RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 TEPSINQ96N21 525 aa23.43■■□□□ 1.34
LIMS2-201ENST00000324938 DOCK1Q14185 1865 aa23.43■■□□□ 1.34
LIMS2-201ENST00000324938 MAPK7Q13164 816 aa23.42■■□□□ 1.34
LIMS2-201ENST00000324938 MIER3Q7Z3K6 550 aa23.42■■□□□ 1.34
LIMS2-201ENST00000324938 PACSIN1Q9BY11 444 aa23.42■■□□□ 1.34
LIMS2-201ENST00000324938 ZCCHC17Q9NP64 241 aaKnown RBP23.42■■□□□ 1.34
LIMS2-201ENST00000324938 GINM1Q9NU53 330 aa23.42■■□□□ 1.34
LIMS2-201ENST00000324938 DMAC2Q9NW81 257 aa23.42■■□□□ 1.34
LIMS2-201ENST00000324938 ATP8B3O60423 1300 aa23.42■■□□□ 1.34
LIMS2-201ENST00000324938 PALMO75781 387 aa23.42■■□□□ 1.34
LIMS2-201ENST00000324938 PPP1R37O75864 691 aa23.42■■□□□ 1.34
LIMS2-201ENST00000324938 COG2Q14746 738 aa23.42■■□□□ 1.34
LIMS2-201ENST00000324938 TNIP1Q15025 636 aa23.42■■□□□ 1.34
LIMS2-201ENST00000324938 CCDC181Q5TID7 509 aa23.42■■□□□ 1.34
LIMS2-201ENST00000324938 STRA6Q9BX79 667 aa23.42■■□□□ 1.34
LIMS2-201ENST00000324938 VIPAS39Q9H9C1 493 aa23.42■■□□□ 1.34
LIMS2-201ENST00000324938 AGPAT3Q9NRZ7 376 aa23.42■■□□□ 1.34
LIMS2-201ENST00000324938 PIM2Q9P1W9 311 aa23.42■■□□□ 1.34
LIMS2-201ENST00000324938 AJAP1Q9UKB5 411 aaPredicted RBP23.42■■□□□ 1.34
LIMS2-201ENST00000324938 UBIAD1Q9Y5Z9 338 aa23.42■■□□□ 1.34
LIMS2-201ENST00000324938 DDX39AO00148 427 aaKnown RBP23.41■■□□□ 1.34
LIMS2-201ENST00000324938 DHX15O43143 795 aaKnown RBP23.41■■□□□ 1.34
LIMS2-201ENST00000324938 HIP1RO75146 1068 aa23.41■■□□□ 1.34
LIMS2-201ENST00000324938 CXCR5P32302 372 aa23.41■■□□□ 1.34
LIMS2-201ENST00000324938 TNFAIP1Q13829 316 aa23.41■■□□□ 1.34
LIMS2-201ENST00000324938 PCNX4Q63HM2 1172 aa23.41■■□□□ 1.34
LIMS2-201ENST00000324938 KSR1Q8IVT5 923 aa23.41■■□□□ 1.34
LIMS2-201ENST00000324938 DAW1Q8N136 415 aa23.41■■□□□ 1.34
LIMS2-201ENST00000324938 GOLGA5Q8TBA6 731 aa23.41■■□□□ 1.34
LIMS2-201ENST00000324938 PSMB7Q99436 277 aa23.41■■□□□ 1.34
LIMS2-201ENST00000324938 ACBD3Q9H3P7 528 aa23.41■■□□□ 1.34
LIMS2-201ENST00000324938 SLC38A10Q9HBR0 1119 aa23.41■■□□□ 1.34
LIMS2-201ENST00000324938 MAP3K20Q9NYL2 800 aaKnown RBP23.41■■□□□ 1.34
LIMS2-201ENST00000324938 RNF14Q9UBS8 474 aa23.41■■□□□ 1.34
LIMS2-201ENST00000324938 LRRIQ3A6PVS8 624 aaPredicted RBP23.41■■□□□ 1.34
LIMS2-201ENST00000324938 P4HBP07237 508 aaKnown RBP23.41■■□□□ 1.34
LIMS2-201ENST00000324938 PAFAH1B1P43034 410 aa23.41■■□□□ 1.34
LIMS2-201ENST00000324938 ZNF280AP59817 542 aaPredicted RBP23.41■■□□□ 1.34
LIMS2-201ENST00000324938 TKFCQ3LXA3 575 aa23.41■■□□□ 1.34
LIMS2-201ENST00000324938 AGO4Q9HCK5 861 aaKnown RBP23.41■■□□□ 1.34
LIMS2-201ENST00000324938 NENFQ9UMX5 172 aa23.41■■□□□ 1.34
LIMS2-201ENST00000324938 SCAF8Q9UPN6 1271 aaKnown RBP23.41■■□□□ 1.34
LIMS2-201ENST00000324938 PADI6Q6TGC4 694 aa23.4■■□□□ 1.34
LIMS2-201ENST00000324938 SAMD3Q8N6K7 520 aa23.4■■□□□ 1.34
LIMS2-201ENST00000324938 JDP2Q8WYK2 163 aa23.4■■□□□ 1.34
LIMS2-201ENST00000324938 TAOK3Q9H2K8 898 aa23.4■■□□□ 1.34
LIMS2-201ENST00000324938 WDR81Q562E7 1941 aa23.4■■□□□ 1.34
LIMS2-201ENST00000324938 ALAS1P13196 640 aa23.39■■□□□ 1.34
LIMS2-201ENST00000324938 CYP2C19P33261 490 aa23.39■■□□□ 1.34
LIMS2-201ENST00000324938 BAG6P46379 1132 aa23.39■■□□□ 1.34
LIMS2-201ENST00000324938 FMO5P49326 533 aa23.39■■□□□ 1.34
LIMS2-201ENST00000324938 ITGB3BPQ13352 177 aaPredicted RBP23.39■■□□□ 1.34
LIMS2-201ENST00000324938 MEI1Q5TIA1 1274 aa23.39■■□□□ 1.34
LIMS2-201ENST00000324938 CCNI2Q6ZMN8 369 aaPredicted RBP23.39■■□□□ 1.34
LIMS2-201ENST00000324938 SLC9A9Q8IVB4 645 aa23.39■■□□□ 1.34
LIMS2-201ENST00000324938 SYTL5Q8TDW5 730 aaPredicted RBP23.39■■□□□ 1.34
LIMS2-201ENST00000324938 PKD2L1Q9P0L9 805 aa23.39■■□□□ 1.34
LIMS2-201ENST00000324938 NAGPAQ9UK23 515 aa23.39■■□□□ 1.34
LIMS2-201ENST00000324938 DBR1Q9UK59 544 aaKnown RBP23.39■■□□□ 1.34
LIMS2-201ENST00000324938 FRMD4BQ9Y2L6 1034 aa23.39■■□□□ 1.34
LIMS2-201ENST00000324938 MRPS9P82933 396 aaKnown RBP23.39■■□□□ 1.33
LIMS2-201ENST00000324938 PPP2R5AQ15172 486 aa23.39■■□□□ 1.33
LIMS2-201ENST00000324938 CPXCR1Q8N123 301 aa23.39■■□□□ 1.33
LIMS2-201ENST00000324938 RAVER2Q9HCJ3 691 aaKnown RBP23.39■■□□□ 1.33
LIMS2-201ENST00000324938 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.39■■□□□ 1.33
LIMS2-201ENST00000324938 CTNND1O60716 968 aaKnown RBP23.38■■□□□ 1.33
LIMS2-201ENST00000324938 ZMYND10O75800 440 aa23.38■■□□□ 1.33
LIMS2-201ENST00000324938 FLOT1O75955 427 aa23.38■■□□□ 1.33
LIMS2-201ENST00000324938 MUM1L1Q5H9M0 696 aa23.38■■□□□ 1.33
LIMS2-201ENST00000324938 EHD2Q9NZN4 543 aa23.38■■□□□ 1.33
LIMS2-201ENST00000324938 ZHX1Q9UKY1 873 aaPredicted RBP23.38■■□□□ 1.33
LIMS2-201ENST00000324938 ZHX2Q9Y6X8 837 aa23.38■■□□□ 1.33
LIMS2-201ENST00000324938 GRID2IPA4D2P6 1211 aa23.38■■□□□ 1.33
LIMS2-201ENST00000324938 MAPTP10636 758 aaKnown RBP23.38■■□□□ 1.33
LIMS2-201ENST00000324938 FERP16591 822 aa23.38■■□□□ 1.33
LIMS2-201ENST00000324938 CYP2J2P51589 502 aa23.38■■□□□ 1.33
LIMS2-201ENST00000324938 TGFB2P61812 414 aa23.38■■□□□ 1.33
LIMS2-201ENST00000324938 MYBPC2Q14324 1141 aa23.38■■□□□ 1.33
LIMS2-201ENST00000324938 CFAP221Q4G0U5 840 aa23.38■■□□□ 1.33
LIMS2-201ENST00000324938 GJB7Q6PEY0 223 aa23.38■■□□□ 1.33
LIMS2-201ENST00000324938 LRRC1Q9BTT6 524 aa23.38■■□□□ 1.33
LIMS2-201ENST00000324938 SMARCAL1Q9NZC9 954 aa23.38■■□□□ 1.33
LIMS2-201ENST00000324938 PPP1R9AQ9ULJ8 1098 aa23.38■■□□□ 1.33
LIMS2-201ENST00000324938 COL11A1P12107 1806 aaPredicted RBP23.37■■□□□ 1.33
LIMS2-201ENST00000324938 LYPLA2O95372 231 aa23.37■■□□□ 1.33
LIMS2-201ENST00000324938 FTCDO95954 541 aa23.37■■□□□ 1.33
LIMS2-201ENST00000324938 EGFRP00533 1210 aa23.37■■□□□ 1.33
LIMS2-201ENST00000324938 MYBL2P10244 700 aa23.37■■□□□ 1.33
LIMS2-201ENST00000324938 ALCAMQ13740 583 aa23.37■■□□□ 1.33
LIMS2-201ENST00000324938 ALKBH5Q6P6C2 394 aaKnown RBP23.37■■□□□ 1.33
LIMS2-201ENST00000324938 VPS36Q86VN1 386 aa23.37■■□□□ 1.33
LIMS2-201ENST00000324938 K7ENM7 598 aa23.36■■□□□ 1.33
LIMS2-201ENST00000324938 RPS12P25398 132 aaKnown RBP23.36■■□□□ 1.33
LIMS2-201ENST00000324938 TNNT3P45378 269 aaPredicted RBP23.36■■□□□ 1.33
LIMS2-201ENST00000324938 DGKZQ13574 1117 aa23.36■■□□□ 1.33
LIMS2-201ENST00000324938 MTMR1Q13613 665 aa23.36■■□□□ 1.33
LIMS2-201ENST00000324938 DEFB132Q7Z7B7 95 aa23.36■■□□□ 1.33
LIMS2-201ENST00000324938 LARSQ9P2J5 1176 aaKnown RBP23.36■■□□□ 1.33
LIMS2-201ENST00000324938 PNMA2Q9UL42 364 aa23.36■■□□□ 1.33
LIMS2-201ENST00000324938 VCAM1P19320 739 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms