RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 FAM186BQ8IYM0 893 aa13.8□□□□□ -0.2
LIMK1-201ENST00000336180 SAAL1Q96ER3 474 aa13.8□□□□□ -0.2
LIMK1-201ENST00000336180 VPS33BQ9H267 617 aa13.8□□□□□ -0.2
LIMK1-201ENST00000336180 TUFT1Q9NNX1 390 aa13.8□□□□□ -0.2
LIMK1-201ENST00000336180 GCNT4Q9P109 453 aa13.8□□□□□ -0.2
LIMK1-201ENST00000336180 CHORDC1Q9UHD1 332 aaPredicted RBP13.8□□□□□ -0.2
LIMK1-201ENST00000336180 ZNF214Q9UL59 606 aaPredicted RBP13.8□□□□□ -0.2
LIMK1-201ENST00000336180 PLAGL2Q9UPG8 496 aa13.8□□□□□ -0.2
LIMK1-201ENST00000336180 RGPD3A6NKT7 1758 aaPredicted RBP13.8□□□□□ -0.2
LIMK1-201ENST00000336180 RGPD4Q7Z3J3 1758 aa13.8□□□□□ -0.2
LIMK1-201ENST00000336180 EXOC3O60645 756 aa13.79□□□□□ -0.2
LIMK1-201ENST00000336180 USP2O75604 605 aaPredicted RBP13.79□□□□□ -0.2
LIMK1-201ENST00000336180 SEMA3FQ13275 785 aa13.79□□□□□ -0.2
LIMK1-201ENST00000336180 CBWD6Q4V339 395 aa13.79□□□□□ -0.2
LIMK1-201ENST00000336180 CBWD3Q5JTY5 395 aa13.79□□□□□ -0.2
LIMK1-201ENST00000336180 CBWD5Q5RIA9 395 aa13.79□□□□□ -0.2
LIMK1-201ENST00000336180 SFMBT2Q5VUG0 894 aa13.79□□□□□ -0.2
LIMK1-201ENST00000336180 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.79□□□□□ -0.2
LIMK1-201ENST00000336180 FIZ1Q96SL8 496 aa13.79□□□□□ -0.2
LIMK1-201ENST00000336180 SEPT11Q9NVA2 429 aaKnown RBP13.79□□□□□ -0.2
LIMK1-201ENST00000336180 TMOD4Q9NZQ9 345 aa13.79□□□□□ -0.2
LIMK1-201ENST00000336180 A0A087X0T9 212 aa13.79□□□□□ -0.2
LIMK1-201ENST00000336180 CALUO43852 315 aaPredicted RBP13.79□□□□□ -0.2
LIMK1-201ENST00000336180 RGS20O76081 388 aa13.79□□□□□ -0.2
LIMK1-201ENST00000336180 CALCAP01258 141 aa13.79□□□□□ -0.2
LIMK1-201ENST00000336180 FAM228BP0C875 321 aa13.79□□□□□ -0.2
LIMK1-201ENST00000336180 RARRES1P49788 294 aa13.79□□□□□ -0.2
LIMK1-201ENST00000336180 KIF5AQ12840 1032 aa13.79□□□□□ -0.2
LIMK1-201ENST00000336180 COBLL1Q53SF7 1204 aa13.79□□□□□ -0.2
LIMK1-201ENST00000336180 ZNF720Q7Z2F6 126 aa13.79□□□□□ -0.2
LIMK1-201ENST00000336180 PROCA1Q8NCQ7 364 aaPredicted RBP13.79□□□□□ -0.2
LIMK1-201ENST00000336180 CCDC127Q96BQ5 260 aa13.79□□□□□ -0.2
LIMK1-201ENST00000336180 MMS19Q96T76 1030 aa13.79□□□□□ -0.2
LIMK1-201ENST00000336180 POP1Q99575 1024 aaKnown RBP13.79□□□□□ -0.2
LIMK1-201ENST00000336180 PARD6BQ9BYG5 372 aa13.79□□□□□ -0.2
LIMK1-201ENST00000336180 HAUS4Q9H6D7 363 aa13.79□□□□□ -0.2
LIMK1-201ENST00000336180 ACP6Q9NPH0 428 aa13.79□□□□□ -0.2
LIMK1-201ENST00000336180 UBIAD1Q9Y5Z9 338 aa13.79□□□□□ -0.2
LIMK1-201ENST00000336180 PSME4Q14997 1843 aa13.79□□□□□ -0.2
LIMK1-201ENST00000336180 FER1L6Q2WGJ9 1857 aa13.79□□□□□ -0.2
LIMK1-201ENST00000336180 GFPT2O94808 682 aa13.79□□□□□ -0.2
LIMK1-201ENST00000336180 FTCDO95954 541 aa13.79□□□□□ -0.2
LIMK1-201ENST00000336180 AFPP02771 609 aaKnown RBP13.79□□□□□ -0.2
LIMK1-201ENST00000336180 PGK2P07205 417 aa13.79□□□□□ -0.2
LIMK1-201ENST00000336180 EPB41P11171 864 aaKnown RBP13.79□□□□□ -0.2
LIMK1-201ENST00000336180 YBX3P16989 372 aaKnown RBP eCLIP13.79□□□□□ -0.2
LIMK1-201ENST00000336180 KLHL30Q0D2K2 578 aa13.79□□□□□ -0.2
LIMK1-201ENST00000336180 EXOC3L4Q17RC7 722 aa13.79□□□□□ -0.2
LIMK1-201ENST00000336180 HGSNATQ68CP4 663 aa13.79□□□□□ -0.2
LIMK1-201ENST00000336180 NCAPG2Q86XI2 1143 aa13.79□□□□□ -0.2
LIMK1-201ENST00000336180 GSPT2Q8IYD1 628 aaKnown RBP13.79□□□□□ -0.2
LIMK1-201ENST00000336180 ZBTB10Q96DT7 871 aa13.79□□□□□ -0.2
LIMK1-201ENST00000336180 CCDC94Q9BW85 323 aaPredicted RBP13.79□□□□□ -0.2
LIMK1-201ENST00000336180 TYW1Q9NV66 732 aaKnown RBP13.79□□□□□ -0.2
LIMK1-201ENST00000336180 CDC23Q9UJX2 597 aa13.79□□□□□ -0.2
LIMK1-201ENST00000336180 CLSTN1O94985 981 aa13.78□□□□□ -0.2
LIMK1-201ENST00000336180 QARSP47897 775 aaKnown RBP13.78□□□□□ -0.2
LIMK1-201ENST00000336180 SETQ01105 290 aaPredicted RBP13.78□□□□□ -0.2
LIMK1-201ENST00000336180 SP2Q02086 613 aa13.78□□□□□ -0.2
LIMK1-201ENST00000336180 PCNX4Q63HM2 1172 aa13.78□□□□□ -0.2
LIMK1-201ENST00000336180 MCTP2Q6DN12 878 aa13.78□□□□□ -0.2
LIMK1-201ENST00000336180 NFRKBQ6P4R8 1299 aa13.78□□□□□ -0.2
LIMK1-201ENST00000336180 ANKRD35Q8N283 1001 aa13.78□□□□□ -0.2
LIMK1-201ENST00000336180 RBM46Q8TBY0 533 aaKnown RBP13.78□□□□□ -0.2
LIMK1-201ENST00000336180 CAGE1Q8TC20 777 aa13.78□□□□□ -0.2
LIMK1-201ENST00000336180 UPF1Q92900 1129 aaKnown RBP eCLIP13.78□□□□□ -0.29e-9■■■■■ 29.7
LIMK1-201ENST00000336180 PNKPQ96T60 521 aa13.78□□□□□ -0.2
LIMK1-201ENST00000336180 GTPBP4Q9BZE4 634 aaKnown RBP13.78□□□□□ -0.2
LIMK1-201ENST00000336180 AGPAT3Q9NRZ7 376 aa13.78□□□□□ -0.2
LIMK1-201ENST00000336180 MYO6Q9UM54 1294 aa13.78□□□□□ -0.2
LIMK1-201ENST00000336180 SPDYE16A6NNV3 312 aaPredicted RBP13.78□□□□□ -0.2
LIMK1-201ENST00000336180 IRF6O14896 467 aa13.78□□□□□ -0.2
LIMK1-201ENST00000336180 P4HBP07237 508 aaKnown RBP13.78□□□□□ -0.2
LIMK1-201ENST00000336180 PON1P27169 355 aa13.78□□□□□ -0.2
LIMK1-201ENST00000336180 USP8P40818 1118 aa13.78□□□□□ -0.2
LIMK1-201ENST00000336180 TMEM63BQ5T3F8 832 aa13.78□□□□□ -0.2
LIMK1-201ENST00000336180 LMBRD2Q68DH5 695 aaPredicted RBP13.78□□□□□ -0.2
LIMK1-201ENST00000336180 NLRX1Q86UT6 975 aa13.78□□□□□ -0.2
LIMK1-201ENST00000336180 SLC35C1Q96A29 364 aa13.78□□□□□ -0.2
LIMK1-201ENST00000336180 CEP63Q96MT8 703 aa13.78□□□□□ -0.2
LIMK1-201ENST00000336180 HYOU1Q9Y4L1 999 aa13.78□□□□□ -0.2
LIMK1-201ENST00000336180 KRT86O43790 486 aa13.77□□□□□ -0.2
LIMK1-201ENST00000336180 ZNF862O60290 1169 aa13.77□□□□□ -0.2
LIMK1-201ENST00000336180 LMNB1P20700 586 aa13.77□□□□□ -0.2
LIMK1-201ENST00000336180 DSG3P32926 999 aa13.77□□□□□ -0.2
LIMK1-201ENST00000336180 GCLMP48507 274 aa13.77□□□□□ -0.2
LIMK1-201ENST00000336180 KRT83P78385 493 aa13.77□□□□□ -0.2
LIMK1-201ENST00000336180 TRAF1Q13077 416 aa13.77□□□□□ -0.2
LIMK1-201ENST00000336180 COG1Q8WTW3 980 aa13.77□□□□□ -0.2
LIMK1-201ENST00000336180 PDE2AO00408 941 aaPredicted RBP13.77□□□□□ -0.21
LIMK1-201ENST00000336180 USP14P54578 494 aa13.77□□□□□ -0.21
LIMK1-201ENST00000336180 C2orf54Q08AI8 447 aa13.77□□□□□ -0.21
LIMK1-201ENST00000336180 MTERF2Q49AM1 385 aa13.77□□□□□ -0.21
LIMK1-201ENST00000336180 ANO5Q75V66 913 aa13.77□□□□□ -0.21
LIMK1-201ENST00000336180 BSNDQ8WZ55 320 aa13.77□□□□□ -0.21
LIMK1-201ENST00000336180 MS4A14Q96JA4 679 aa13.77□□□□□ -0.21
LIMK1-201ENST00000336180 AS3MTQ9HBK9 375 aa13.77□□□□□ -0.21
LIMK1-201ENST00000336180 TOPORSQ9NS56 1045 aaPredicted RBP13.77□□□□□ -0.21
LIMK1-201ENST00000336180 BTBD7Q9P203 1132 aa13.77□□□□□ -0.21
LIMK1-201ENST00000336180 SEPT9Q9UHD8 586 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms