RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 ATP8A2Q9NTI2 1148 aa12.84□□□□□ -0.35
LIMK2-202ENST00000333611 MAD2L2Q9UI95 211 aa12.84□□□□□ -0.35
LIMK2-202ENST00000333611 HNRNPRO43390 633 aaKnown RBP12.83□□□□□ -0.35
LIMK2-202ENST00000333611 DNAJC8O75937 253 aaPredicted RBP12.83□□□□□ -0.35
LIMK2-202ENST00000333611 EPB41P11171 864 aaKnown RBP12.83□□□□□ -0.35
LIMK2-202ENST00000333611 KCNA3P22001 575 aa12.83□□□□□ -0.35
LIMK2-202ENST00000333611 KLRC1P26715 233 aa12.83□□□□□ -0.35
LIMK2-202ENST00000333611 SLC35G1Q2M3R5 365 aa12.83□□□□□ -0.35
LIMK2-202ENST00000333611 INTS8Q75QN2 995 aaKnown RBP12.83□□□□□ -0.35
LIMK2-202ENST00000333611 PTF1AQ7RTS3 328 aa12.83□□□□□ -0.35
LIMK2-202ENST00000333611 CCDC84Q86UT8 332 aaPredicted RBP12.83□□□□□ -0.35
LIMK2-202ENST00000333611 IQCKQ8N0W5 287 aa12.83□□□□□ -0.35
LIMK2-202ENST00000333611 GALNT15Q8N3T1 639 aa12.83□□□□□ -0.35
LIMK2-202ENST00000333611 MMGT1Q8N4V1 131 aa12.83□□□□□ -0.35
LIMK2-202ENST00000333611 UCMAQ8WVF2 138 aa12.83□□□□□ -0.35
LIMK2-202ENST00000333611 DDX12PQ92771 950 aa12.83□□□□□ -0.35
LIMK2-202ENST00000333611 OCEL1Q9H607 264 aa12.83□□□□□ -0.35
LIMK2-202ENST00000333611 PCMTD2Q9NV79 361 aa12.83□□□□□ -0.35
LIMK2-202ENST00000333611 FGFR1OP2Q9NVK5 253 aa12.83□□□□□ -0.35
LIMK2-202ENST00000333611 BARHL2Q9NY43 387 aa12.83□□□□□ -0.35
LIMK2-202ENST00000333611 SLC4A7Q9Y6M7 1214 aa12.83□□□□□ -0.35
LIMK2-202ENST00000333611 NID2Q14112 1375 aa12.83□□□□□ -0.36
LIMK2-202ENST00000333611 PKD1L3Q7Z443 1732 aa12.83□□□□□ -0.36
LIMK2-202ENST00000333611 TRPM3Q9HCF6 1732 aaPredicted RBP12.83□□□□□ -0.36
LIMK2-202ENST00000333611 RGS16O15492 202 aaPredicted RBP12.83□□□□□ -0.36
LIMK2-202ENST00000333611 ORC4O43929 436 aa12.83□□□□□ -0.36
LIMK2-202ENST00000333611 FUT4P22083 530 aa12.83□□□□□ -0.36
LIMK2-202ENST00000333611 GCLCP48506 637 aaPredicted RBP12.83□□□□□ -0.36
LIMK2-202ENST00000333611 MKRN4PQ13434 485 aaPredicted RBP12.83□□□□□ -0.36
LIMK2-202ENST00000333611 ADAM9Q13443 819 aa12.83□□□□□ -0.36
LIMK2-202ENST00000333611 KRT25Q7Z3Z0 450 aa12.83□□□□□ -0.36
LIMK2-202ENST00000333611 CCNJLQ8IV13 435 aa12.83□□□□□ -0.36
LIMK2-202ENST00000333611 SPIRE2Q8WWL2 714 aa12.83□□□□□ -0.36
LIMK2-202ENST00000333611 EYA3Q99504 573 aa12.83□□□□□ -0.36
LIMK2-202ENST00000333611 TMBIM4Q9HC24 238 aa12.83□□□□□ -0.36
LIMK2-202ENST00000333611 BLOC1S6Q9UL45 172 aa12.83□□□□□ -0.36
LIMK2-202ENST00000333611 SRCAPQ6ZRS2 3230 aa12.83□□□□□ -0.36
LIMK2-202ENST00000333611 LAMB4A4D0S4 1761 aa12.83□□□□□ -0.36
LIMK2-202ENST00000333611 NUP188Q5SRE5 1749 aa12.83□□□□□ -0.36
LIMK2-202ENST00000333611 DAPK3O43293 454 aa12.83□□□□□ -0.36
LIMK2-202ENST00000333611 KCNQ2O43526 872 aa12.83□□□□□ -0.36
LIMK2-202ENST00000333611 GNA11P29992 359 aa12.83□□□□□ -0.36
LIMK2-202ENST00000333611 HERC4Q5GLZ8 1057 aaPredicted RBP12.83□□□□□ -0.36
LIMK2-202ENST00000333611 NDNQ99608 321 aa12.83□□□□□ -0.36
LIMK2-202ENST00000333611 SRP68Q9UHB9 627 aaKnown RBP12.83□□□□□ -0.36
LIMK2-202ENST00000333611 TNS2Q63HR2 1409 aa12.83□□□□□ -0.36
LIMK2-202ENST00000333611 FAM200BP0CF97 657 aa12.82□□□□□ -0.36
LIMK2-202ENST00000333611 MPP3Q13368 585 aa12.82□□□□□ -0.36
LIMK2-202ENST00000333611 LLGL1Q15334 1064 aa12.82□□□□□ -0.36
LIMK2-202ENST00000333611 DDB1Q16531 1140 aa12.82□□□□□ -0.36
LIMK2-202ENST00000333611 Q4G0T1 1027 aa12.82□□□□□ -0.36
LIMK2-202ENST00000333611 MIPOL1Q8TD10 442 aa12.82□□□□□ -0.36
LIMK2-202ENST00000333611 PLEKHG4BQ96PX9 1271 aa12.82□□□□□ -0.36
LIMK2-202ENST00000333611 PRDM16Q9HAZ2 1276 aa12.82□□□□□ -0.36
LIMK2-202ENST00000333611 LUC7LQ9NQ29 371 aaKnown RBP12.82□□□□□ -0.36
LIMK2-202ENST00000333611 FGFR1OPO95684 399 aaKnown RBP12.82□□□□□ -0.36
LIMK2-202ENST00000333611 ACTN1P12814 892 aa12.82□□□□□ -0.36
LIMK2-202ENST00000333611 GRIK5Q16478 980 aa12.82□□□□□ -0.36
LIMK2-202ENST00000333611 KLHDC7AQ5VTJ3 777 aa12.82□□□□□ -0.36
LIMK2-202ENST00000333611 KCNK18Q7Z418 384 aa12.82□□□□□ -0.36
LIMK2-202ENST00000333611 SDCCAG8Q86SQ7 713 aaPredicted RBP12.82□□□□□ -0.36
LIMK2-202ENST00000333611 NCAPG2Q86XI2 1143 aa12.82□□□□□ -0.36
LIMK2-202ENST00000333611 WDR66Q8TBY9 1149 aa12.82□□□□□ -0.36
LIMK2-202ENST00000333611 MAGEC3Q8TD91 643 aa12.82□□□□□ -0.36
LIMK2-202ENST00000333611 TMEM237Q96Q45 408 aa12.82□□□□□ -0.36
LIMK2-202ENST00000333611 ERGIC2Q96RQ1 377 aa12.82□□□□□ -0.36
LIMK2-202ENST00000333611 COL1A1P02452 1464 aaPredicted RBP12.82□□□□□ -0.36
LIMK2-202ENST00000333611 ATXN2Q99700 1313 aaKnown RBP12.82□□□□□ -0.36
LIMK2-202ENST00000333611 RBM47A0AV96 593 aaKnown RBP12.82□□□□□ -0.36
LIMK2-202ENST00000333611 SLC37A4O43826 429 aa12.82□□□□□ -0.36
LIMK2-202ENST00000333611 COQ9O75208 318 aa12.82□□□□□ -0.36
LIMK2-202ENST00000333611 FAM83BQ5T0W9 1011 aa12.82□□□□□ -0.36
LIMK2-202ENST00000333611 DAAM2Q86T65 1068 aa12.82□□□□□ -0.36
LIMK2-202ENST00000333611 DNAJC9Q8WXX5 260 aa12.82□□□□□ -0.36
LIMK2-202ENST00000333611 OPTNQ96CV9 577 aa12.82□□□□□ -0.36
LIMK2-202ENST00000333611 BMP2KQ9NSY1 1161 aaPredicted RBP12.82□□□□□ -0.36
LIMK2-202ENST00000333611 DNAJC17Q9NVM6 304 aaKnown RBP12.82□□□□□ -0.36
LIMK2-202ENST00000333611 USP17L5A8MUK1 530 aa12.81□□□□□ -0.36
LIMK2-202ENST00000333611 PPIP5K2O43314 1243 aa12.81□□□□□ -0.36
LIMK2-202ENST00000333611 OPHN1O60890 802 aa12.81□□□□□ -0.36
LIMK2-202ENST00000333611 DRD4P21917 467 aa12.81□□□□□ -0.36
LIMK2-202ENST00000333611 SLC16A2P36021 539 aa12.81□□□□□ -0.36
LIMK2-202ENST00000333611 PSMC4P43686 418 aa12.81□□□□□ -0.36
LIMK2-202ENST00000333611 ZNF131P52739 623 aa12.81□□□□□ -0.36
LIMK2-202ENST00000333611 MRPS35P82673 323 aaKnown RBP12.81□□□□□ -0.36
LIMK2-202ENST00000333611 ZNF844Q08AG5 666 aa12.81□□□□□ -0.36
LIMK2-202ENST00000333611 GRM4Q14833 912 aa12.81□□□□□ -0.36
LIMK2-202ENST00000333611 CFAP157Q5JU67 520 aa12.81□□□□□ -0.36
LIMK2-202ENST00000333611 ANO7Q6IWH7 933 aa12.81□□□□□ -0.36
LIMK2-202ENST00000333611 MYOCDQ8IZQ8 938 aa12.81□□□□□ -0.36
LIMK2-202ENST00000333611 CTNNBL1Q8WYA6 563 aaPredicted RBP12.81□□□□□ -0.36
LIMK2-202ENST00000333611 AZI2Q9H6S1 392 aa12.81□□□□□ -0.36
LIMK2-202ENST00000333611 GLI3P10071 1580 aa12.81□□□□□ -0.36
LIMK2-202ENST00000333611 CHD4Q14839 1912 aa12.81□□□□□ -0.36
LIMK2-202ENST00000333611 CFAP73A6NFT4 308 aa12.81□□□□□ -0.36
LIMK2-202ENST00000333611 CCNFP41002 786 aa12.81□□□□□ -0.36
LIMK2-202ENST00000333611 IFI16Q16666 785 aaKnown RBP12.81□□□□□ -0.36
LIMK2-202ENST00000333611 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.81□□□□□ -0.36
LIMK2-202ENST00000333611 PDXDC1Q6P996 788 aa12.81□□□□□ -0.36
LIMK2-202ENST00000333611 TRIM7Q9C029 511 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms