RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 NUDT10Q8NFP7 164 aa2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 NUDT11Q96G61 164 aa2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 TACO1Q9BSH4 297 aaKnown RBP2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 ADAM29Q9UKF5 820 aa2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 COQ6Q9Y2Z9 468 aa2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 ZDHHC9Q9Y397 364 aa2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP2.39□□□□□ -2.03
CCDC144A-201ENST00000328495 TCRBV16S1A1N1A0A5B0 115 aa2.39□□□□□ -2.03
CCDC144A-201ENST00000328495 SLC12A8A0AV02 714 aa2.39□□□□□ -2.03
CCDC144A-201ENST00000328495 HIP1RO75146 1068 aa2.39□□□□□ -2.03
CCDC144A-201ENST00000328495 KLHL18O94889 574 aa2.39□□□□□ -2.03
CCDC144A-201ENST00000328495 ADRB1P08588 477 aa2.39□□□□□ -2.03
CCDC144A-201ENST00000328495 PTGS1P23219 599 aa2.39□□□□□ -2.03
CCDC144A-201ENST00000328495 ZNF568Q3ZCX4 644 aa2.39□□□□□ -2.03
CCDC144A-201ENST00000328495 FNDC3BQ53EP0 1204 aaKnown RBP2.39□□□□□ -2.03
CCDC144A-201ENST00000328495 Q6ZUG5 572 aa2.39□□□□□ -2.03
CCDC144A-201ENST00000328495 WDR48Q8TAF3 677 aa2.39□□□□□ -2.03
CCDC144A-201ENST00000328495 KCNK3O14649 394 aa2.39□□□□□ -2.03
CCDC144A-201ENST00000328495 CUTAO60888 179 aa2.39□□□□□ -2.03
CCDC144A-201ENST00000328495 C4BPAP04003 597 aaKnown RBP2.39□□□□□ -2.03
CCDC144A-201ENST00000328495 AOAHP28039 575 aa2.39□□□□□ -2.03
CCDC144A-201ENST00000328495 DDX53Q86TM3 631 aaKnown RBP2.39□□□□□ -2.03
CCDC144A-201ENST00000328495 TTC9BQ8N6N2 239 aa2.39□□□□□ -2.03
CCDC144A-201ENST00000328495 SCLYQ96I15 445 aa2.39□□□□□ -2.03
CCDC144A-201ENST00000328495 AJUBAQ96IF1 538 aa2.39□□□□□ -2.03
CCDC144A-201ENST00000328495 LOXL4Q96JB6 756 aa2.39□□□□□ -2.03
CCDC144A-201ENST00000328495 SAMD11Q96NU1 681 aa2.39□□□□□ -2.03
CCDC144A-201ENST00000328495 KRTAP4-9Q9BYQ8 210 aa2.39□□□□□ -2.03
CCDC144A-201ENST00000328495 TRIM39Q9HCM9 518 aa2.39□□□□□ -2.03
CCDC144A-201ENST00000328495 JADE2Q9NQC1 790 aa2.39□□□□□ -2.03
CCDC144A-201ENST00000328495 INCENPQ9NQS7 918 aa2.39□□□□□ -2.03
CCDC144A-201ENST00000328495 KCNH7Q9NS40 1196 aa2.39□□□□□ -2.03
CCDC144A-201ENST00000328495 NPATQ14207 1427 aa2.39□□□□□ -2.03
CCDC144A-201ENST00000328495 SCDO00767 359 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 IL18BPO95998 194 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 EPHB4P54760 987 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 PPP2CBP62714 309 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 PPP2CAP67775 309 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 WDR72Q3MJ13 1102 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 TMEM177Q53S58 311 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 CPZQ66K79 652 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 FGD2Q7Z6J4 655 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 NPM2Q86SE8 214 aaKnown RBP2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 NOSTRINQ8IVI9 506 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 C2orf69Q8N8R5 385 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 IGSF22Q8N9C0 903 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 RBM15Q96T37 977 aaKnown RBP eCLIP2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 SMPD4Q9NXE4 827 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 GALNT8Q9NY28 637 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 FBXO10Q9UK96 956 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 NRXN3Q9Y4C0 1643 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 ATP10DQ9P241 1426 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 NPEPPSL1A6NEC2 478 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 B4GALT4O60513 344 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 POLD1P28340 1107 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 IGFALSP35858 605 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 USP10Q14694 798 aaKnown RBP2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 CCDC144BQ3MJ40 725 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 CXXC5Q7LFL8 322 aaKnown RBP2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 OVCH1Q7RTY7 1134 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 SH3TC2Q8TF17 1288 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 BOCQ9BWV1 1114 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 DCAF1Q9Y4B6 1507 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 MYOM1P52179 1685 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 UNC79Q9P2D8 2635 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 FOXP2O15409 715 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 OPA1O60313 960 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 RAPGEF3O95398 923 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 CSF2RBP32927 897 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 FLT3P36888 993 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 MAGEA10P43363 369 aaPredicted RBP2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 IRF9Q00978 393 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 SQSTM1Q13501 440 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 ARHGAP44Q17R89 818 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 FRMPD1Q5SYB0 1578 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 SLFN13Q68D06 897 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 DBX2Q6ZNG2 339 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 CIR1Q86X95 450 aaPredicted RBP2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 SYNPOQ8N3V7 929 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 HIPK4Q8NE63 616 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 CHST13Q8NET6 341 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 CARD11Q9BXL7 1154 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 KRTAP17-1Q9BYP8 105 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 KATNBL1Q9H079 304 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 BTBD7Q9P203 1132 aa2.38□□□□□ -2.03
CCDC144A-201ENST00000328495 CAMSAP1Q5T5Y3 1602 aa2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 ESYT3A0FGR9 886 aa2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 ASLP04424 464 aa2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 MMEP08473 750 aa2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 ITGB8P26012 769 aa2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 MC4RP32245 332 aa2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 ETV4P43268 484 aa2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 TOP3AQ13472 1001 aaPredicted RBP2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 ZMAT1Q5H9K5 638 aa2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 ZCCHC8Q6NZY4 707 aaKnown RBP2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 GPR155Q7Z3F1 870 aa2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 CALML6Q8TD86 181 aa2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 GBP4Q96PP9 640 aa2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 BTBD2Q9BX70 525 aa2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 SEC61A2Q9H9S3 476 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms