RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 HERC4Q5GLZ8 1057 aaPredicted RBP11.35□□□□□ -0.59
VIPAS39-201ENST00000327028 SFR1Q86XK3 245 aa11.35□□□□□ -0.59
VIPAS39-201ENST00000327028 SMYD4Q8IYR2 804 aaPredicted RBP11.35□□□□□ -0.59
VIPAS39-201ENST00000327028 KIAA0895Q8NCT3 520 aa11.35□□□□□ -0.59
VIPAS39-201ENST00000327028 RBSNQ9H1K0 784 aa11.35□□□□□ -0.59
VIPAS39-201ENST00000327028 ZHX3Q9H4I2 956 aa11.35□□□□□ -0.59
VIPAS39-201ENST00000327028 DHX33Q9H6R0 707 aaKnown RBP11.35□□□□□ -0.59
VIPAS39-201ENST00000327028 XPNPEP3Q9NQH7 507 aa11.35□□□□□ -0.59
VIPAS39-201ENST00000327028 XPNPEP1Q9NQW7 623 aa11.35□□□□□ -0.59
VIPAS39-201ENST00000327028 OLFML3Q9NRN5 406 aa11.35□□□□□ -0.59
VIPAS39-201ENST00000327028 PCDHA2Q9Y5H9 948 aa11.35□□□□□ -0.59
VIPAS39-201ENST00000327028 ZBTB42B2RXF5 422 aa11.35□□□□□ -0.59
VIPAS39-201ENST00000327028 PPP1R3GB7ZBB8 358 aa11.35□□□□□ -0.59
VIPAS39-201ENST00000327028 H3BRB1 525 aa11.35□□□□□ -0.59
VIPAS39-201ENST00000327028 KPNA6O60684 536 aa11.35□□□□□ -0.59
VIPAS39-201ENST00000327028 ADAMTS4O75173 837 aa11.35□□□□□ -0.59
VIPAS39-201ENST00000327028 CD44P16070 742 aaKnown RBP11.35□□□□□ -0.59
VIPAS39-201ENST00000327028 PPP1R2P41236 205 aa11.35□□□□□ -0.59
VIPAS39-201ENST00000327028 IRX5P78411 483 aaPredicted RBP11.35□□□□□ -0.59
VIPAS39-201ENST00000327028 BEX3Q00994 111 aa11.35□□□□□ -0.59
VIPAS39-201ENST00000327028 STK4Q13043 487 aa11.35□□□□□ -0.59
VIPAS39-201ENST00000327028 ZNF484Q5JVG2 852 aa11.35□□□□□ -0.59
VIPAS39-201ENST00000327028 EXOC8Q8IYI6 725 aa11.35□□□□□ -0.59
VIPAS39-201ENST00000327028 KIFAP3Q92845 792 aa11.35□□□□□ -0.59
VIPAS39-201ENST00000327028 HPS3Q969F9 1004 aa11.35□□□□□ -0.59
VIPAS39-201ENST00000327028 RNPEPQ9H4A4 650 aa11.35□□□□□ -0.59
VIPAS39-201ENST00000327028 TUT1Q9H6E5 874 aaKnown RBP11.35□□□□□ -0.59
VIPAS39-201ENST00000327028 PCNTO95613 3336 aa11.34□□□□□ -0.59
VIPAS39-201ENST00000327028 MYADML2A6NDP7 307 aa11.34□□□□□ -0.59
VIPAS39-201ENST00000327028 GOLGA6L3A6NEY3 463 aa11.34□□□□□ -0.59
VIPAS39-201ENST00000327028 MSCO60682 206 aa11.34□□□□□ -0.59
VIPAS39-201ENST00000327028 MYL3P08590 195 aa11.34□□□□□ -0.59
VIPAS39-201ENST00000327028 C6orf222P0C671 652 aaPredicted RBP11.34□□□□□ -0.59
VIPAS39-201ENST00000327028 ADSSL1Q8N142 457 aa11.34□□□□□ -0.59
VIPAS39-201ENST00000327028 SLC7A3Q8WY07 619 aa11.34□□□□□ -0.59
VIPAS39-201ENST00000327028 KAT2BQ92831 832 aa11.34□□□□□ -0.59
VIPAS39-201ENST00000327028 CBX8Q9HC52 389 aa11.34□□□□□ -0.59
VIPAS39-201ENST00000327028 SLC39A2Q9NP94 309 aa11.34□□□□□ -0.59
VIPAS39-201ENST00000327028 GAS2O43903 313 aaKnown RBP11.34□□□□□ -0.59
VIPAS39-201ENST00000327028 ZEB2O60315 1214 aa11.34□□□□□ -0.59
VIPAS39-201ENST00000327028 MAFO75444 373 aaPredicted RBP11.34□□□□□ -0.59
VIPAS39-201ENST00000327028 CST5P28325 142 aaPredicted RBP11.34□□□□□ -0.59
VIPAS39-201ENST00000327028 ERCC5P28715 1186 aaPredicted RBP11.34□□□□□ -0.59
VIPAS39-201ENST00000327028 RTP1P59025 263 aa11.34□□□□□ -0.59
VIPAS39-201ENST00000327028 TBC1D8BQ0IIM8 1120 aa11.34□□□□□ -0.59
VIPAS39-201ENST00000327028 STIM1Q13586 685 aa11.34□□□□□ -0.59
VIPAS39-201ENST00000327028 FAM102BQ5T8I3 360 aa11.34□□□□□ -0.59
VIPAS39-201ENST00000327028 MYCT1Q8N699 235 aa11.34□□□□□ -0.59
VIPAS39-201ENST00000327028 HMX1Q9NP08 348 aaPredicted RBP11.34□□□□□ -0.59
VIPAS39-201ENST00000327028 HAS3O00219 553 aa11.33□□□□□ -0.6
VIPAS39-201ENST00000327028 PGK1P00558 417 aa11.33□□□□□ -0.6
VIPAS39-201ENST00000327028 PLS3P13797 630 aa11.33□□□□□ -0.6
VIPAS39-201ENST00000327028 INSRRP14616 1297 aa11.33□□□□□ -0.6
VIPAS39-201ENST00000327028 PRCPP42785 496 aa11.33□□□□□ -0.6
VIPAS39-201ENST00000327028 PSEN2P49810 448 aa11.33□□□□□ -0.6
VIPAS39-201ENST00000327028 PURAQ00577 322 aaKnown RBP11.33□□□□□ -0.6
VIPAS39-201ENST00000327028 MFSD10Q14728 455 aa11.33□□□□□ -0.6
VIPAS39-201ENST00000327028 MAEAQ7L5Y9 396 aa11.33□□□□□ -0.6
VIPAS39-201ENST00000327028 RNF214Q8ND24 703 aa11.33□□□□□ -0.6
VIPAS39-201ENST00000327028 JPH2Q9BR39 696 aaPredicted RBP11.33□□□□□ -0.6
VIPAS39-201ENST00000327028 KATNAL1Q9BW62 490 aa11.33□□□□□ -0.6
VIPAS39-201ENST00000327028 C17orf75Q9HAS0 396 aa11.33□□□□□ -0.6
VIPAS39-201ENST00000327028 GPRC5CQ9NQ84 441 aa11.33□□□□□ -0.6
VIPAS39-201ENST00000327028 LARSQ9P2J5 1176 aaKnown RBP11.33□□□□□ -0.6
VIPAS39-201ENST00000327028 SCN10AQ9Y5Y9 1956 aa11.33□□□□□ -0.6
VIPAS39-201ENST00000327028 IGKV6-21A0A0C4DH24 114 aa11.33□□□□□ -0.6
VIPAS39-201ENST00000327028 MAPTP10636 758 aaKnown RBP11.33□□□□□ -0.6
VIPAS39-201ENST00000327028 PPFIA1Q13136 1202 aa11.33□□□□□ -0.6
VIPAS39-201ENST00000327028 IQCB1Q15051 598 aa11.33□□□□□ -0.6
VIPAS39-201ENST00000327028 GNASQ5JWF2 1037 aa11.33□□□□□ -0.6
VIPAS39-201ENST00000327028 ODR4Q5SWX8 454 aa11.33□□□□□ -0.6
VIPAS39-201ENST00000327028 GUF1Q8N442 669 aaKnown RBP11.33□□□□□ -0.6
VIPAS39-201ENST00000327028 KLHDC9Q8NEP7 349 aa11.33□□□□□ -0.6
VIPAS39-201ENST00000327028 SH3TC2Q8TF17 1288 aa11.33□□□□□ -0.6
VIPAS39-201ENST00000327028 FIZ1Q96SL8 496 aa11.33□□□□□ -0.6
VIPAS39-201ENST00000327028 POLR3FQ9H1D9 316 aaPredicted RBP11.33□□□□□ -0.6
VIPAS39-201ENST00000327028 POLD4Q9HCU8 107 aa11.33□□□□□ -0.6
VIPAS39-201ENST00000327028 TBC1D7Q9P0N9 293 aa11.33□□□□□ -0.6
VIPAS39-201ENST00000327028 CTNND2Q9UQB3 1225 aa11.33□□□□□ -0.6
VIPAS39-201ENST00000327028 SFI1A8K8P3 1242 aa11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 PSMA7O14818 248 aa11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 IKBKBO14920 756 aa11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 C22orf31O95567 290 aa11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 PAK1Q13153 545 aa11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 KIAA0753Q2KHM9 967 aa11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 KLHL10Q6JEL2 608 aa11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 EPM2AIP1Q7L775 607 aaPredicted RBP11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 CTU1Q7Z7A3 348 aaKnown RBP11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 DHX40Q8IX18 779 aaKnown RBP11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 FAM178BQ8IXR5 827 aa11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 AOPEPQ8N6M6 819 aa11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 GLIS3Q8NEA6 775 aa11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 DHTKD1Q96HY7 919 aaPredicted RBP11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 MTG1Q9BT17 334 aaPredicted RBP11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 FGFBP2Q9BYJ0 223 aa11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 MRPL44Q9H9J2 332 aaKnown RBP11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 CEP350Q5VT06 3117 aa11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 UBE4BO95155 1302 aa11.32□□□□□ -0.6
VIPAS39-201ENST00000327028 EIF3DO15371 548 aaKnown RBP eCLIP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms