RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 TAC1P20366 129 aa17.58■□□□□ 0.4
SMAD3-201ENST00000327367 AP1B1Q10567 949 aa17.58■□□□□ 0.4
SMAD3-201ENST00000327367 ZBED8Q8IZ13 594 aa17.58■□□□□ 0.4
SMAD3-201ENST00000327367 ANAPC7Q9UJX3 599 aa17.58■□□□□ 0.4
SMAD3-201ENST00000327367 TLR3O15455 904 aaKnown RBP17.58■□□□□ 0.4
SMAD3-201ENST00000327367 DMPKQ09013 629 aa17.58■□□□□ 0.4
SMAD3-201ENST00000327367 MED21Q13503 144 aa17.58■□□□□ 0.4
SMAD3-201ENST00000327367 KCTD1Q719H9 257 aa17.58■□□□□ 0.4
SMAD3-201ENST00000327367 ARHGEF25Q86VW2 580 aa17.58■□□□□ 0.4
SMAD3-201ENST00000327367 KCNF1Q9H3M0 494 aa17.58■□□□□ 0.4
SMAD3-201ENST00000327367 MAP3K19Q56UN5 1328 aa17.57■□□□□ 0.4
SMAD3-201ENST00000327367 SNAPC4Q5SXM2 1469 aa17.57■□□□□ 0.4
SMAD3-201ENST00000327367 ATP6V1B1P15313 513 aa17.57■□□□□ 0.4
SMAD3-201ENST00000327367 PSMA2P25787 234 aa17.57■□□□□ 0.4
SMAD3-201ENST00000327367 DHX40Q8IX18 779 aaKnown RBP17.57■□□□□ 0.4
SMAD3-201ENST00000327367 SNX19Q92543 992 aa17.57■□□□□ 0.4
SMAD3-201ENST00000327367 ANKRD36BP1Q96IX9 119 aa17.57■□□□□ 0.4
SMAD3-201ENST00000327367 TAF1DQ9H5J8 278 aaPredicted RBP17.57■□□□□ 0.4
SMAD3-201ENST00000327367 DDX42Q86XP3 938 aaKnown RBP eCLIP17.57■□□□□ 0.4
SMAD3-201ENST00000327367 SH3GL1Q99961 368 aa17.57■□□□□ 0.4
SMAD3-201ENST00000327367 KMT5AQ9NQR1 393 aa17.57■□□□□ 0.4
SMAD3-201ENST00000327367 DBR1Q9UK59 544 aaKnown RBP17.57■□□□□ 0.4
SMAD3-201ENST00000327367 TRIM33Q9UPN9 1127 aa17.57■□□□□ 0.4
SMAD3-201ENST00000327367 CCNE1P24864 410 aa17.57■□□□□ 0.4
SMAD3-201ENST00000327367 SLC16A2P36021 539 aa17.57■□□□□ 0.4
SMAD3-201ENST00000327367 MKRN4PQ13434 485 aaPredicted RBP17.57■□□□□ 0.4
SMAD3-201ENST00000327367 FAM47CQ5HY64 1035 aa17.57■□□□□ 0.4
SMAD3-201ENST00000327367 CEP78Q5JTW2 689 aa17.57■□□□□ 0.4
SMAD3-201ENST00000327367 SOS2Q07890 1332 aaPredicted RBP17.57■□□□□ 0.4
SMAD3-201ENST00000327367 CTCFP49711 727 aaPredicted RBP17.57■□□□□ 0.4
SMAD3-201ENST00000327367 ACCSQ96QU6 501 aa17.57■□□□□ 0.4
SMAD3-201ENST00000327367 NPATQ14207 1427 aa17.57■□□□□ 0.4
SMAD3-201ENST00000327367 KCNQ3O43525 872 aa17.57■□□□□ 0.4
SMAD3-201ENST00000327367 CUL4AQ13619 759 aa17.57■□□□□ 0.4
SMAD3-201ENST00000327367 PPP6R3Q5H9R7 873 aaPredicted RBP17.57■□□□□ 0.4
SMAD3-201ENST00000327367 TTC30BQ8N4P2 665 aa17.57■□□□□ 0.4
SMAD3-201ENST00000327367 RNF25Q96BH1 459 aaPredicted RBP17.57■□□□□ 0.4
SMAD3-201ENST00000327367 IRX2Q9BZI1 471 aaPredicted RBP17.57■□□□□ 0.4
SMAD3-201ENST00000327367 HEY1Q9Y5J3 304 aa17.57■□□□□ 0.4
SMAD3-201ENST00000327367 IVNS1ABPQ9Y6Y0 642 aa17.57■□□□□ 0.4
SMAD3-201ENST00000327367 CCDC188H7C350 402 aa17.56■□□□□ 0.4
SMAD3-201ENST00000327367 TCN1P20061 433 aaPredicted RBP17.56■□□□□ 0.4
SMAD3-201ENST00000327367 PDIA2Q13087 525 aaKnown RBP17.56■□□□□ 0.4
SMAD3-201ENST00000327367 ANKMY2Q8IV38 441 aa17.56■□□□□ 0.4
SMAD3-201ENST00000327367 COG1Q8WTW3 980 aa17.56■□□□□ 0.4
SMAD3-201ENST00000327367 DNAJC9Q8WXX5 260 aa17.56■□□□□ 0.4
SMAD3-201ENST00000327367 SEC16BQ96JE7 1060 aa17.56■□□□□ 0.4
SMAD3-201ENST00000327367 UBN2Q6ZU65 1347 aa17.56■□□□□ 0.4
SMAD3-201ENST00000327367 EIF3HO15372 352 aaKnown RBP eCLIP17.56■□□□□ 0.4
SMAD3-201ENST00000327367 TMCO5AQ8N6Q1 288 aa17.56■□□□□ 0.4
SMAD3-201ENST00000327367 TEX9Q8N6V9 391 aa17.56■□□□□ 0.4
SMAD3-201ENST00000327367 CNBD2Q96M20 576 aa17.56■□□□□ 0.4
SMAD3-201ENST00000327367 ZFYVE9O95405 1425 aa17.56■□□□□ 0.4
SMAD3-201ENST00000327367 NEMP1O14524 444 aa17.56■□□□□ 0.4
SMAD3-201ENST00000327367 TEX33O43247 280 aa17.56■□□□□ 0.4
SMAD3-201ENST00000327367 SCNN1DP51172 638 aa17.56■□□□□ 0.4
SMAD3-201ENST00000327367 TJAP1Q5JTD0 557 aa17.56■□□□□ 0.4
SMAD3-201ENST00000327367 SSH3Q8TE77 659 aa17.56■□□□□ 0.4
SMAD3-201ENST00000327367 C1orf54Q8WWF1 131 aa17.56■□□□□ 0.4
SMAD3-201ENST00000327367 ADPGKQ9BRR6 497 aa17.56■□□□□ 0.4
SMAD3-201ENST00000327367 MAGEF1Q9HAY2 307 aa17.56■□□□□ 0.4
SMAD3-201ENST00000327367 DMC1Q14565 340 aa17.56■□□□□ 0.4
SMAD3-201ENST00000327367 ZNF394Q53GI3 561 aa17.56■□□□□ 0.4
SMAD3-201ENST00000327367 NEUROG2Q9H2A3 272 aa17.56■□□□□ 0.4
SMAD3-201ENST00000327367 CHCHD3Q9NX63 227 aaKnown RBP17.56■□□□□ 0.4
SMAD3-201ENST00000327367 WDR7Q9Y4E6 1490 aa17.56■□□□□ 0.4
SMAD3-201ENST00000327367 ASZ1Q8WWH4 475 aa17.56■□□□□ 0.4
SMAD3-201ENST00000327367 COA7Q96BR5 231 aa17.56■□□□□ 0.4
SMAD3-201ENST00000327367 TMA16Q96EY4 203 aaKnown RBP17.56■□□□□ 0.4
SMAD3-201ENST00000327367 ZNF577Q9BSK1 485 aa17.56■□□□□ 0.4
SMAD3-201ENST00000327367 HMGB2P26583 209 aaKnown RBP17.55■□□□□ 0.4
SMAD3-201ENST00000327367 CYLC2Q14093 348 aaPredicted RBP17.55■□□□□ 0.4
SMAD3-201ENST00000327367 DEPDC1Q5TB30 811 aa17.55■□□□□ 0.4
SMAD3-201ENST00000327367 SPICE1Q8N0Z3 855 aa17.55■□□□□ 0.4
SMAD3-201ENST00000327367 HEXIM2Q96MH2 286 aaKnown RBP17.55■□□□□ 0.4
SMAD3-201ENST00000327367 NOC2LQ9Y3T9 749 aaKnown RBP17.55■□□□□ 0.4
SMAD3-201ENST00000327367 TJP3O95049 919 aa17.55■□□□□ 0.4
SMAD3-201ENST00000327367 UBE2SQ16763 222 aa17.55■□□□□ 0.4
SMAD3-201ENST00000327367 TEDDM1Q5T9Z0 273 aa17.55■□□□□ 0.4
SMAD3-201ENST00000327367 SARM1Q6SZW1 724 aa17.55■□□□□ 0.4
SMAD3-201ENST00000327367 FRA10AC1Q70Z53 315 aa17.55■□□□□ 0.4
SMAD3-201ENST00000327367 MARCOQ9UEW3 520 aaPredicted RBP17.55■□□□□ 0.4
SMAD3-201ENST00000327367 PCDHA1Q9Y5I3 950 aa17.55■□□□□ 0.4
SMAD3-201ENST00000327367 BNIP3LO60238 219 aa17.55■□□□□ 0.4
SMAD3-201ENST00000327367 TSC22D2O75157 780 aa17.55■□□□□ 0.4
SMAD3-201ENST00000327367 HSPA9P38646 679 aaKnown RBP17.55■□□□□ 0.4
SMAD3-201ENST00000327367 KRT17Q04695 432 aa17.55■□□□□ 0.4
SMAD3-201ENST00000327367 RSRC2Q7L4I2 434 aaKnown RBP17.55■□□□□ 0.4
SMAD3-201ENST00000327367 FAM81BQ96LP2 452 aa17.55■□□□□ 0.4
SMAD3-201ENST00000327367 HPS4Q9NQG7 708 aa17.55■□□□□ 0.4
SMAD3-201ENST00000327367 MID2Q9UJV3 735 aa17.55■□□□□ 0.4
SMAD3-201ENST00000327367 H0Y626 953 aa17.55■□□□□ 0.4
SMAD3-201ENST00000327367 TRIM16O95361 564 aa17.55■□□□□ 0.4
SMAD3-201ENST00000327367 GPS1Q13098 491 aa17.55■□□□□ 0.4
SMAD3-201ENST00000327367 TBCCQ15814 346 aa17.55■□□□□ 0.4
SMAD3-201ENST00000327367 ACBD5Q5T8D3 534 aaPredicted RBP17.55■□□□□ 0.4
SMAD3-201ENST00000327367 NUP93Q8N1F7 819 aa17.55■□□□□ 0.4
SMAD3-201ENST00000327367 SRPRBQ9Y5M8 271 aaKnown RBP17.55■□□□□ 0.4
SMAD3-201ENST00000327367 PPP1R37O75864 691 aa17.54■□□□□ 0.4
SMAD3-201ENST00000327367 SERPINB10P48595 397 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms