RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 HEMGNQ9BXL5 484 aa15.32■□□□□ 0.04
PCDH8-201ENST00000338862 NSRP1Q9H0G5 558 aaKnown RBP15.32■□□□□ 0.04
PCDH8-201ENST00000338862 ACP6Q9NPH0 428 aa15.32■□□□□ 0.04
PCDH8-201ENST00000338862 H0Y3Z8 333 aa15.32■□□□□ 0.04
PCDH8-201ENST00000338862 NOL4O94818 638 aa15.32■□□□□ 0.04
PCDH8-201ENST00000338862 PMS2P54278 862 aa15.32■□□□□ 0.04
PCDH8-201ENST00000338862 PSMD2Q13200 908 aa15.32■□□□□ 0.04
PCDH8-201ENST00000338862 KNOP1Q1ED39 458 aaKnown RBP15.32■□□□□ 0.04
PCDH8-201ENST00000338862 SEPT14Q6ZU15 432 aa15.32■□□□□ 0.04
PCDH8-201ENST00000338862 VSIG1Q86XK7 387 aa15.32■□□□□ 0.04
PCDH8-201ENST00000338862 LRRC34Q8IZ02 419 aa15.32■□□□□ 0.04
PCDH8-201ENST00000338862 PURBQ96QR8 312 aaKnown RBP15.32■□□□□ 0.04
PCDH8-201ENST00000338862 SPZ1Q9BXG8 430 aa15.32■□□□□ 0.04
PCDH8-201ENST00000338862 PPP1R9AQ9ULJ8 1098 aa15.32■□□□□ 0.04
PCDH8-201ENST00000338862 RASGRF2O14827 1237 aa15.32■□□□□ 0.04
PCDH8-201ENST00000338862 SCTRP47872 440 aa15.32■□□□□ 0.04
PCDH8-201ENST00000338862 CETN1Q12798 172 aa15.32■□□□□ 0.04
PCDH8-201ENST00000338862 COG2Q14746 738 aa15.32■□□□□ 0.04
PCDH8-201ENST00000338862 MSL3Q8N5Y2 521 aaKnown RBP15.32■□□□□ 0.04
PCDH8-201ENST00000338862 DHX36Q9H2U1 1008 aaKnown RBP15.32■□□□□ 0.04
PCDH8-201ENST00000338862 CD209Q9NNX6 404 aa15.32■□□□□ 0.04
PCDH8-201ENST00000338862 SERPINB13Q9UIV8 391 aa15.32■□□□□ 0.04
PCDH8-201ENST00000338862 CYP11B2P19099 503 aa15.31■□□□□ 0.04
PCDH8-201ENST00000338862 PON1P27169 355 aa15.31■□□□□ 0.04
PCDH8-201ENST00000338862 STX2P32856 288 aa15.31■□□□□ 0.04
PCDH8-201ENST00000338862 GCKP35557 465 aa15.31■□□□□ 0.04
PCDH8-201ENST00000338862 GCLMP48507 274 aa15.31■□□□□ 0.04
PCDH8-201ENST00000338862 CDK17Q00537 523 aa15.31■□□□□ 0.04
PCDH8-201ENST00000338862 QRICH1Q2TAL8 776 aa15.31■□□□□ 0.04
PCDH8-201ENST00000338862 SLF2Q8IX21 1173 aa15.31■□□□□ 0.04
PCDH8-201ENST00000338862 JMJD4Q9H9V9 463 aa15.31■□□□□ 0.04
PCDH8-201ENST00000338862 PNMA6FA0A0J9YX94 578 aa15.31■□□□□ 0.04
PCDH8-201ENST00000338862 CCDC169A6NNP5 214 aa15.31■□□□□ 0.04
PCDH8-201ENST00000338862 DNM1LO00429 736 aa15.31■□□□□ 0.04
PCDH8-201ENST00000338862 TTLL1O95922 423 aa15.31■□□□□ 0.04
PCDH8-201ENST00000338862 SKOR1P84550 965 aa15.31■□□□□ 0.04
PCDH8-201ENST00000338862 SHROOM1Q2M3G4 852 aaPredicted RBP15.31■□□□□ 0.04
PCDH8-201ENST00000338862 SLFN13Q68D06 897 aa15.31■□□□□ 0.04
PCDH8-201ENST00000338862 UBL4BQ8N7F7 174 aa15.31■□□□□ 0.04
PCDH8-201ENST00000338862 INPP4AQ96PE3 977 aaPredicted RBP15.31■□□□□ 0.04
PCDH8-201ENST00000338862 THAP2Q9H0W7 228 aa15.31■□□□□ 0.04
PCDH8-201ENST00000338862 SEMA4AQ9H3S1 761 aa15.31■□□□□ 0.04
PCDH8-201ENST00000338862 VCPKMTQ9H867 229 aa15.31■□□□□ 0.04
PCDH8-201ENST00000338862 FAM114A2Q9NRY5 505 aa15.31■□□□□ 0.04
PCDH8-201ENST00000338862 HOMER2Q9NSB8 354 aa15.31■□□□□ 0.04
PCDH8-201ENST00000338862 KDM3AQ9Y4C1 1321 aa15.31■□□□□ 0.04
PCDH8-201ENST00000338862 SPRED3Q2MJR0 410 aa15.31■□□□□ 0.04
PCDH8-201ENST00000338862 PROM2Q8N271 834 aa15.31■□□□□ 0.04
PCDH8-201ENST00000338862 XPO6Q96QU8 1125 aaKnown RBP15.31■□□□□ 0.04
PCDH8-201ENST00000338862 UPP2O95045 317 aa15.3■□□□□ 0.04
PCDH8-201ENST00000338862 ELF1P32519 619 aa15.3■□□□□ 0.04
PCDH8-201ENST00000338862 UAP1Q16222 522 aaPredicted RBP15.3■□□□□ 0.04
PCDH8-201ENST00000338862 EPC2Q52LR7 807 aa15.3■□□□□ 0.04
PCDH8-201ENST00000338862 FGFR1OP2Q9NVK5 253 aa15.3■□□□□ 0.04
PCDH8-201ENST00000338862 TPX2Q9ULW0 747 aaKnown RBP15.3■□□□□ 0.04
PCDH8-201ENST00000338862 WDR91A4D1P6 747 aa15.3■□□□□ 0.04
PCDH8-201ENST00000338862 TRIM37O94972 964 aa15.3■□□□□ 0.04
PCDH8-201ENST00000338862 SF3B3Q15393 1217 aaKnown RBP15.3■□□□□ 0.04
PCDH8-201ENST00000338862 KAZNQ674X7 775 aa15.3■□□□□ 0.04
PCDH8-201ENST00000338862 ZNF449Q6P9G9 518 aa15.3■□□□□ 0.04
PCDH8-201ENST00000338862 CATSPER3Q86XQ3 398 aa15.3■□□□□ 0.04
PCDH8-201ENST00000338862 TRIM59Q8IWR1 403 aa15.3■□□□□ 0.04
PCDH8-201ENST00000338862 LRRC4CQ9HCJ2 640 aa15.3■□□□□ 0.04
PCDH8-201ENST00000338862 MTMR4Q9NYA4 1195 aa15.3■□□□□ 0.04
PCDH8-201ENST00000338862 TAS2R14Q9NYV8 317 aa15.3■□□□□ 0.04
PCDH8-201ENST00000338862 MTUS1Q9ULD2 1270 aa15.3■□□□□ 0.04
PCDH8-201ENST00000338862 TCP11X1B4DZS4 312 aa15.3■□□□□ 0.04
PCDH8-201ENST00000338862 POC1B-GALNT4F8VUJ3 575 aa15.3■□□□□ 0.04
PCDH8-201ENST00000338862 FTLP02792 175 aaPredicted RBP15.3■□□□□ 0.04
PCDH8-201ENST00000338862 COL5A2P05997 1499 aaPredicted RBP15.29■□□□□ 0.04
PCDH8-201ENST00000338862 DLATP10515 647 aaKnown RBP15.29■□□□□ 0.04
PCDH8-201ENST00000338862 ADCY8P40145 1251 aa15.29■□□□□ 0.04
PCDH8-201ENST00000338862 GPSM2P81274 684 aa15.29■□□□□ 0.04
PCDH8-201ENST00000338862 BIRC3Q13489 604 aa15.29■□□□□ 0.04
PCDH8-201ENST00000338862 TRAPPC3LQ5T215 181 aa15.29■□□□□ 0.04
PCDH8-201ENST00000338862 SUGP1Q8IWZ8 645 aaKnown RBP15.29■□□□□ 0.04
PCDH8-201ENST00000338862 OSBPL7Q9BZF2 842 aa15.29■□□□□ 0.04
PCDH8-201ENST00000338862 ARHGAP4P98171 946 aa15.29■□□□□ 0.04
PCDH8-201ENST00000338862 SRRM1Q8IYB3 904 aaKnown RBP15.29■□□□□ 0.04
PCDH8-201ENST00000338862 CNPY4Q8N129 248 aa15.29■□□□□ 0.04
PCDH8-201ENST00000338862 PRPF38AQ8NAV1 312 aaKnown RBP15.29■□□□□ 0.04
PCDH8-201ENST00000338862 SLC30A5Q8TAD4 765 aa15.29■□□□□ 0.04
PCDH8-201ENST00000338862 CEP63Q96MT8 703 aa15.29■□□□□ 0.04
PCDH8-201ENST00000338862 POP1Q99575 1024 aaKnown RBP15.29■□□□□ 0.04
PCDH8-201ENST00000338862 PPP1R12CQ9BZL4 782 aa15.29■□□□□ 0.04
PCDH8-201ENST00000338862 ASPRV1Q53RT3 343 aa15.29■□□□□ 0.04
PCDH8-201ENST00000338862 CPXCR1Q8N123 301 aa15.29■□□□□ 0.04
PCDH8-201ENST00000338862 PIK3R5Q8WYR1 880 aa15.29■□□□□ 0.04
PCDH8-201ENST00000338862 PRCCQ92733 491 aaPredicted RBP15.29■□□□□ 0.04
PCDH8-201ENST00000338862 NAP1L3Q99457 506 aaPredicted RBP15.29■□□□□ 0.04
PCDH8-201ENST00000338862 PLCB1Q9NQ66 1216 aa15.29■□□□□ 0.04
PCDH8-201ENST00000338862 ARHGEF35A5YM69 484 aa15.28■□□□□ 0.04
PCDH8-201ENST00000338862 THAP12O43422 761 aa15.28■□□□□ 0.04
PCDH8-201ENST00000338862 CALCAP01258 141 aa15.28■□□□□ 0.04
PCDH8-201ENST00000338862 FERP16591 822 aa15.28■□□□□ 0.04
PCDH8-201ENST00000338862 MYL7Q01449 175 aa15.28■□□□□ 0.04
PCDH8-201ENST00000338862 PPP4R3AQ6IN85 833 aa15.28■□□□□ 0.04
PCDH8-201ENST00000338862 FUKQ8N0W3 1084 aa15.28■□□□□ 0.04
PCDH8-201ENST00000338862 HAS1Q92839 578 aa15.28■□□□□ 0.04
PCDH8-201ENST00000338862 DNAJC19Q96DA6 116 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms