RNA–Protein interactions for RNA: ENST00000334256.8

KPNA4-201, Transcript of karyopherin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA4, Length 8,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-201ENST00000334256 NDEL1Q9GZM8 345 aa13.54□□□□□ -0.24
KPNA4-201ENST00000334256 ING2Q9H160 280 aa13.54□□□□□ -0.24
KPNA4-201ENST00000334256 GLT8D2Q9H1C3 349 aa13.54□□□□□ -0.24
KPNA4-201ENST00000334256 FCER1AP12319 257 aa13.54□□□□□ -0.24
KPNA4-201ENST00000334256 ZNF24P17028 368 aa13.54□□□□□ -0.24
KPNA4-201ENST00000334256 STAT1P42224 750 aa13.54□□□□□ -0.24
KPNA4-201ENST00000334256 SH3BGRP55822 239 aaPredicted RBP13.54□□□□□ -0.24
KPNA4-201ENST00000334256 ALDH6A1Q02252 535 aaKnown RBP13.54□□□□□ -0.24
KPNA4-201ENST00000334256 MESDQ14696 234 aa13.54□□□□□ -0.24
KPNA4-201ENST00000334256 ICA1LQ8NDH6 482 aa13.54□□□□□ -0.24
KPNA4-201ENST00000334256 XAGE2Q96GT9 111 aa13.54□□□□□ -0.24
KPNA4-201ENST00000334256 PPP1R13BQ96KQ4 1090 aa13.54□□□□□ -0.24
KPNA4-201ENST00000334256 PCDHGB4Q9UN71 923 aa13.54□□□□□ -0.24
KPNA4-201ENST00000334256 KCNJ14Q9UNX9 436 aa13.54□□□□□ -0.24
KPNA4-201ENST00000334256 HUS1O60921 280 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 XRCC5P13010 732 aaKnown RBP13.53□□□□□ -0.24
KPNA4-201ENST00000334256 ABL2P42684 1182 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 PLIN5Q00G26 463 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 MTX1Q13505 466 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 KLHL29Q96CT2 875 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 CAND2O75155 1236 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 GSNP06396 782 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 RARBP10826 455 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 KRT20P35900 424 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 TRAF7Q6Q0C0 670 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 RHPN1Q8TCX5 695 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 DYRK3O43781 588 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 RC3H1Q5TC82 1133 aaKnown RBP13.53□□□□□ -0.24
KPNA4-201ENST00000334256 TBC1D1Q86TI0 1168 aaPredicted RBP13.53□□□□□ -0.24
KPNA4-201ENST00000334256 P3H4Q92791 437 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 CCDC3Q9BQI4 270 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 BHMT2Q9H2M3 363 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 CCDC195A0A1B0GUA6 201 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 USP17L3A6NCW0 530 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 USP17L4A6NCW7 530 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 PQBP1O60828 265 aaKnown RBP13.53□□□□□ -0.24
KPNA4-201ENST00000334256 CYP4F22Q6NT55 531 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 BTNL9Q6UXG8 535 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 USP17L1Q7RTZ2 530 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 SEPT12Q8IYM1 358 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 SSH1Q8WYL5 1049 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 LZTS3O60299 673 aaPredicted RBP13.53□□□□□ -0.24
KPNA4-201ENST00000334256 MSH2P43246 934 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 NRBF2Q96F24 287 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 PARVBQ9HBI1 364 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 MSRAQ9UJ68 235 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 ANKRD12Q6UB98 2062 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 PRR23BQ6ZRT6 265 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 CLIP3Q96DZ5 547 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 ZBTB18Q99592 522 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 TRIM54Q9BYV2 358 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 GRIN1Q05586 938 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 LUZP2Q86TE4 346 aa13.53□□□□□ -0.24
KPNA4-201ENST00000334256 MARCH10Q8NA82 808 aaPredicted RBP13.53□□□□□ -0.24
KPNA4-201ENST00000334256 HIRAP54198 1017 aaPredicted RBP13.52□□□□□ -0.24
KPNA4-201ENST00000334256 PTH1RQ03431 593 aa13.52□□□□□ -0.24
KPNA4-201ENST00000334256 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.52□□□□□ -0.24
KPNA4-201ENST00000334256 MYCBPQ99417 103 aaPredicted RBP13.52□□□□□ -0.24
KPNA4-201ENST00000334256 GOLGA8IPA6NC78 632 aa13.52□□□□□ -0.24
KPNA4-201ENST00000334256 GOLGA8JA6NMD2 632 aa13.52□□□□□ -0.24
KPNA4-201ENST00000334256 RALAP11233 206 aa13.52□□□□□ -0.24
KPNA4-201ENST00000334256 GTF2E2P29084 291 aaKnown RBP13.52□□□□□ -0.24
KPNA4-201ENST00000334256 NPY2RP49146 381 aa13.52□□□□□ -0.24
KPNA4-201ENST00000334256 CACNB1Q02641 598 aaPredicted RBP13.52□□□□□ -0.24
KPNA4-201ENST00000334256 TWF1Q12792 350 aa13.52□□□□□ -0.24
KPNA4-201ENST00000334256 PRAMEF18Q5VWM3 479 aa13.52□□□□□ -0.24
KPNA4-201ENST00000334256 SKA1Q96BD8 255 aa13.52□□□□□ -0.24
KPNA4-201ENST00000334256 ABI2Q9NYB9 513 aaPredicted RBP13.52□□□□□ -0.24
KPNA4-201ENST00000334256 KLHL8Q9P2G9 620 aaPredicted RBP13.52□□□□□ -0.24
KPNA4-201ENST00000334256 FGFR1P11362 822 aa13.52□□□□□ -0.25
KPNA4-201ENST00000334256 ALDH7A1P49419 539 aaKnown RBP13.52□□□□□ -0.25
KPNA4-201ENST00000334256 AP2B1P63010 937 aa13.52□□□□□ -0.25
KPNA4-201ENST00000334256 PTK2Q05397 1052 aa13.52□□□□□ -0.25
KPNA4-201ENST00000334256 CUL3Q13618 768 aa13.52□□□□□ -0.25
KPNA4-201ENST00000334256 ZSCAN26Q16670 478 aa13.52□□□□□ -0.25
KPNA4-201ENST00000334256 FBXO41Q8TF61 875 aa13.52□□□□□ -0.25
KPNA4-201ENST00000334256 USP17L12C9JPN9 530 aa13.52□□□□□ -0.25
KPNA4-201ENST00000334256 USP17L21D6R901 530 aa13.52□□□□□ -0.25
KPNA4-201ENST00000334256 PRPSAP2O60256 369 aa13.52□□□□□ -0.25
KPNA4-201ENST00000334256 TCP11X2Q5H9J9 407 aa13.52□□□□□ -0.25
KPNA4-201ENST00000334256 ZC3H18Q86VM9 953 aaKnown RBP13.52□□□□□ -0.25
KPNA4-201ENST00000334256 VPS37AQ8NEZ2 397 aa13.52□□□□□ -0.25
KPNA4-201ENST00000334256 INPP5DQ92835 1189 aa13.52□□□□□ -0.25
KPNA4-201ENST00000334256 PMM1Q92871 262 aa13.52□□□□□ -0.25
KPNA4-201ENST00000334256 NUP58Q9BVL2 599 aa13.52□□□□□ -0.25
KPNA4-201ENST00000334256 FHDC1Q9C0D6 1143 aaPredicted RBP13.52□□□□□ -0.25
KPNA4-201ENST00000334256 SRPRBQ9Y5M8 271 aaKnown RBP13.52□□□□□ -0.25
KPNA4-201ENST00000334256 WDR47O94967 919 aa13.52□□□□□ -0.25
KPNA4-201ENST00000334256 TTC38Q5R3I4 469 aa13.52□□□□□ -0.25
KPNA4-201ENST00000334256 AGR3Q8TD06 166 aa13.52□□□□□ -0.25
KPNA4-201ENST00000334256 RUBCNLQ9H714 662 aa13.52□□□□□ -0.25
KPNA4-201ENST00000334256 ATP6V1HQ9UI12 483 aa13.52□□□□□ -0.25
KPNA4-201ENST00000334256 KSR2Q6VAB6 950 aa13.52□□□□□ -0.25
KPNA4-201ENST00000334256 CYP4X1Q8N118 509 aa13.52□□□□□ -0.25
KPNA4-201ENST00000334256 THEGQ9P2T0 379 aa13.52□□□□□ -0.25
KPNA4-201ENST00000334256 SYNRGQ9UMZ2 1314 aa13.52□□□□□ -0.25
KPNA4-201ENST00000334256 YWHAZP63104 245 aaKnown RBP13.51□□□□□ -0.25
KPNA4-201ENST00000334256 OCA2Q04671 838 aa13.51□□□□□ -0.25
KPNA4-201ENST00000334256 SREBF2Q12772 1141 aa13.51□□□□□ -0.25
KPNA4-201ENST00000334256 ATG16L1Q676U5 607 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms