RNA–Protein interactions for RNA: ENST00000332220.10

YBX1-202, Transcript of Y-box binding protein 1, humanhuman

TSL 5

Gene YBX1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-202ENST00000332220 C16orf59Q7L2K0 433 aa23.38■■□□□ 1.33
YBX1-202ENST00000332220 DEFB128Q7Z7B8 93 aa23.38■■□□□ 1.33
YBX1-202ENST00000332220 RSPH3Q86UC2 560 aa23.38■■□□□ 1.33
YBX1-202ENST00000332220 PNMA5Q96PV4 448 aa23.38■■□□□ 1.33
YBX1-202ENST00000332220 NACC1Q96RE7 527 aa23.38■■□□□ 1.33
YBX1-202ENST00000332220 SUGCTQ9HAC7 445 aa23.38■■□□□ 1.33
YBX1-202ENST00000332220 IL23AQ9NPF7 189 aa23.38■■□□□ 1.33
YBX1-202ENST00000332220 BMP2KQ9NSY1 1161 aaPredicted RBP23.38■■□□□ 1.33
YBX1-202ENST00000332220 DDX19AQ9NUU7 478 aaKnown RBP23.38■■□□□ 1.33
YBX1-202ENST00000332220 SPTLC2O15270 562 aa23.37■■□□□ 1.33
YBX1-202ENST00000332220 NBNO60934 754 aa23.37■■□□□ 1.33
YBX1-202ENST00000332220 XRCC6P12956 609 aaKnown RBP eCLIP23.37■■□□□ 1.331e-9■■■■□ 19.9
YBX1-202ENST00000332220 NUCB2P80303 420 aa23.37■■□□□ 1.33
YBX1-202ENST00000332220 GRB10Q13322 594 aa23.37■■□□□ 1.33
YBX1-202ENST00000332220 SPECC1Q5M775 1068 aa23.37■■□□□ 1.33
YBX1-202ENST00000332220 HYIQ5T013 277 aa23.37■■□□□ 1.33
YBX1-202ENST00000332220 ATL3Q6DD88 541 aa23.37■■□□□ 1.33
YBX1-202ENST00000332220 USP49Q70CQ1 688 aa23.37■■□□□ 1.33
YBX1-202ENST00000332220 KCNK18Q7Z418 384 aa23.37■■□□□ 1.33
YBX1-202ENST00000332220 CABP7Q86V35 215 aa23.37■■□□□ 1.33
YBX1-202ENST00000332220 UBE2OQ9C0C9 1292 aaKnown RBP23.37■■□□□ 1.33
YBX1-202ENST00000332220 DHX33Q9H6R0 707 aaKnown RBP23.37■■□□□ 1.33
YBX1-202ENST00000332220 DBR1Q9UK59 544 aaKnown RBP23.37■■□□□ 1.33
YBX1-202ENST00000332220 CDY2AQ9Y6F7 541 aa23.37■■□□□ 1.33
YBX1-202ENST00000332220 VTNP04004 478 aa23.36■■□□□ 1.33
YBX1-202ENST00000332220 BMP8BP34820 402 aa23.36■■□□□ 1.33
YBX1-202ENST00000332220 RFC2P35250 354 aa23.36■■□□□ 1.33
YBX1-202ENST00000332220 ZRSR1Q15695 479 aaKnown RBP23.36■■□□□ 1.33
YBX1-202ENST00000332220 KRI1Q8N9T8 703 aaKnown RBP23.36■■□□□ 1.33
YBX1-202ENST00000332220 PLIN2Q99541 437 aa23.36■■□□□ 1.33
YBX1-202ENST00000332220 PPME1Q9Y570 386 aa23.36■■□□□ 1.33
YBX1-202ENST00000332220 KDM3AQ9Y4C1 1321 aa23.35■■□□□ 1.33
YBX1-202ENST00000332220 E9PMD0 336 aa23.35■■□□□ 1.33
YBX1-202ENST00000332220 PPP6R2O75170 966 aa23.35■■□□□ 1.33
YBX1-202ENST00000332220 RPLP2P05387 115 aaKnown RBP23.35■■□□□ 1.33
YBX1-202ENST00000332220 RFC5P40937 340 aa23.35■■□□□ 1.33
YBX1-202ENST00000332220 POLGP54098 1239 aaPredicted RBP23.35■■□□□ 1.33
YBX1-202ENST00000332220 EMC2Q15006 297 aa23.35■■□□□ 1.33
YBX1-202ENST00000332220 TMEM240Q5SV17 173 aa23.35■■□□□ 1.33
YBX1-202ENST00000332220 NME8Q8N427 588 aa23.35■■□□□ 1.33
YBX1-202ENST00000332220 EPSTI1Q96J88 318 aa23.35■■□□□ 1.33
YBX1-202ENST00000332220 CCDC43Q96MW1 224 aaKnown RBP23.35■■□□□ 1.33
YBX1-202ENST00000332220 PPP1R16BQ96T49 567 aa23.35■■□□□ 1.33
YBX1-202ENST00000332220 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.35■■□□□ 1.338e-7■■■□□ 18.6
YBX1-202ENST00000332220 XPNPEP1Q9NQW7 623 aa23.35■■□□□ 1.33
YBX1-202ENST00000332220 COLQQ9Y215 455 aaPredicted RBP23.35■■□□□ 1.33
YBX1-202ENST00000332220 AKT3Q9Y243 479 aa23.35■■□□□ 1.33
YBX1-202ENST00000332220 TRPV2Q9Y5S1 764 aa23.35■■□□□ 1.33
YBX1-202ENST00000332220 CXCL10P02778 98 aa23.34■■□□□ 1.33
YBX1-202ENST00000332220 TMOD1P28289 359 aa23.34■■□□□ 1.33
YBX1-202ENST00000332220 UBA7P41226 1012 aa23.34■■□□□ 1.33
YBX1-202ENST00000332220 TMEM119Q4V9L6 283 aa23.34■■□□□ 1.33
YBX1-202ENST00000332220 C9orf50Q5SZB4 431 aa23.34■■□□□ 1.33
YBX1-202ENST00000332220 IER5Q5VY09 327 aa23.34■■□□□ 1.33
YBX1-202ENST00000332220 ZNF365Q70YC5 407 aa23.34■■□□□ 1.33
YBX1-202ENST00000332220 LRRC15Q8TF66 581 aa23.34■■□□□ 1.33
YBX1-202ENST00000332220 SLC7A3Q8WY07 619 aa23.34■■□□□ 1.33
YBX1-202ENST00000332220 CELF4Q9BZC1 486 aaKnown RBP23.34■■□□□ 1.33
YBX1-202ENST00000332220 CDHR5Q9HBB8 845 aa23.34■■□□□ 1.33
YBX1-202ENST00000332220 CFAP45Q9UL16 551 aa23.34■■□□□ 1.33
YBX1-202ENST00000332220 USO1O60763 962 aaKnown RBP23.33■■□□□ 1.33
YBX1-202ENST00000332220 PARNO95453 639 aaKnown RBP23.33■■□□□ 1.33
YBX1-202ENST00000332220 NCLP19338 710 aaKnown RBP23.33■■□□□ 1.33
YBX1-202ENST00000332220 KARSQ15046 597 aaKnown RBP23.33■■□□□ 1.33
YBX1-202ENST00000332220 SHHQ15465 462 aa23.33■■□□□ 1.33
YBX1-202ENST00000332220 KIZQ2M2Z5 673 aa23.33■■□□□ 1.33
YBX1-202ENST00000332220 TCTN1Q2MV58 587 aa23.33■■□□□ 1.33
YBX1-202ENST00000332220 RPUSD2Q8IZ73 545 aaKnown RBP23.33■■□□□ 1.33
YBX1-202ENST00000332220 SYMPKQ92797 1274 aaKnown RBP23.33■■□□□ 1.33
YBX1-202ENST00000332220 TMEM143Q96AN5 459 aa23.33■■□□□ 1.33
YBX1-202ENST00000332220 ZNF668Q96K58 619 aaPredicted RBP23.33■■□□□ 1.33
YBX1-202ENST00000332220 MAP7D2Q96T17 732 aa23.33■■□□□ 1.33
YBX1-202ENST00000332220 JPH2Q9BR39 696 aaPredicted RBP23.33■■□□□ 1.33
YBX1-202ENST00000332220 CCSER1Q9C0I3 900 aa23.33■■□□□ 1.33
YBX1-202ENST00000332220 BHMT2Q9H2M3 363 aa23.33■■□□□ 1.33
YBX1-202ENST00000332220 RCOR1Q9UKL0 485 aa23.33■■□□□ 1.33
YBX1-202ENST00000332220 ARHGEF35A5YM69 484 aa23.32■■□□□ 1.32
YBX1-202ENST00000332220 M0QZ92 97 aa23.32■■□□□ 1.32
YBX1-202ENST00000332220 SLC26A4O43511 780 aa23.32■■□□□ 1.32
YBX1-202ENST00000332220 GPR32O75388 356 aa23.32■■□□□ 1.32
YBX1-202ENST00000332220 EYA4O95677 639 aa23.32■■□□□ 1.32
YBX1-202ENST00000332220 GHRP10912 638 aa23.32■■□□□ 1.32
YBX1-202ENST00000332220 KRT85P78386 507 aa23.32■■□□□ 1.32
YBX1-202ENST00000332220 FBXO47Q5MNV8 452 aa23.32■■□□□ 1.32
YBX1-202ENST00000332220 KCNG4Q8TDN1 519 aa23.32■■□□□ 1.32
YBX1-202ENST00000332220 CDK5RAP3Q96JB5 506 aa23.32■■□□□ 1.32
YBX1-202ENST00000332220 MTRQ99707 1265 aa23.32■■□□□ 1.32
YBX1-202ENST00000332220 NT5C3AQ9H0P0 336 aa23.32■■□□□ 1.32
YBX1-202ENST00000332220 SUCLA2Q9P2R7 463 aaPredicted RBP23.32■■□□□ 1.32
YBX1-202ENST00000332220 DNM3Q9UQ16 869 aa23.32■■□□□ 1.32
YBX1-202ENST00000332220 GINS2Q9Y248 185 aa23.32■■□□□ 1.32
YBX1-202ENST00000332220 ATP6V1DQ9Y5K8 247 aa23.32■■□□□ 1.32
YBX1-202ENST00000332220 CUTAO60888 179 aa23.31■■□□□ 1.32
YBX1-202ENST00000332220 DGAT1O75907 488 aa23.31■■□□□ 1.32
YBX1-202ENST00000332220 PFKMP08237 780 aa23.31■■□□□ 1.32
YBX1-202ENST00000332220 PLCG1P19174 1290 aa23.31■■□□□ 1.32
YBX1-202ENST00000332220 DNM2P50570 870 aa23.31■■□□□ 1.32
YBX1-202ENST00000332220 GPC3P51654 580 aa23.31■■□□□ 1.32
YBX1-202ENST00000332220 NLRP11P59045 1033 aaKnown RBP23.31■■□□□ 1.32
YBX1-202ENST00000332220 LPIN1Q14693 890 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms