RNA–Protein interactions for RNA: ENST00000338145.7

UBE2D3-202, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-202ENST00000338145 PLIN4Q96Q06 1357 aa10.93□□□□□ -0.66
UBE2D3-202ENST00000338145 LINC01553A4QN01 128 aa10.93□□□□□ -0.66
UBE2D3-202ENST00000338145 GSG1L2A8MUP6 293 aa10.93□□□□□ -0.66
UBE2D3-202ENST00000338145 B4DLN1 442 aa10.93□□□□□ -0.66
UBE2D3-202ENST00000338145 HMMRO75330 724 aa10.93□□□□□ -0.66
UBE2D3-202ENST00000338145 CXCL10P02778 98 aa10.93□□□□□ -0.66
UBE2D3-202ENST00000338145 SLC3A2P08195 630 aaKnown RBP10.93□□□□□ -0.66
UBE2D3-202ENST00000338145 ALDH5A1P51649 535 aaPredicted RBP10.93□□□□□ -0.66
UBE2D3-202ENST00000338145 MRPL12P52815 198 aaKnown RBP10.93□□□□□ -0.66
UBE2D3-202ENST00000338145 PDE4BQ07343 736 aa10.93□□□□□ -0.66
UBE2D3-202ENST00000338145 RBL2Q08999 1139 aa10.93□□□□□ -0.66
UBE2D3-202ENST00000338145 IKBKEQ14164 716 aa10.93□□□□□ -0.66
UBE2D3-202ENST00000338145 PPP2R5BQ15173 497 aa10.93□□□□□ -0.66
UBE2D3-202ENST00000338145 TIGD5Q53EQ6 642 aa10.93□□□□□ -0.66
UBE2D3-202ENST00000338145 MUM1L1Q5H9M0 696 aa10.93□□□□□ -0.66
UBE2D3-202ENST00000338145 RCSD1Q6JBY9 416 aa10.93□□□□□ -0.66
UBE2D3-202ENST00000338145 LRRC8DQ7L1W4 858 aa10.93□□□□□ -0.66
UBE2D3-202ENST00000338145 SPRED2Q7Z698 418 aa10.93□□□□□ -0.66
UBE2D3-202ENST00000338145 SESTD1Q86VW0 696 aa10.93□□□□□ -0.66
UBE2D3-202ENST00000338145 STK11IPQ8N1F8 1099 aa10.93□□□□□ -0.66
UBE2D3-202ENST00000338145 MRPL38Q96DV4 380 aaKnown RBP10.93□□□□□ -0.66
UBE2D3-202ENST00000338145 PNMA2Q9UL42 364 aa10.93□□□□□ -0.66
UBE2D3-202ENST00000338145 MTUS1Q9ULD2 1270 aa10.93□□□□□ -0.66
UBE2D3-202ENST00000338145 CCPG1Q9ULG6 757 aa10.93□□□□□ -0.66
UBE2D3-202ENST00000338145 POLIQ9UNA4 740 aa10.93□□□□□ -0.66
UBE2D3-202ENST00000338145 COL4A4P53420 1690 aaPredicted RBP10.92□□□□□ -0.66
UBE2D3-202ENST00000338145 SCN10AQ9Y5Y9 1956 aa10.92□□□□□ -0.66
UBE2D3-202ENST00000338145 MYH4Q9Y623 1939 aa10.92□□□□□ -0.66
UBE2D3-202ENST00000338145 TANC1Q9C0D5 1861 aa10.92□□□□□ -0.66
UBE2D3-202ENST00000338145 NCK2O43639 380 aa10.92□□□□□ -0.66
UBE2D3-202ENST00000338145 NDUFB5O43674 189 aa10.92□□□□□ -0.66
UBE2D3-202ENST00000338145 ICAM1P05362 532 aa10.92□□□□□ -0.66
UBE2D3-202ENST00000338145 MCCP23508 829 aa10.92□□□□□ -0.66
UBE2D3-202ENST00000338145 PLAURQ03405 335 aa10.92□□□□□ -0.66
UBE2D3-202ENST00000338145 PKN1Q16512 942 aa10.92□□□□□ -0.66
UBE2D3-202ENST00000338145 CHSY3Q70JA7 882 aa10.92□□□□□ -0.66
UBE2D3-202ENST00000338145 KRT25Q7Z3Z0 450 aa10.92□□□□□ -0.66
UBE2D3-202ENST00000338145 ADHFE1Q8IWW8 467 aa10.92□□□□□ -0.66
UBE2D3-202ENST00000338145 SCFD2Q8WU76 684 aa10.92□□□□□ -0.66
UBE2D3-202ENST00000338145 PABPC5Q96DU9 382 aaKnown RBP10.92□□□□□ -0.66
UBE2D3-202ENST00000338145 BRPF3Q9ULD4 1205 aa10.92□□□□□ -0.66
UBE2D3-202ENST00000338145 PIK3R2O00459 728 aa10.91□□□□□ -0.66
UBE2D3-202ENST00000338145 PSAPP07602 524 aa10.91□□□□□ -0.66
UBE2D3-202ENST00000338145 TDO2P48775 406 aa10.91□□□□□ -0.66
UBE2D3-202ENST00000338145 DEFB103AP81534 67 aa10.91□□□□□ -0.66
UBE2D3-202ENST00000338145 ZP2Q05996 745 aa10.91□□□□□ -0.66
UBE2D3-202ENST00000338145 BAATQ14032 418 aaPredicted RBP10.91□□□□□ -0.66
UBE2D3-202ENST00000338145 GPNMBQ14956 572 aa10.91□□□□□ -0.66
UBE2D3-202ENST00000338145 HFE2Q6ZVN8 426 aa10.91□□□□□ -0.66
UBE2D3-202ENST00000338145 DNERQ8NFT8 737 aa10.91□□□□□ -0.66
UBE2D3-202ENST00000338145 POP1Q99575 1024 aaKnown RBP10.91□□□□□ -0.66
UBE2D3-202ENST00000338145 DNAJB12Q9NXW2 375 aaKnown RBP10.91□□□□□ -0.66
UBE2D3-202ENST00000338145 ABI2Q9NYB9 513 aaPredicted RBP10.91□□□□□ -0.66
UBE2D3-202ENST00000338145 SLC6A14Q9UN76 642 aa10.91□□□□□ -0.66
UBE2D3-202ENST00000338145 DDX49Q9Y6V7 483 aaKnown RBP10.91□□□□□ -0.66
UBE2D3-202ENST00000338145 WDFY4Q6ZS81 3184 aa10.91□□□□□ -0.66
UBE2D3-202ENST00000338145 PTPDC1A2A3K4 754 aa10.9□□□□□ -0.66
UBE2D3-202ENST00000338145 MMP20O60882 483 aa10.9□□□□□ -0.66
UBE2D3-202ENST00000338145 PRDM1O75626 825 aa10.9□□□□□ -0.66
UBE2D3-202ENST00000338145 CHGBP05060 677 aa10.9□□□□□ -0.66
UBE2D3-202ENST00000338145 APPP05067 770 aa10.9□□□□□ -0.66
UBE2D3-202ENST00000338145 TXNP10599 105 aaKnown RBP10.9□□□□□ -0.66
UBE2D3-202ENST00000338145 CKBP12277 381 aa10.9□□□□□ -0.66
UBE2D3-202ENST00000338145 TFAP4Q01664 338 aa10.9□□□□□ -0.66
UBE2D3-202ENST00000338145 KCTD1Q719H9 257 aa10.9□□□□□ -0.66
UBE2D3-202ENST00000338145 ZNF438Q7Z4V0 828 aa10.9□□□□□ -0.66
UBE2D3-202ENST00000338145 BMP8AQ7Z5Y6 402 aa10.9□□□□□ -0.66
UBE2D3-202ENST00000338145 TMCO2Q7Z6W1 182 aaPredicted RBP10.9□□□□□ -0.66
UBE2D3-202ENST00000338145 OR13H1Q8NG92 308 aa10.9□□□□□ -0.66
UBE2D3-202ENST00000338145 APPBP2Q92624 585 aa10.9□□□□□ -0.66
UBE2D3-202ENST00000338145 NACAP1Q9BZK3 213 aa10.9□□□□□ -0.66
UBE2D3-202ENST00000338145 RANBP17Q9H2T7 1088 aaKnown RBP10.9□□□□□ -0.66
UBE2D3-202ENST00000338145 RCAN3Q9UKA8 241 aa10.9□□□□□ -0.66
UBE2D3-202ENST00000338145 BRWD1Q9NSI6 2320 aa10.9□□□□□ -0.67
UBE2D3-202ENST00000338145 TET1Q8NFU7 2136 aa10.9□□□□□ -0.67
UBE2D3-202ENST00000338145 SIP14410 1827 aa10.89□□□□□ -0.67
UBE2D3-202ENST00000338145 H3BNC9 293 aa10.89□□□□□ -0.67
UBE2D3-202ENST00000338145 H3BQ06 376 aaPredicted RBP10.89□□□□□ -0.67
UBE2D3-202ENST00000338145 NBNO60934 754 aa10.89□□□□□ -0.67
UBE2D3-202ENST00000338145 AMHP03971 560 aa10.89□□□□□ -0.67
UBE2D3-202ENST00000338145 ZFYP08048 801 aaPredicted RBP10.89□□□□□ -0.67
UBE2D3-202ENST00000338145 RLBP1P12271 317 aa10.89□□□□□ -0.67
UBE2D3-202ENST00000338145 CASTP20810 708 aaKnown RBP10.89□□□□□ -0.67
UBE2D3-202ENST00000338145 AMPD1P23109 780 aa10.89□□□□□ -0.67
UBE2D3-202ENST00000338145 EDNRBP24530 442 aa10.89□□□□□ -0.67
UBE2D3-202ENST00000338145 HTRA4P83105 476 aaPredicted RBP10.89□□□□□ -0.67
UBE2D3-202ENST00000338145 COL19A1Q14993 1142 aa10.89□□□□□ -0.67
UBE2D3-202ENST00000338145 HERC4Q5GLZ8 1057 aaPredicted RBP10.89□□□□□ -0.67
UBE2D3-202ENST00000338145 TTC39BQ5VTQ0 682 aaPredicted RBP10.89□□□□□ -0.67
UBE2D3-202ENST00000338145 GDF6Q6KF10 455 aaPredicted RBP10.89□□□□□ -0.67
UBE2D3-202ENST00000338145 SCARF2Q96GP6 870 aaPredicted RBP10.89□□□□□ -0.67
UBE2D3-202ENST00000338145 KATNAL1Q9BW62 490 aa10.89□□□□□ -0.67
UBE2D3-202ENST00000338145 MAF1Q9H063 256 aa10.89□□□□□ -0.67
UBE2D3-202ENST00000338145 NSUN3Q9H649 340 aaKnown RBP10.89□□□□□ -0.67
UBE2D3-202ENST00000338145 FRRS1LQ9P0K9 344 aa10.89□□□□□ -0.67
UBE2D3-202ENST00000338145 STX8Q9UNK0 236 aa10.89□□□□□ -0.67
UBE2D3-202ENST00000338145 EMSYQ7Z589 1322 aa10.88□□□□□ -0.67
UBE2D3-202ENST00000338145 MYH7P12883 1935 aa10.88□□□□□ -0.67
UBE2D3-202ENST00000338145 RNF225M0QZC1 329 aaPredicted RBP10.88□□□□□ -0.67
UBE2D3-202ENST00000338145 GPAA1O43292 621 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms