RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 BICDL2A1A5D9 508 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 CAMTA2O94983 1202 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 GH1P01241 217 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 MSH2P43246 934 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 TNNI2P48788 182 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 VPS41P49754 854 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 CASP5P51878 434 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 ICA1Q05084 483 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 LAMB3Q13751 1172 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 HP1BP3Q5SSJ5 553 aaPredicted RBP12.05□□□□□ -0.48
CCDC87-201ENST00000333861 ANO7Q6IWH7 933 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 LRIG3Q6UXM1 1119 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 SV2BQ7L1I2 683 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 MIGA2Q7L4E1 593 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 MAPKAPK5Q8IW41 473 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 CNBD1Q8NA66 436 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 PHC3Q8NDX5 983 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 SNX29Q8TEQ0 813 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 TEKT4Q8WW24 435 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 RUBCNQ92622 972 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 RPS6KC1Q96S38 1066 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 PPP1R12CQ9BZL4 782 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 SEMA4AQ9H3S1 761 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 C2CD2Q9Y426 696 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 TCP11X1B4DZS4 312 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 PIAS1O75925 651 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 RFC5P40937 340 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 SNAP25P60880 206 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 KCNA1Q09470 495 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 SLC29A2Q14542 456 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 NAB2Q15742 525 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 CRELD2Q6UXH1 353 aaPredicted RBP12.05□□□□□ -0.48
CCDC87-201ENST00000333861 ANKS1AQ92625 1134 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 EPAS1Q99814 870 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 IGSF9BQ9UPX0 1349 aa12.05□□□□□ -0.48
CCDC87-201ENST00000333861 ANKRD63C9JTQ0 380 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 GFPT2O94808 682 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 BMP15O95972 392 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 MARCKSL1P49006 195 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 LONRF1Q17RB8 773 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 LRRC55Q6ZSA7 311 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 PEX26Q7Z412 305 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 RNF25Q96BH1 459 aaPredicted RBP12.04□□□□□ -0.48
CCDC87-201ENST00000333861 DDX23Q9BUQ8 820 aaKnown RBP12.04□□□□□ -0.48
CCDC87-201ENST00000333861 KCNK9Q9NPC2 374 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 SUGT1Q9Y2Z0 365 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 APBA3O96018 575 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 PLCG2P16885 1265 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 ASIC2Q16515 512 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 NUGGCQ68CJ6 796 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 PIGWQ7Z7B1 504 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 ZSCAN29Q8IWY8 852 aaPredicted RBP12.04□□□□□ -0.48
CCDC87-201ENST00000333861 FITM2Q8N6M3 262 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 RDH13Q8NBN7 331 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 UCMAQ8WVF2 138 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 C18orf8Q96DM3 657 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 RMDN2Q96LZ7 410 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 SWAP70Q9UH65 585 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 MAD2L2Q9UI95 211 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 A6NHS1 94 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 STXBP3O00186 592 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 PJA2O43164 708 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 ATMINO43313 823 aaPredicted RBP12.04□□□□□ -0.48
CCDC87-201ENST00000333861 CALCAP01258 141 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 PAEPP09466 180 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 SSR1P43307 286 aaKnown RBP12.04□□□□□ -0.48
CCDC87-201ENST00000333861 CDK17Q00537 523 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 MTM1Q13496 603 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 PLS1Q14651 629 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 ZNF746Q6NUN9 644 aaPredicted RBP12.04□□□□□ -0.48
CCDC87-201ENST00000333861 CAPN12Q6ZSI9 719 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 PALB2Q86YC2 1186 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 B4GALNT2Q8NHY0 566 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 RBM46Q8TBY0 533 aaKnown RBP12.04□□□□□ -0.48
CCDC87-201ENST00000333861 FBXO25Q8TCJ0 367 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 BTBD6Q96KE9 485 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 GPCPD1Q9NPB8 672 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 ACP6Q9NPH0 428 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 TAS2R14Q9NYV8 317 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 DLGAP2Q9P1A6 1054 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 PPP1R9AQ9ULJ8 1098 aa12.04□□□□□ -0.48
CCDC87-201ENST00000333861 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.04□□□□□ -0.48
CCDC87-201ENST00000333861 MYH4Q9Y623 1939 aa12.03□□□□□ -0.48
CCDC87-201ENST00000333861 BTAF1O14981 1849 aa12.03□□□□□ -0.48
CCDC87-201ENST00000333861 COL1A1P02452 1464 aaPredicted RBP12.03□□□□□ -0.48
CCDC87-201ENST00000333861 TCRBV7S2A1N4TA0A589 114 aa12.03□□□□□ -0.48
CCDC87-201ENST00000333861 ERVV-1B6SEH8 477 aa12.03□□□□□ -0.48
CCDC87-201ENST00000333861 KLRF2D3W0D1 207 aa12.03□□□□□ -0.48
CCDC87-201ENST00000333861 RGS16O15492 202 aaPredicted RBP12.03□□□□□ -0.48
CCDC87-201ENST00000333861 ACSL3O95573 720 aa12.03□□□□□ -0.48
CCDC87-201ENST00000333861 MYBP10242 640 aa12.03□□□□□ -0.48
CCDC87-201ENST00000333861 CCND1P24385 295 aa12.03□□□□□ -0.48
CCDC87-201ENST00000333861 KIF5BP33176 963 aa12.03□□□□□ -0.48
CCDC87-201ENST00000333861 SLC16A2P36021 539 aa12.03□□□□□ -0.48
CCDC87-201ENST00000333861 CASP4P49662 377 aa12.03□□□□□ -0.48
CCDC87-201ENST00000333861 SCNN1BP51168 640 aa12.03□□□□□ -0.48
CCDC87-201ENST00000333861 RAD23BP54727 409 aa12.03□□□□□ -0.48
CCDC87-201ENST00000333861 AGBL2Q5U5Z8 902 aa12.03□□□□□ -0.48
CCDC87-201ENST00000333861 CWF19L1Q69YN2 538 aaKnown RBP12.03□□□□□ -0.48
CCDC87-201ENST00000333861 CENPPQ6IPU0 288 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms