RNA–Protein interactions for RNA: ENST00000336520.7

MRPL55-203, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-203ENST00000336520 TRANK1O15050 2925 aa12.74□□□□□ -0.37
MRPL55-203ENST00000336520 GPR182O15218 404 aa12.73□□□□□ -0.37
MRPL55-203ENST00000336520 P4HBP07237 508 aaKnown RBP12.73□□□□□ -0.37
MRPL55-203ENST00000336520 MCM7P33993 719 aa12.73□□□□□ -0.37
MRPL55-203ENST00000336520 DNM2P50570 870 aa12.73□□□□□ -0.37
MRPL55-203ENST00000336520 NLRP11P59045 1033 aaKnown RBP12.73□□□□□ -0.37
MRPL55-203ENST00000336520 ERVK-21P61565 698 aa12.73□□□□□ -0.37
MRPL55-203ENST00000336520 EPHA7Q15375 998 aa12.73□□□□□ -0.37
MRPL55-203ENST00000336520 TARBP2Q15633 366 aaKnown RBP12.73□□□□□ -0.37
MRPL55-203ENST00000336520 PLA2G4FQ68DD2 849 aa12.73□□□□□ -0.37
MRPL55-203ENST00000336520 ZNF710Q8N1W2 664 aa12.73□□□□□ -0.37
MRPL55-203ENST00000336520 FBXO18Q8NFZ0 1043 aa12.73□□□□□ -0.37
MRPL55-203ENST00000336520 SP7Q8TDD2 431 aaPredicted RBP12.73□□□□□ -0.37
MRPL55-203ENST00000336520 TMEM40Q8WWA1 233 aa12.73□□□□□ -0.37
MRPL55-203ENST00000336520 LINC01599Q8WXQ3 324 aa12.73□□□□□ -0.37
MRPL55-203ENST00000336520 TBC1D32Q96NH3 1257 aa12.73□□□□□ -0.37
MRPL55-203ENST00000336520 SH2D3AQ9BRG2 576 aa12.73□□□□□ -0.37
MRPL55-203ENST00000336520 TSPYL2Q9H2G4 693 aaPredicted RBP12.73□□□□□ -0.37
MRPL55-203ENST00000336520 ERVK-5Q9HDB9 667 aa12.73□□□□□ -0.37
MRPL55-203ENST00000336520 PCDHA12Q9UN75 941 aa12.73□□□□□ -0.37
MRPL55-203ENST00000336520 LOXHD1Q8IVV2 1947 aa12.72□□□□□ -0.37
MRPL55-203ENST00000336520 DENND3A2RUS2 1198 aa12.72□□□□□ -0.37
MRPL55-203ENST00000336520 WNT7AO00755 349 aa12.72□□□□□ -0.37
MRPL55-203ENST00000336520 GPR32O75388 356 aa12.72□□□□□ -0.37
MRPL55-203ENST00000336520 STBD1O95210 358 aa12.72□□□□□ -0.37
MRPL55-203ENST00000336520 TXKP42681 527 aa12.72□□□□□ -0.37
MRPL55-203ENST00000336520 CYP4A11Q02928 519 aa12.72□□□□□ -0.37
MRPL55-203ENST00000336520 GRB10Q13322 594 aa12.72□□□□□ -0.37
MRPL55-203ENST00000336520 ANO5Q75V66 913 aa12.72□□□□□ -0.37
MRPL55-203ENST00000336520 NPAS4Q8IUM7 802 aa12.72□□□□□ -0.37
MRPL55-203ENST00000336520 LINC01465Q8N7H1 131 aa12.72□□□□□ -0.37
MRPL55-203ENST00000336520 FBXO22Q8NEZ5 403 aa12.72□□□□□ -0.37
MRPL55-203ENST00000336520 GDPD5Q8WTR4 605 aa12.72□□□□□ -0.37
MRPL55-203ENST00000336520 NLRP7Q8WX94 980 aa12.72□□□□□ -0.37
MRPL55-203ENST00000336520 ZNF668Q96K58 619 aaPredicted RBP12.72□□□□□ -0.37
MRPL55-203ENST00000336520 JPH2Q9BR39 696 aaPredicted RBP12.72□□□□□ -0.37
MRPL55-203ENST00000336520 LXNQ9BS40 222 aa12.72□□□□□ -0.37
MRPL55-203ENST00000336520 C17orf80Q9BSJ5 609 aa12.72□□□□□ -0.37
MRPL55-203ENST00000336520 FOXP1Q9H334 677 aaPredicted RBP12.72□□□□□ -0.37
MRPL55-203ENST00000336520 TMX1Q9H3N1 280 aa12.72□□□□□ -0.37
MRPL55-203ENST00000336520 TTC12Q9H892 705 aaPredicted RBP12.72□□□□□ -0.37
MRPL55-203ENST00000336520 RGL1Q9NZL6 768 aa12.72□□□□□ -0.37
MRPL55-203ENST00000336520 LRFN2Q9ULH4 789 aa12.72□□□□□ -0.37
MRPL55-203ENST00000336520 ST3GAL5Q9UNP4 418 aa12.72□□□□□ -0.37
MRPL55-203ENST00000336520 ADGRA3Q8IWK6 1321 aa12.71□□□□□ -0.37
MRPL55-203ENST00000336520 STAG3L1P0CL83 205 aa12.71□□□□□ -0.37
MRPL55-203ENST00000336520 MCM2P49736 904 aa12.71□□□□□ -0.37
MRPL55-203ENST00000336520 SPIRE1Q08AE8 756 aa12.71□□□□□ -0.37
MRPL55-203ENST00000336520 BTG3Q14201 252 aaPredicted RBP12.71□□□□□ -0.37
MRPL55-203ENST00000336520 CTTNQ14247 550 aaKnown RBP12.71□□□□□ -0.37
MRPL55-203ENST00000336520 SKIV2LQ15477 1246 aaKnown RBP12.71□□□□□ -0.37
MRPL55-203ENST00000336520 FAM43BQ6ZT52 329 aaPredicted RBP12.71□□□□□ -0.37
MRPL55-203ENST00000336520 OTUD6AQ7L8S5 288 aa12.71□□□□□ -0.37
MRPL55-203ENST00000336520 RTN4RL1Q86UN2 441 aaPredicted RBP12.71□□□□□ -0.37
MRPL55-203ENST00000336520 FAM228AQ86W67 206 aa12.71□□□□□ -0.37
MRPL55-203ENST00000336520 NOSTRINQ8IVI9 506 aa12.71□□□□□ -0.37
MRPL55-203ENST00000336520 TPH2Q8IWU9 490 aa12.71□□□□□ -0.37
MRPL55-203ENST00000336520 FIBCD1Q8N539 461 aa12.71□□□□□ -0.37
MRPL55-203ENST00000336520 SLC7A3Q8WY07 619 aa12.71□□□□□ -0.37
MRPL55-203ENST00000336520 DYDC2Q96IM9 177 aa12.71□□□□□ -0.37
MRPL55-203ENST00000336520 TMX3Q96JJ7 454 aa12.71□□□□□ -0.37
MRPL55-203ENST00000336520 CEP170P1Q96L14 293 aa12.71□□□□□ -0.37
MRPL55-203ENST00000336520 SAMD11Q96NU1 681 aa12.71□□□□□ -0.37
MRPL55-203ENST00000336520 ADAM2Q99965 735 aa12.71□□□□□ -0.37
MRPL55-203ENST00000336520 ADAMTS10Q9H324 1103 aa12.71□□□□□ -0.37
MRPL55-203ENST00000336520 ZSWIM4Q9H7M6 989 aa12.71□□□□□ -0.37
MRPL55-203ENST00000336520 CYP26B1Q9NR63 512 aa12.71□□□□□ -0.37
MRPL55-203ENST00000336520 NOL7Q9UMY1 257 aaKnown RBP12.71□□□□□ -0.37
MRPL55-203ENST00000336520 MTCH2Q9Y6C9 303 aa12.71□□□□□ -0.37
MRPL55-203ENST00000336520 TTC3P53804 2025 aa12.71□□□□□ -0.38
MRPL55-203ENST00000336520 CDH23Q9H251 3354 aa12.7□□□□□ -0.38
MRPL55-203ENST00000336520 COL4A4P53420 1690 aaPredicted RBP12.7□□□□□ -0.38
MRPL55-203ENST00000336520 PRRC2BQ5JSZ5 2229 aaKnown RBP12.7□□□□□ -0.38
MRPL55-203ENST00000336520 MAFO75444 373 aaPredicted RBP12.7□□□□□ -0.38
MRPL55-203ENST00000336520 CD2BP2O95400 341 aaKnown RBP12.7□□□□□ -0.38
MRPL55-203ENST00000336520 EIF4BP23588 611 aaKnown RBP12.7□□□□□ -0.38
MRPL55-203ENST00000336520 YWHABP31946 246 aaKnown RBP12.7□□□□□ -0.38
MRPL55-203ENST00000336520 SARSP49591 514 aaKnown RBP12.7□□□□□ -0.38
MRPL55-203ENST00000336520 GPC3P51654 580 aa12.7□□□□□ -0.38
MRPL55-203ENST00000336520 POLGP54098 1239 aaPredicted RBP12.7□□□□□ -0.38
MRPL55-203ENST00000336520 NPEPPSP55786 919 aa12.7□□□□□ -0.38
MRPL55-203ENST00000336520 CDC42EP1Q00587 391 aa12.7□□□□□ -0.38
MRPL55-203ENST00000336520 DRP2Q13474 957 aa12.7□□□□□ -0.38
MRPL55-203ENST00000336520 EPC2Q52LR7 807 aa12.7□□□□□ -0.38
MRPL55-203ENST00000336520 XKR9Q5GH70 373 aa12.7□□□□□ -0.38
MRPL55-203ENST00000336520 TTC38Q5R3I4 469 aa12.7□□□□□ -0.38
MRPL55-203ENST00000336520 C4orf19Q8IY42 314 aa12.7□□□□□ -0.38
MRPL55-203ENST00000336520 NEK9Q8TD19 979 aa12.7□□□□□ -0.38
MRPL55-203ENST00000336520 CCDC43Q96MW1 224 aaKnown RBP12.7□□□□□ -0.38
MRPL55-203ENST00000336520 MTMR9Q96QG7 549 aa12.7□□□□□ -0.38
MRPL55-203ENST00000336520 EIF2AK1Q9BQI3 630 aaKnown RBP12.7□□□□□ -0.38
MRPL55-203ENST00000336520 C1orf112Q9NSG2 853 aa12.7□□□□□ -0.38
MRPL55-203ENST00000336520 RNF216Q9NWF9 866 aaPredicted RBP12.7□□□□□ -0.38
MRPL55-203ENST00000336520 SUCLA2Q9P2R7 463 aaPredicted RBP12.7□□□□□ -0.38
MRPL55-203ENST00000336520 WRAP73Q9P2S5 460 aaPredicted RBP12.7□□□□□ -0.38
MRPL55-203ENST00000336520 PPME1Q9Y570 386 aa12.7□□□□□ -0.38
MRPL55-203ENST00000336520 COL4A6Q14031 1691 aa12.7□□□□□ -0.38
MRPL55-203ENST00000336520 A0A0C4DFX4 3053 aa12.7□□□□□ -0.38
MRPL55-203ENST00000336520 CUL9Q8IWT3 2517 aa12.69□□□□□ -0.38
MRPL55-203ENST00000336520 IGKV6-21A0A0C4DH24 114 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms