RNA–Protein interactions for RNA: ENST00000335387.9

RC3H2-201, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 1 (best) BASIC

Gene RC3H2, Length 3,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-201ENST00000335387 TRIM66O15016 1216 aa14.6□□□□□ -0.07
RC3H2-201ENST00000335387 MARCH6O60337 910 aa14.6□□□□□ -0.07
RC3H2-201ENST00000335387 NDUFB10O96000 172 aa14.6□□□□□ -0.07
RC3H2-201ENST00000335387 TMEM253P0C7T8 217 aa14.6□□□□□ -0.07
RC3H2-201ENST00000335387 ERVK-9P63128 1117 aa14.6□□□□□ -0.07
RC3H2-201ENST00000335387 ITGB3BPQ13352 177 aaPredicted RBP14.6□□□□□ -0.07
RC3H2-201ENST00000335387 PRR16Q569H4 304 aa14.6□□□□□ -0.07
RC3H2-201ENST00000335387 ATP6V1G3Q96LB4 118 aa14.6□□□□□ -0.07
RC3H2-201ENST00000335387 GDAP1L1Q96MZ0 367 aa14.6□□□□□ -0.07
RC3H2-201ENST00000335387 A0A087WUV0 522 aaPredicted RBP14.6□□□□□ -0.07
RC3H2-201ENST00000335387 PGRMC1O00264 195 aaKnown RBP14.6□□□□□ -0.07
RC3H2-201ENST00000335387 ACTN1P12814 892 aa14.6□□□□□ -0.07
RC3H2-201ENST00000335387 GUCY2DQ02846 1103 aa14.6□□□□□ -0.07
RC3H2-201ENST00000335387 C12orf56Q8IXR9 622 aa14.6□□□□□ -0.07
RC3H2-201ENST00000335387 KRT12Q99456 494 aa14.6□□□□□ -0.07
RC3H2-201ENST00000335387 F8VZ95 297 aa14.6□□□□□ -0.07
RC3H2-201ENST00000335387 PAEPP09466 180 aa14.6□□□□□ -0.07
RC3H2-201ENST00000335387 EPS15P42566 896 aa14.6□□□□□ -0.07
RC3H2-201ENST00000335387 ICA1Q05084 483 aa14.6□□□□□ -0.07
RC3H2-201ENST00000335387 KIF22Q14807 665 aa14.6□□□□□ -0.07
RC3H2-201ENST00000335387 PPP2R5EQ16537 467 aa14.6□□□□□ -0.07
RC3H2-201ENST00000335387 AKT1S1Q96B36 256 aa14.6□□□□□ -0.07
RC3H2-201ENST00000335387 RABGAP1Q9Y3P9 1069 aa14.6□□□□□ -0.07
RC3H2-201ENST00000335387 SPDYE3A6NKU9 549 aa14.59□□□□□ -0.07
RC3H2-201ENST00000335387 MAPK13O15264 365 aa14.59□□□□□ -0.07
RC3H2-201ENST00000335387 SLITRK3O94933 977 aa14.59□□□□□ -0.07
RC3H2-201ENST00000335387 LMNB1P20700 586 aa14.59□□□□□ -0.07
RC3H2-201ENST00000335387 GUCY2CP25092 1073 aa14.59□□□□□ -0.07
RC3H2-201ENST00000335387 SOX5P35711 763 aa14.59□□□□□ -0.07
RC3H2-201ENST00000335387 PDE6BP35913 854 aa14.59□□□□□ -0.07
RC3H2-201ENST00000335387 PSMC2P35998 433 aaKnown RBP14.59□□□□□ -0.07
RC3H2-201ENST00000335387 CFAP58Q5T655 872 aa14.59□□□□□ -0.07
RC3H2-201ENST00000335387 LNX1Q8TBB1 728 aaPredicted RBP14.59□□□□□ -0.07
RC3H2-201ENST00000335387 MASTLQ96GX5 879 aa14.59□□□□□ -0.07
RC3H2-201ENST00000335387 CCDC43Q96MW1 224 aaKnown RBP14.59□□□□□ -0.07
RC3H2-201ENST00000335387 PARP14Q460N5 1801 aa14.59□□□□□ -0.07
RC3H2-201ENST00000335387 EML1O00423 815 aa14.59□□□□□ -0.07
RC3H2-201ENST00000335387 STAT1P42224 750 aa14.59□□□□□ -0.07
RC3H2-201ENST00000335387 CACNB1Q02641 598 aaPredicted RBP14.59□□□□□ -0.07
RC3H2-201ENST00000335387 PABPC4Q13310 644 aaKnown RBP eCLIP14.59□□□□□ -0.07
RC3H2-201ENST00000335387 VPS36Q86VN1 386 aa14.59□□□□□ -0.07
RC3H2-201ENST00000335387 METTL13Q8N6R0 699 aa14.59□□□□□ -0.07
RC3H2-201ENST00000335387 TAF4BQ92750 862 aa14.59□□□□□ -0.07
RC3H2-201ENST00000335387 RANBP17Q9H2T7 1088 aaKnown RBP14.59□□□□□ -0.07
RC3H2-201ENST00000335387 ZNFX1Q9P2E3 1918 aaKnown RBP14.59□□□□□ -0.07
RC3H2-201ENST00000335387 SMCHD1A6NHR9 2005 aa14.58□□□□□ -0.07
RC3H2-201ENST00000335387 MPHOSPH10O00566 681 aaKnown RBP14.58□□□□□ -0.07
RC3H2-201ENST00000335387 DDX3YO15523 660 aaKnown RBP14.58□□□□□ -0.07
RC3H2-201ENST00000335387 SSBP05455 408 aaKnown RBP eCLIP14.58□□□□□ -0.07
RC3H2-201ENST00000335387 KRT18P05783 430 aaKnown RBP14.58□□□□□ -0.07
RC3H2-201ENST00000335387 H2AFZP0C0S5 128 aa14.58□□□□□ -0.07
RC3H2-201ENST00000335387 BMP3P12645 472 aa14.58□□□□□ -0.07
RC3H2-201ENST00000335387 NOP2P46087 812 aaKnown RBP14.58□□□□□ -0.07
RC3H2-201ENST00000335387 AGBL2Q5U5Z8 902 aa14.58□□□□□ -0.07
RC3H2-201ENST00000335387 H2AFVQ71UI9 128 aa14.58□□□□□ -0.07
RC3H2-201ENST00000335387 NLGN1Q8N2Q7 840 aa14.58□□□□□ -0.07
RC3H2-201ENST00000335387 LMO3Q8TAP4 145 aa14.58□□□□□ -0.07
RC3H2-201ENST00000335387 PSMB7Q99436 277 aa14.58□□□□□ -0.07
RC3H2-201ENST00000335387 EPN3Q9H201 632 aa14.58□□□□□ -0.07
RC3H2-201ENST00000335387 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.58□□□□□ -0.07
RC3H2-201ENST00000335387 GCNT4Q9P109 453 aa14.58□□□□□ -0.07
RC3H2-201ENST00000335387 DCAF8L1A6NGE4 600 aa14.58□□□□□ -0.08
RC3H2-201ENST00000335387 RIMBP2O15034 1052 aa14.58□□□□□ -0.08
RC3H2-201ENST00000335387 P4HA2O15460 535 aa14.58□□□□□ -0.08
RC3H2-201ENST00000335387 SCNN1DP51172 638 aa14.58□□□□□ -0.08
RC3H2-201ENST00000335387 GNGT1P63211 74 aa14.58□□□□□ -0.08
RC3H2-201ENST00000335387 BIRC3Q13489 604 aa14.58□□□□□ -0.08
RC3H2-201ENST00000335387 UAP1Q16222 522 aaPredicted RBP14.58□□□□□ -0.08
RC3H2-201ENST00000335387 ZNF720Q7Z2F6 126 aa14.58□□□□□ -0.08
RC3H2-201ENST00000335387 NEK9Q8TD19 979 aa14.58□□□□□ -0.08
RC3H2-201ENST00000335387 WDR18Q9BV38 432 aa14.58□□□□□ -0.08
RC3H2-201ENST00000335387 RSPH14Q9UHP6 348 aa14.58□□□□□ -0.08
RC3H2-201ENST00000335387 NOC2LQ9Y3T9 749 aaKnown RBP14.58□□□□□ -0.08
RC3H2-201ENST00000335387 ZSCAN5CA6NGD5 496 aaPredicted RBP14.57□□□□□ -0.08
RC3H2-201ENST00000335387 MTA2O94776 668 aa14.57□□□□□ -0.08
RC3H2-201ENST00000335387 VIL1P09327 827 aaKnown RBP14.57□□□□□ -0.08
RC3H2-201ENST00000335387 MATR3P43243 847 aaKnown RBP eCLIP14.57□□□□□ -0.083e-9■□□□□ 10.7
RC3H2-201ENST00000335387 CASP4P49662 377 aa14.57□□□□□ -0.08
RC3H2-201ENST00000335387 DRG2P55039 364 aaKnown RBP14.57□□□□□ -0.08
RC3H2-201ENST00000335387 MTMR3Q13615 1198 aa14.57□□□□□ -0.08
RC3H2-201ENST00000335387 ABCB5Q2M3G0 1257 aa14.57□□□□□ -0.08
RC3H2-201ENST00000335387 RFFLQ8WZ73 363 aa14.57□□□□□ -0.08
RC3H2-201ENST00000335387 LRRC45Q96CN5 670 aa14.57□□□□□ -0.08
RC3H2-201ENST00000335387 SPAG5Q96R06 1193 aa14.57□□□□□ -0.08
RC3H2-201ENST00000335387 RUFY1Q96T51 708 aa14.57□□□□□ -0.08
RC3H2-201ENST00000335387 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.57□□□□□ -0.082e-16■□□□□ 9.3
RC3H2-201ENST00000335387 WDR81Q562E7 1941 aa14.57□□□□□ -0.08
RC3H2-201ENST00000335387 ARID2Q68CP9 1835 aa14.57□□□□□ -0.08
RC3H2-201ENST00000335387 RSPH10B2B2RC85 870 aa14.57□□□□□ -0.08
RC3H2-201ENST00000335387 RSPH10BP0C881 870 aa14.57□□□□□ -0.08
RC3H2-201ENST00000335387 FMO5P49326 533 aa14.57□□□□□ -0.08
RC3H2-201ENST00000335387 SNRPFP62306 86 aaKnown RBP14.57□□□□□ -0.08
RC3H2-201ENST00000335387 STYK1Q6J9G0 422 aa14.57□□□□□ -0.08
RC3H2-201ENST00000335387 CARD9Q9H257 536 aa14.57□□□□□ -0.08
RC3H2-201ENST00000335387 BHMT2Q9H2M3 363 aa14.57□□□□□ -0.08
RC3H2-201ENST00000335387 RPTORQ8N122 1335 aa14.57□□□□□ -0.08
RC3H2-201ENST00000335387 SHTN1A0MZ66 631 aa14.57□□□□□ -0.08
RC3H2-201ENST00000335387 KCNK3O14649 394 aa14.57□□□□□ -0.08
RC3H2-201ENST00000335387 TBCAO75347 108 aaKnown RBP14.57□□□□□ -0.08
RC3H2-201ENST00000335387 SETQ01105 290 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms