202ENST00000339363 PDE8AO60658 829 aa10.02□□□□□ -0.81
RPGR-202ENST00000339363 EEF1GP26641 437 aaKnown RBP10.02□□□□□ -0.81
RPGR-202ENST00000339363 CCNFP41002 786 aa10.02□□□□□ -0.81
RPGR-202ENST00000339363 SLC1A4P43007 532 aa10.02□□□□□ -0.81
RPGR-202ENST00000339363 SH3BGRP55822 239 aaPredicted RBP10.02□□□□□ -0.81
RPGR-202ENST00000339363 RAPGEF1Q13905 1077 aa10.02□□□□□ -0.81
RPGR-202ENST00000339363 RFX8Q6ZV50 586 aa10.02□□□□□ -0.81
RPGR-202ENST00000339363 NANOGNBQ7Z5D8 188 aa10.02□□□□□ -0.81
RPGR-202ENST00000339363 DZIP3Q86Y13 1208 aaKnown RBP10.02□□□□□ -0.81
RPGR-202ENST00000339363 SCYL3Q8IZE3 742 aa10.02□□□□□ -0.81
RPGR-202ENST00000339363 KIAA0895Q8NCT3 520 aa10.02□□□□□ -0.81
RPGR-202ENST00000339363 FERMT2Q96AC1 680 aa10.02□□□□□ -0.81
RPGR-202ENST00000339363 CNOT6LQ96LI5 555 aaKnown RBP10.02□□□□□ -0.81
RPGR-202ENST00000339363 SLC4A7Q9Y6M7 1214 aa10.02□□□□□ -0.81
RPGR-202ENST00000339363 CACNA1SQ13698 1873 aa10.02□□□□□ -0.81
RPGR-202ENST00000339363 MAGEA13PA6NCF6 341 aa10.02□□□□□ -0.81
RPGR-202ENST00000339363 VIL1P09327 827 aaKnown RBP10.02□□□□□ -0.81
RPGR-202ENST00000339363 PRLRP16471 622 aa10.02□□□□□ -0.81
RPGR-202ENST00000339363 PRDX5P30044 214 aa10.02□□□□□ -0.81
RPGR-202ENST00000339363 SLC9C1Q4G0N8 1177 aa10.02□□□□□ -0.81
RPGR-202ENST00000339363 CCDC65Q8IXS2 484 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms