RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 FAM26FQ5R3K3 315 aa22.24■■□□□ 1.15
CMTM4-201ENST00000330687 CAPN12Q6ZSI9 719 aa22.24■■□□□ 1.15
CMTM4-201ENST00000330687 UNC13DQ70J99 1090 aa22.24■■□□□ 1.15
CMTM4-201ENST00000330687 USP17L1Q7RTZ2 530 aa22.24■■□□□ 1.15
CMTM4-201ENST00000330687 GLYCTKQ8IVS8 523 aa22.24■■□□□ 1.15
CMTM4-201ENST00000330687 FGD4Q96M96 766 aa22.24■■□□□ 1.15
CMTM4-201ENST00000330687 CUEDC2Q9H467 287 aa22.24■■□□□ 1.15
CMTM4-201ENST00000330687 MCM9Q9NXL9 1143 aa22.24■■□□□ 1.15
CMTM4-201ENST00000330687 ARMCX3Q9UH62 379 aaPredicted RBP22.24■■□□□ 1.15
CMTM4-201ENST00000330687 RASAL2Q9UJF2 1139 aa22.24■■□□□ 1.15
CMTM4-201ENST00000330687 A0A1W2PRG0 241 aa22.24■■□□□ 1.15
CMTM4-201ENST00000330687 SMCO2A6NFE2 343 aa22.24■■□□□ 1.15
CMTM4-201ENST00000330687 A6NHS1 94 aa22.24■■□□□ 1.15
CMTM4-201ENST00000330687 PPFIA2O75334 1257 aa22.24■■□□□ 1.15
CMTM4-201ENST00000330687 PDCD2Q16342 344 aaPredicted RBP22.24■■□□□ 1.15
CMTM4-201ENST00000330687 KCNK18Q7Z418 384 aa22.24■■□□□ 1.15
CMTM4-201ENST00000330687 EXOC3L1Q86VI1 746 aa22.24■■□□□ 1.15
CMTM4-201ENST00000330687 GUF1Q8N442 669 aaKnown RBP22.24■■□□□ 1.15
CMTM4-201ENST00000330687 RAB3IPQ96QF0 476 aaPredicted RBP22.24■■□□□ 1.15
CMTM4-201ENST00000330687 PITPNM3Q9BZ71 974 aa22.24■■□□□ 1.15
CMTM4-201ENST00000330687 MKNK2Q9HBH9 465 aa22.24■■□□□ 1.15
CMTM4-201ENST00000330687 CBX6O95503 412 aa22.24■■□□□ 1.15
CMTM4-201ENST00000330687 SERPINB4P48594 390 aa22.24■■□□□ 1.15
CMTM4-201ENST00000330687 NONOQ15233 471 aaKnown RBP eCLIP22.24■■□□□ 1.15
CMTM4-201ENST00000330687 VGLL2Q8N8G2 317 aa22.24■■□□□ 1.15
CMTM4-201ENST00000330687 PIGOQ8TEQ8 1089 aa22.24■■□□□ 1.15
CMTM4-201ENST00000330687 ATP8B4Q8TF62 1192 aa22.24■■□□□ 1.15
CMTM4-201ENST00000330687 CENPTQ96BT3 561 aa22.24■■□□□ 1.15
CMTM4-201ENST00000330687 VCXQ9H320 206 aa22.24■■□□□ 1.15
CMTM4-201ENST00000330687 AGTP01019 485 aa22.23■■□□□ 1.15
CMTM4-201ENST00000330687 UBTFL6P0CB48 400 aaPredicted RBP22.23■■□□□ 1.15
CMTM4-201ENST00000330687 ZCCHC18P0CG32 403 aa22.23■■□□□ 1.15
CMTM4-201ENST00000330687 LRRC63Q05C16 580 aa22.23■■□□□ 1.15
CMTM4-201ENST00000330687 CUL3Q13618 768 aa22.23■■□□□ 1.15
CMTM4-201ENST00000330687 MIGA2Q7L4E1 593 aa22.23■■□□□ 1.15
CMTM4-201ENST00000330687 NLRP10Q86W26 655 aa22.23■■□□□ 1.15
CMTM4-201ENST00000330687 MFN1Q8IWA4 741 aa22.23■■□□□ 1.15
CMTM4-201ENST00000330687 SH3RF3Q8TEJ3 882 aaPredicted RBP22.23■■□□□ 1.15
CMTM4-201ENST00000330687 DYNLL2Q96FJ2 89 aa22.23■■□□□ 1.15
CMTM4-201ENST00000330687 GSTTP1A0A1W2PQM5 241 aa22.23■■□□□ 1.15
CMTM4-201ENST00000330687 CNGA1P29973 690 aa22.23■■□□□ 1.15
CMTM4-201ENST00000330687 PPP1R2P41236 205 aa22.23■■□□□ 1.15
CMTM4-201ENST00000330687 PTDSS1P48651 473 aaKnown RBP22.23■■□□□ 1.15
CMTM4-201ENST00000330687 GBP7Q8N8V2 638 aaPredicted RBP22.23■■□□□ 1.15
CMTM4-201ENST00000330687 TOPAZ1Q8N9V7 1692 aa22.23■■□□□ 1.15
CMTM4-201ENST00000330687 CETN3O15182 167 aa22.22■■□□□ 1.15
CMTM4-201ENST00000330687 RCAN1P53805 252 aa22.22■■□□□ 1.15
CMTM4-201ENST00000330687 CALCRLQ16602 461 aa22.22■■□□□ 1.15
CMTM4-201ENST00000330687 KRT79Q5XKE5 535 aa22.22■■□□□ 1.15
CMTM4-201ENST00000330687 BMP2KQ9NSY1 1161 aaPredicted RBP22.22■■□□□ 1.15
CMTM4-201ENST00000330687 RGL1Q9NZL6 768 aa22.22■■□□□ 1.15
CMTM4-201ENST00000330687 SUGT1Q9Y2Z0 365 aa22.22■■□□□ 1.15
CMTM4-201ENST00000330687 FLT1P17948 1338 aa22.22■■□□□ 1.15
CMTM4-201ENST00000330687 SCNN1BP51168 640 aa22.22■■□□□ 1.15
CMTM4-201ENST00000330687 GALCP54803 685 aa22.22■■□□□ 1.15
CMTM4-201ENST00000330687 EAPPQ56P03 285 aaPredicted RBP22.22■■□□□ 1.15
CMTM4-201ENST00000330687 STMN4Q9H169 189 aaPredicted RBP22.22■■□□□ 1.15
CMTM4-201ENST00000330687 RNPEPL1Q9HAU8 725 aa22.22■■□□□ 1.15
CMTM4-201ENST00000330687 ARHGEF3Q9NR81 526 aa22.22■■□□□ 1.15
CMTM4-201ENST00000330687 NKIRAS1Q9NYS0 192 aa22.22■■□□□ 1.15
CMTM4-201ENST00000330687 ANKRD33BA6NCL7 494 aa22.22■■□□□ 1.15
CMTM4-201ENST00000330687 NR2F2P24468 414 aa22.22■■□□□ 1.15
CMTM4-201ENST00000330687 MRPS35P82673 323 aaKnown RBP22.22■■□□□ 1.15
CMTM4-201ENST00000330687 AUHQ13825 339 aaKnown RBP22.22■■□□□ 1.15
CMTM4-201ENST00000330687 BICDL1Q6ZP65 573 aa22.22■■□□□ 1.15
CMTM4-201ENST00000330687 SYCP3Q8IZU3 236 aa22.22■■□□□ 1.15
CMTM4-201ENST00000330687 GBP5Q96PP8 586 aa22.22■■□□□ 1.15
CMTM4-201ENST00000330687 KCNMB3Q9NPA1 279 aa22.22■■□□□ 1.15
CMTM4-201ENST00000330687 SCOCQ9UIL1 159 aa22.22■■□□□ 1.15
CMTM4-201ENST00000330687 LTN1O94822 1766 aa22.22■■□□□ 1.15
CMTM4-201ENST00000330687 ECM29Q5VYK3 1845 aa22.22■■□□□ 1.15
CMTM4-201ENST00000330687 SPAG7O75391 227 aa22.21■■□□□ 1.15
CMTM4-201ENST00000330687 CALB2P22676 271 aa22.21■■□□□ 1.15
CMTM4-201ENST00000330687 RPL21P46778 160 aaKnown RBP22.21■■□□□ 1.15
CMTM4-201ENST00000330687 TNNI2P48788 182 aa22.21■■□□□ 1.15
CMTM4-201ENST00000330687 ARHGAP22Q7Z5H3 698 aa22.21■■□□□ 1.15
CMTM4-201ENST00000330687 POP1Q99575 1024 aaKnown RBP22.21■■□□□ 1.15
CMTM4-201ENST00000330687 RBAK-RBAKDNI3L0D1 243 aa22.21■■□□□ 1.15
CMTM4-201ENST00000330687 DNAJC3Q13217 504 aa22.21■■□□□ 1.15
CMTM4-201ENST00000330687 GRB10Q13322 594 aa22.21■■□□□ 1.15
CMTM4-201ENST00000330687 EXOC3L4Q17RC7 722 aa22.21■■□□□ 1.15
CMTM4-201ENST00000330687 TMEM266Q2M3C6 531 aa22.21■■□□□ 1.15
CMTM4-201ENST00000330687 NEK8Q86SG6 692 aa22.21■■□□□ 1.15
CMTM4-201ENST00000330687 CCNJLQ8IV13 435 aa22.21■■□□□ 1.15
CMTM4-201ENST00000330687 CTNNBL1Q8WYA6 563 aaPredicted RBP22.21■■□□□ 1.15
CMTM4-201ENST00000330687 PGM2Q96G03 612 aa22.21■■□□□ 1.15
CMTM4-201ENST00000330687 MMTAG2Q9BU76 263 aaKnown RBP22.21■■□□□ 1.15
CMTM4-201ENST00000330687 RXFP1Q9HBX9 757 aa22.21■■□□□ 1.15
CMTM4-201ENST00000330687 PCDHB13Q9Y5F0 798 aa22.21■■□□□ 1.15
CMTM4-201ENST00000330687 RAD21O60216 631 aa22.21■■□□□ 1.15
CMTM4-201ENST00000330687 UCHL3P15374 230 aa22.21■■□□□ 1.15
CMTM4-201ENST00000330687 SPOCK2Q92563 424 aa22.21■■□□□ 1.15
CMTM4-201ENST00000330687 MYLK2Q9H1R3 596 aa22.21■■□□□ 1.15
CMTM4-201ENST00000330687 BLOC1S4Q9NUP1 217 aa22.21■■□□□ 1.15
CMTM4-201ENST00000330687 ALDH3A1P30838 453 aa22.2■■□□□ 1.14
CMTM4-201ENST00000330687 PEX5P50542 639 aa22.2■■□□□ 1.14
CMTM4-201ENST00000330687 ARHGAP44Q17R89 818 aa22.2■■□□□ 1.14
CMTM4-201ENST00000330687 NT5DC3Q86UY8 548 aa22.2■■□□□ 1.14
CMTM4-201ENST00000330687 THEMISQ8N1K5 641 aaPredicted RBP22.2■■□□□ 1.14
CMTM4-201ENST00000330687 LRRC57Q8N9N7 239 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms