RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 CDK5RAP3Q96JB5 506 aa18.66■□□□□ 0.58
SFN-201ENST00000339276 SUGCTQ9HAC7 445 aa18.66■□□□□ 0.58
SFN-201ENST00000339276 PCDHA7Q9UN72 937 aa18.66■□□□□ 0.58
SFN-201ENST00000339276 LOXHD1Q8IVV2 1947 aa18.66■□□□□ 0.58
SFN-201ENST00000339276 IGKV6-21A0A0C4DH24 114 aa18.65■□□□□ 0.58
SFN-201ENST00000339276 CUTAO60888 179 aa18.65■□□□□ 0.58
SFN-201ENST00000339276 SELPP16109 830 aa18.65■□□□□ 0.58
SFN-201ENST00000339276 RFC5P40937 340 aa18.65■□□□□ 0.58
SFN-201ENST00000339276 POLGP54098 1239 aaPredicted RBP18.65■□□□□ 0.58
SFN-201ENST00000339276 TMEM62Q0P6H9 643 aa18.65■□□□□ 0.58
SFN-201ENST00000339276 MKRN4PQ13434 485 aaPredicted RBP18.65■□□□□ 0.58
SFN-201ENST00000339276 DRP2Q13474 957 aa18.65■□□□□ 0.58
SFN-201ENST00000339276 MFSD5Q6N075 450 aa18.65■□□□□ 0.58
SFN-201ENST00000339276 RPAINQ86UA6 219 aa18.65■□□□□ 0.58
SFN-201ENST00000339276 RSPH3Q86UC2 560 aa18.65■□□□□ 0.58
SFN-201ENST00000339276 LRRC15Q8TF66 581 aa18.65■□□□□ 0.58
SFN-201ENST00000339276 CALML4Q96GE6 196 aa18.65■□□□□ 0.58
SFN-201ENST00000339276 CCSER1Q9C0I3 900 aa18.65■□□□□ 0.58
SFN-201ENST00000339276 NT5C3AQ9H0P0 336 aa18.65■□□□□ 0.58
SFN-201ENST00000339276 DHX33Q9H6R0 707 aaKnown RBP18.65■□□□□ 0.58
SFN-201ENST00000339276 GDPD2Q9HCC8 539 aa18.65■□□□□ 0.58
SFN-201ENST00000339276 PPME1Q9Y570 386 aa18.65■□□□□ 0.58
SFN-201ENST00000339276 CEP290O15078 2479 aa18.64■□□□□ 0.58
SFN-201ENST00000339276 ARHGEF35A5YM69 484 aa18.64■□□□□ 0.57
SFN-201ENST00000339276 SLC26A4O43511 780 aa18.64■□□□□ 0.57
SFN-201ENST00000339276 USO1O60763 962 aaKnown RBP18.64■□□□□ 0.57
SFN-201ENST00000339276 CAND2O75155 1236 aa18.64■□□□□ 0.57
SFN-201ENST00000339276 IQCF3P0C7M6 154 aa18.64■□□□□ 0.57
SFN-201ENST00000339276 PLCG1P19174 1290 aa18.64■□□□□ 0.57
SFN-201ENST00000339276 MAGEA10P43363 369 aaPredicted RBP18.64■□□□□ 0.57
SFN-201ENST00000339276 EMC2Q15006 297 aa18.64■□□□□ 0.57
SFN-201ENST00000339276 SHC4Q6S5L8 630 aa18.64■□□□□ 0.57
SFN-201ENST00000339276 RASSF8Q8NHQ8 419 aa18.64■□□□□ 0.57
SFN-201ENST00000339276 SLC7A3Q8WY07 619 aa18.64■□□□□ 0.57
SFN-201ENST00000339276 PPP1R16BQ96T49 567 aa18.64■□□□□ 0.57
SFN-201ENST00000339276 LBHD1Q9BQE6 289 aaPredicted RBP18.64■□□□□ 0.57
SFN-201ENST00000339276 SCAND2PQ9GZW5 306 aaPredicted RBP18.64■□□□□ 0.57
SFN-201ENST00000339276 BHMT2Q9H2M3 363 aa18.64■□□□□ 0.57
SFN-201ENST00000339276 XPNPEP1Q9NQW7 623 aa18.64■□□□□ 0.57
SFN-201ENST00000339276 DNM3Q9UQ16 869 aa18.64■□□□□ 0.57
SFN-201ENST00000339276 RSPH10B2B2RC85 870 aa18.63■□□□□ 0.57
SFN-201ENST00000339276 EYA4O95677 639 aa18.63■□□□□ 0.57
SFN-201ENST00000339276 CHRNA1P02708 482 aa18.63■□□□□ 0.57
SFN-201ENST00000339276 VTNP04004 478 aa18.63■□□□□ 0.57
SFN-201ENST00000339276 RSPH10BP0C881 870 aa18.63■□□□□ 0.57
SFN-201ENST00000339276 CSF2RAP15509 400 aa18.63■□□□□ 0.57
SFN-201ENST00000339276 TMOD1P28289 359 aa18.63■□□□□ 0.57
SFN-201ENST00000339276 TXLNAP40222 546 aa18.63■□□□□ 0.57
SFN-201ENST00000339276 MRPS6P82932 125 aaKnown RBP18.63■□□□□ 0.57
SFN-201ENST00000339276 MGAT3Q09327 533 aa18.63■□□□□ 0.57
SFN-201ENST00000339276 MBTPS1Q14703 1052 aa18.63■□□□□ 0.57
SFN-201ENST00000339276 TMEM199Q8N511 208 aa18.63■□□□□ 0.57
SFN-201ENST00000339276 MTRQ99707 1265 aa18.63■□□□□ 0.57
SFN-201ENST00000339276 JPH2Q9BR39 696 aaPredicted RBP18.63■□□□□ 0.57
SFN-201ENST00000339276 AKT3Q9Y243 479 aa18.63■□□□□ 0.57
SFN-201ENST00000339276 CDY2AQ9Y6F7 541 aa18.63■□□□□ 0.57
SFN-201ENST00000339276 A0A087X0B3 334 aa18.62■□□□□ 0.57
SFN-201ENST00000339276 DGAT1O75907 488 aa18.62■□□□□ 0.57
SFN-201ENST00000339276 RPLP2P05387 115 aaKnown RBP18.62■□□□□ 0.57
SFN-201ENST00000339276 FPGSQ05932 587 aa18.62■□□□□ 0.57
SFN-201ENST00000339276 GPNMBQ14956 572 aa18.62■□□□□ 0.57
SFN-201ENST00000339276 FAM26DQ5JW98 314 aa18.62■□□□□ 0.57
SFN-201ENST00000339276 PADI6Q6TGC4 694 aa18.62■□□□□ 0.57
SFN-201ENST00000339276 NME8Q8N427 588 aa18.62■□□□□ 0.57
SFN-201ENST00000339276 TMEM143Q96AN5 459 aa18.62■□□□□ 0.57
SFN-201ENST00000339276 MAP7D2Q96T17 732 aa18.62■□□□□ 0.57
SFN-201ENST00000339276 OSBPL7Q9BZF2 842 aa18.62■□□□□ 0.57
SFN-201ENST00000339276 ATP6V0A4Q9HBG4 840 aa18.62■□□□□ 0.57
SFN-201ENST00000339276 NBNO60934 754 aa18.61■□□□□ 0.57
SFN-201ENST00000339276 EPHB4P54760 987 aa18.61■□□□□ 0.57
SFN-201ENST00000339276 IER5Q5VY09 327 aa18.61■□□□□ 0.57
SFN-201ENST00000339276 DEFB128Q7Z7B8 93 aa18.61■□□□□ 0.57
SFN-201ENST00000339276 EXOC8Q8IYI6 725 aa18.61■□□□□ 0.57
SFN-201ENST00000339276 KCTD17Q8N5Z5 321 aa18.61■□□□□ 0.57
SFN-201ENST00000339276 VWCEQ96DN2 955 aa18.61■□□□□ 0.57
SFN-201ENST00000339276 ZNF668Q96K58 619 aaPredicted RBP18.61■□□□□ 0.57
SFN-201ENST00000339276 PANK2Q9BZ23 570 aa18.61■□□□□ 0.57
SFN-201ENST00000339276 BLOC1S4Q9NUP1 217 aa18.61■□□□□ 0.57
SFN-201ENST00000339276 SUCLA2Q9P2R7 463 aaPredicted RBP18.61■□□□□ 0.57
SFN-201ENST00000339276 CCDC39Q9UFE4 941 aa18.61■□□□□ 0.57
SFN-201ENST00000339276 TRPV2Q9Y5S1 764 aa18.61■□□□□ 0.57
SFN-201ENST00000339276 M0QZ92 97 aa18.6■□□□□ 0.57
SFN-201ENST00000339276 GAS2O43903 313 aaKnown RBP18.6■□□□□ 0.57
SFN-201ENST00000339276 SSBP05455 408 aaKnown RBP eCLIP18.6■□□□□ 0.57
SFN-201ENST00000339276 PLA2G4BP0C869 781 aa18.6■□□□□ 0.57
SFN-201ENST00000339276 ACRP10323 421 aa18.6■□□□□ 0.57
SFN-201ENST00000339276 DNM2P50570 870 aa18.6■□□□□ 0.57
SFN-201ENST00000339276 PPIGQ13427 754 aaKnown RBP eCLIP18.6■□□□□ 0.57
SFN-201ENST00000339276 KIZQ2M2Z5 673 aa18.6■□□□□ 0.57
SFN-201ENST00000339276 RESP18Q5W5W9 173 aa18.6■□□□□ 0.57
SFN-201ENST00000339276 MAEAQ7L5Y9 396 aa18.6■□□□□ 0.57
SFN-201ENST00000339276 RAD54LQ92698 747 aa18.6■□□□□ 0.57
SFN-201ENST00000339276 GDF15Q99988 308 aa18.6■□□□□ 0.57
SFN-201ENST00000339276 RUSC1Q9BVN2 902 aa18.6■□□□□ 0.57
SFN-201ENST00000339276 CELF4Q9BZC1 486 aaKnown RBP18.6■□□□□ 0.57
SFN-201ENST00000339276 CDHR5Q9HBB8 845 aa18.6■□□□□ 0.57
SFN-201ENST00000339276 GPRC5CQ9NQ84 441 aa18.6■□□□□ 0.57
SFN-201ENST00000339276 GINS2Q9Y248 185 aa18.6■□□□□ 0.57
SFN-201ENST00000339276 GPR32O75388 356 aa18.59■□□□□ 0.57
SFN-201ENST00000339276 CYP11B2P19099 503 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms