RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 SPTY2D1Q68D10 685 aaPredicted RBP19.4■□□□□ 0.7
PRKCB-202ENST00000321728 PTF1AQ7RTS3 328 aa19.4■□□□□ 0.7
PRKCB-202ENST00000321728 RNF25Q96BH1 459 aaPredicted RBP19.4■□□□□ 0.7
PRKCB-202ENST00000321728 ZDHHC18Q9NUE0 388 aa19.4■□□□□ 0.7
PRKCB-202ENST00000321728 PCDHA12Q9UN75 941 aa19.4■□□□□ 0.7
PRKCB-202ENST00000321728 AGAP1Q9UPQ3 857 aa19.4■□□□□ 0.7
PRKCB-202ENST00000321728 A0A0A6YYK5 440 aaPredicted RBP19.4■□□□□ 0.7
PRKCB-202ENST00000321728 GOLGA6L10A0A0M3HER8 536 aa19.4■□□□□ 0.7
PRKCB-202ENST00000321728 DDX3XO00571 662 aaKnown RBP eCLIP19.4■□□□□ 0.73e-20■■■■□ 20.3
PRKCB-202ENST00000321728 XRCC5P13010 732 aaKnown RBP19.4■□□□□ 0.7
PRKCB-202ENST00000321728 PRKCIP41743 596 aa19.4■□□□□ 0.7
PRKCB-202ENST00000321728 SLCO1A2P46721 670 aa19.4■□□□□ 0.7
PRKCB-202ENST00000321728 GALCP54803 685 aa19.4■□□□□ 0.7
PRKCB-202ENST00000321728 RIPK1Q13546 671 aa19.4■□□□□ 0.7
PRKCB-202ENST00000321728 DUPD1Q68J44 220 aa19.4■□□□□ 0.7
PRKCB-202ENST00000321728 TBC1D22AQ8WUA7 517 aa19.4■□□□□ 0.7
PRKCB-202ENST00000321728 NSRP1Q9H0G5 558 aaKnown RBP19.4■□□□□ 0.7
PRKCB-202ENST00000321728 PPP1R12AO14974 1030 aaPredicted RBP19.39■□□□□ 0.7
PRKCB-202ENST00000321728 SF3B3Q15393 1217 aaKnown RBP19.39■□□□□ 0.7
PRKCB-202ENST00000321728 UBE2SQ16763 222 aa19.39■□□□□ 0.7
PRKCB-202ENST00000321728 DPY19L2P1Q6NXN4 242 aa19.39■□□□□ 0.7
PRKCB-202ENST00000321728 GJB7Q6PEY0 223 aa19.39■□□□□ 0.7
PRKCB-202ENST00000321728 MAB21L3Q8N8X9 362 aa19.39■□□□□ 0.7
PRKCB-202ENST00000321728 AGAP11Q8TF27 550 aa19.39■□□□□ 0.7
PRKCB-202ENST00000321728 NT5C3AQ9H0P0 336 aa19.39■□□□□ 0.7
PRKCB-202ENST00000321728 PPP1R9AQ9ULJ8 1098 aa19.39■□□□□ 0.7
PRKCB-202ENST00000321728 KRT13P13646 458 aa19.39■□□□□ 0.69
PRKCB-202ENST00000321728 KCNJ2P63252 427 aa19.39■□□□□ 0.69
PRKCB-202ENST00000321728 ZNF211Q13398 564 aaPredicted RBP19.39■□□□□ 0.69
PRKCB-202ENST00000321728 EDRF1Q3B7T1 1238 aa19.39■□□□□ 0.69
PRKCB-202ENST00000321728 NAIF1Q69YI7 327 aaPredicted RBP19.39■□□□□ 0.69
PRKCB-202ENST00000321728 FBXO25Q8TCJ0 367 aa19.39■□□□□ 0.69
PRKCB-202ENST00000321728 CCHCR1Q8TD31 782 aa19.39■□□□□ 0.69
PRKCB-202ENST00000321728 HAS1Q92839 578 aa19.39■□□□□ 0.69
PRKCB-202ENST00000321728 ZNF287Q9HBT7 754 aa19.39■□□□□ 0.69
PRKCB-202ENST00000321728 AJAP1Q9UKB5 411 aaPredicted RBP19.39■□□□□ 0.69
PRKCB-202ENST00000321728 TRPC6Q9Y210 931 aa19.39■□□□□ 0.69
PRKCB-202ENST00000321728 ROBO3Q96MS0 1386 aa19.39■□□□□ 0.69
PRKCB-202ENST00000321728 GFPT2O94808 682 aa19.38■□□□□ 0.69
PRKCB-202ENST00000321728 UBOX5O94941 541 aa19.38■□□□□ 0.69
PRKCB-202ENST00000321728 LDHBP07195 334 aaKnown RBP19.38■□□□□ 0.69
PRKCB-202ENST00000321728 ABCB4P21439 1286 aa19.38■□□□□ 0.69
PRKCB-202ENST00000321728 PPP4R3CPQ6ZMV5 832 aa19.38■□□□□ 0.69
PRKCB-202ENST00000321728 LINC00116Q8NCU8 138 aa19.38■□□□□ 0.69
PRKCB-202ENST00000321728 SLC35G2Q8TBE7 412 aa19.38■□□□□ 0.69
PRKCB-202ENST00000321728 ERVK-5Q9HDB9 667 aa19.38■□□□□ 0.69
PRKCB-202ENST00000321728 AFF2P51816 1311 aa19.38■□□□□ 0.69
PRKCB-202ENST00000321728 POTEB3A0JP26 581 aa19.38■□□□□ 0.69
PRKCB-202ENST00000321728 POTECB2RU33 542 aa19.38■□□□□ 0.69
PRKCB-202ENST00000321728 NPEPPSP55786 919 aa19.38■□□□□ 0.69
PRKCB-202ENST00000321728 RPS8P62241 208 aaKnown RBP19.38■□□□□ 0.69
PRKCB-202ENST00000321728 KLRC3Q07444 240 aa19.38■□□□□ 0.69
PRKCB-202ENST00000321728 KIAA1755Q5JYT7 1200 aa19.38■□□□□ 0.69
PRKCB-202ENST00000321728 C6orf118Q5T5N4 469 aa19.38■□□□□ 0.69
PRKCB-202ENST00000321728 DCAF12L1Q5VU92 463 aa19.38■□□□□ 0.69
PRKCB-202ENST00000321728 POTEBQ6S5H4 581 aa19.38■□□□□ 0.69
PRKCB-202ENST00000321728 FRMD5Q7Z6J6 570 aa19.38■□□□□ 0.69
PRKCB-202ENST00000321728 CEP95Q96GE4 821 aa19.38■□□□□ 0.69
PRKCB-202ENST00000321728 ZNF652Q9Y2D9 606 aa19.38■□□□□ 0.69
PRKCB-202ENST00000321728 BAG3O95817 575 aa19.38■□□□□ 0.69
PRKCB-202ENST00000321728 CDK8P49336 464 aa19.38■□□□□ 0.69
PRKCB-202ENST00000321728 CASP5P51878 434 aa19.38■□□□□ 0.69
PRKCB-202ENST00000321728 JAMLQ86YT9 394 aa19.38■□□□□ 0.69
PRKCB-202ENST00000321728 EPS8L3Q8TE67 593 aaKnown RBP19.38■□□□□ 0.69
PRKCB-202ENST00000321728 DYDC1Q8WWB3 177 aa19.38■□□□□ 0.69
PRKCB-202ENST00000321728 NAP1L3Q99457 506 aaPredicted RBP19.38■□□□□ 0.69
PRKCB-202ENST00000321728 NOP53Q9NZM5 478 aaKnown RBP19.38■□□□□ 0.69
PRKCB-202ENST00000321728 TTC7AQ9ULT0 858 aaPredicted RBP19.38■□□□□ 0.69
PRKCB-202ENST00000321728 KDM3AQ9Y4C1 1321 aa19.37■□□□□ 0.69
PRKCB-202ENST00000321728 AGTP01019 485 aa19.37■□□□□ 0.69
PRKCB-202ENST00000321728 NQO1P15559 274 aaKnown RBP19.37■□□□□ 0.69
PRKCB-202ENST00000321728 ZNF268Q14587 947 aaPredicted RBP19.37■□□□□ 0.69
PRKCB-202ENST00000321728 SPDL1Q96EA4 605 aa19.37■□□□□ 0.69
PRKCB-202ENST00000321728 SEMA4AQ9H3S1 761 aa19.37■□□□□ 0.69
PRKCB-202ENST00000321728 ECT2Q9H8V3 914 aa19.37■□□□□ 0.69
PRKCB-202ENST00000321728 BATF3Q9NR55 127 aa19.37■□□□□ 0.69
PRKCB-202ENST00000321728 GCNT4Q9P109 453 aa19.37■□□□□ 0.69
PRKCB-202ENST00000321728 INTUQ9ULD6 942 aa19.37■□□□□ 0.69
PRKCB-202ENST00000321728 NENFQ9UMX5 172 aa19.37■□□□□ 0.69
PRKCB-202ENST00000321728 CYP11B2P19099 503 aa19.37■□□□□ 0.69
PRKCB-202ENST00000321728 ANXA13P27216 316 aa19.37■□□□□ 0.69
PRKCB-202ENST00000321728 EIF6P56537 245 aaKnown RBP19.37■□□□□ 0.69
PRKCB-202ENST00000321728 ADCY2Q08462 1091 aa19.37■□□□□ 0.69
PRKCB-202ENST00000321728 PPP2R5EQ16537 467 aa19.37■□□□□ 0.69
PRKCB-202ENST00000321728 CCDC38Q502W7 563 aa19.37■□□□□ 0.69
PRKCB-202ENST00000321728 CLEC10AQ8IUN9 316 aa19.37■□□□□ 0.69
PRKCB-202ENST00000321728 GLYCTKQ8IVS8 523 aa19.37■□□□□ 0.69
PRKCB-202ENST00000321728 ZC3H3Q8IXZ2 948 aaKnown RBP19.37■□□□□ 0.69
PRKCB-202ENST00000321728 RASAL2Q9UJF2 1139 aa19.37■□□□□ 0.69
PRKCB-202ENST00000321728 ATAD5Q96QE3 1844 aa19.36■□□□□ 0.69
PRKCB-202ENST00000321728 DIAPH2O60879 1101 aa19.36■□□□□ 0.69
PRKCB-202ENST00000321728 GCKP35557 465 aa19.36■□□□□ 0.69
PRKCB-202ENST00000321728 ALDH5A1P51649 535 aaPredicted RBP19.36■□□□□ 0.69
PRKCB-202ENST00000321728 EPHA7Q15375 998 aa19.36■□□□□ 0.69
PRKCB-202ENST00000321728 UBAP2Q5T6F2 1119 aaKnown RBP19.36■□□□□ 0.69
PRKCB-202ENST00000321728 BZW1Q7L1Q6 419 aaKnown RBP19.36■□□□□ 0.69
PRKCB-202ENST00000321728 KIAA0391O15091 583 aaKnown RBP19.36■□□□□ 0.69
PRKCB-202ENST00000321728 DDX3YO15523 660 aaKnown RBP19.36■□□□□ 0.69
PRKCB-202ENST00000321728 SMARCA1P28370 1054 aa19.36■□□□□ 0.69
PRKCB-202ENST00000321728 CDC25CP30307 473 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms