RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 FAM25AB3EWG3 89 aa5.89□□□□□ -1.47
PTPRB-202ENST00000334414 FAM25CB3EWG5 89 aa5.89□□□□□ -1.47
PTPRB-202ENST00000334414 FAM25GB3EWG6 89 aa5.89□□□□□ -1.47
PTPRB-202ENST00000334414 NOP56O00567 594 aaKnown RBP5.89□□□□□ -1.47
PTPRB-202ENST00000334414 KPNA4O00629 521 aaPredicted RBP5.89□□□□□ -1.47
PTPRB-202ENST00000334414 TMEM259Q4ZIN3 620 aa5.89□□□□□ -1.47
PTPRB-202ENST00000334414 OLFML2BQ68BL8 750 aa5.89□□□□□ -1.47
PTPRB-202ENST00000334414 ZNF654Q8IZM8 581 aa5.89□□□□□ -1.47
PTPRB-202ENST00000334414 FAM161BQ96MY7 647 aa5.89□□□□□ -1.47
PTPRB-202ENST00000334414 CARD9Q9H257 536 aa5.89□□□□□ -1.47
PTPRB-202ENST00000334414 ERBB4Q15303 1308 aa5.89□□□□□ -1.47
PTPRB-202ENST00000334414 MAGOHP61326 146 aaKnown RBP5.89□□□□□ -1.47
PTPRB-202ENST00000334414 PDCLQ13371 301 aa5.89□□□□□ -1.47
PTPRB-202ENST00000334414 PLS1Q14651 629 aa5.89□□□□□ -1.47
PTPRB-202ENST00000334414 TPTE2Q6XPS3 522 aa5.89□□□□□ -1.47
PTPRB-202ENST00000334414 WAPLQ7Z5K2 1190 aa5.89□□□□□ -1.47
PTPRB-202ENST00000334414 C8orf58Q8NAV2 365 aa5.89□□□□□ -1.47
PTPRB-202ENST00000334414 DEPTORQ8TB45 409 aa5.89□□□□□ -1.47
PTPRB-202ENST00000334414 FAR2Q96K12 515 aa5.89□□□□□ -1.47
PTPRB-202ENST00000334414 ASCC2Q9H1I8 757 aaPredicted RBP5.89□□□□□ -1.47
PTPRB-202ENST00000334414 ATAD3AQ9NVI7 634 aa5.89□□□□□ -1.47
PTPRB-202ENST00000334414 PPARGC1AQ9UBK2 798 aaKnown RBP5.89□□□□□ -1.47
PTPRB-202ENST00000334414 SRPRBQ9Y5M8 271 aaKnown RBP5.89□□□□□ -1.47
PTPRB-202ENST00000334414 KDM7AQ6ZMT4 941 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 SKAP1Q86WV1 359 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 JDP2Q8WYK2 163 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 XAGE2Q96GT9 111 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 CDCA7Q9BWT1 371 aaPredicted RBP5.88□□□□□ -1.47
PTPRB-202ENST00000334414 VCPKMTQ9H867 229 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 CCDC87Q9NVE4 849 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 NRBP1Q9UHY1 535 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 A2MP01023 1474 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 ANGPT2O15123 496 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 STX7O15400 261 aaKnown RBP5.88□□□□□ -1.47
PTPRB-202ENST00000334414 BNC1Q01954 994 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 EFHBQ8N7U6 833 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 QKIQ96PU8 341 aaKnown RBP eCLIP5.88□□□□□ -1.47
PTPRB-202ENST00000334414 ENOPH1Q9UHY7 261 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 H7C0C1 242 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 RFC4P35249 363 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 ATP5OP48047 213 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 PPP4R4Q6NUP7 873 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 POP5Q969H6 163 aaKnown RBP5.88□□□□□ -1.47
PTPRB-202ENST00000334414 ATP6V1E2Q96A05 226 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 TRPC7Q9HCX4 862 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 ZHX2Q9Y6X8 837 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 ACEP12821 1306 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 KRT87PA6NCN2 255 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 WBP4O75554 376 aaKnown RBP5.88□□□□□ -1.47
PTPRB-202ENST00000334414 TTKP33981 857 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 ADCK5Q3MIX3 580 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 TRIM72Q6ZMU5 477 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 TTC8Q8TAM2 541 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 FAM227BQ96M60 508 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 CYTH2Q99418 400 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 APOL4Q9BPW4 351 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 KIAA1586Q9HCI6 787 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 PSMC3IPQ9P2W1 217 aaPredicted RBP5.88□□□□□ -1.47
PTPRB-202ENST00000334414 RWDD3Q9Y3V2 267 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 ZNF263O14978 683 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 PTCD1O75127 700 aaKnown RBP5.88□□□□□ -1.47
PTPRB-202ENST00000334414 CIAO1O76071 339 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 SLC1A4P43007 532 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 EPS8Q12929 822 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 CEP78Q5JTW2 689 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 ADPGKQ9BRR6 497 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 FRMD8P1Q9BZ68 369 aaPredicted RBP5.88□□□□□ -1.47
PTPRB-202ENST00000334414 NDEL1Q9GZM8 345 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 SMYD2Q9NRG4 433 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 DNAJC12Q9UKB3 198 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 ENO4A6NNW6 628 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 PRPSAP2O60256 369 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 KLHL41O60662 606 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 SEC24BO95487 1268 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 RXRGP48443 463 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 GPR141Q7Z602 305 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 NDST4Q9H3R1 872 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 APPL1Q9UKG1 709 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 CEP170Q5SW79 1584 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 ADGRF5Q8IZF2 1346 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 ABLIM1O14639 778 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 ENC1O14682 589 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 CCNE1P24864 410 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 C4orf22Q6V702 233 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 PPM1KQ8N3J5 372 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 HIC2Q96JB3 615 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 RANBP17Q9H2T7 1088 aaKnown RBP5.88□□□□□ -1.47
PTPRB-202ENST00000334414 PICK1Q9NRD5 415 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 SLC12A6Q9UHW9 1150 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 NCAPD2Q15021 1401 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 ATP5J2-PTCD1G3V325 749 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 H0Y3Z8 333 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 PDE5AO76074 875 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 LDHAP00338 332 aaKnown RBP5.88□□□□□ -1.47
PTPRB-202ENST00000334414 SCP2P22307 547 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 NDUFAF2Q8N183 169 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 CNBD1Q8NA66 436 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 SH3TC2Q8TF17 1288 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 SMCO2A6NFE2 343 aa5.88□□□□□ -1.47
PTPRB-202ENST00000334414 M0R3G1 203 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms