RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 AP1B1Q10567 949 aa9.49□□□□□ -0.89
SSBP2-201ENST00000320672 BEND6Q5SZJ8 279 aaPredicted RBP9.49□□□□□ -0.89
SSBP2-201ENST00000320672 FAM136AQ96C01 138 aa9.49□□□□□ -0.89
SSBP2-201ENST00000320672 V9GYQ6 96 aa9.49□□□□□ -0.89
SSBP2-201ENST00000320672 MCF2LO15068 1137 aa9.49□□□□□ -0.89
SSBP2-201ENST00000320672 ZBED1O96006 694 aa9.49□□□□□ -0.89
SSBP2-201ENST00000320672 GARSP41250 739 aaKnown RBP9.49□□□□□ -0.89
SSBP2-201ENST00000320672 TAF11Q15544 211 aa9.49□□□□□ -0.89
SSBP2-201ENST00000320672 PPM1NQ8N819 430 aa9.49□□□□□ -0.89
SSBP2-201ENST00000320672 STRBPQ96SI9 672 aaKnown RBP9.49□□□□□ -0.89
SSBP2-201ENST00000320672 CAPN10Q9HC96 672 aa9.49□□□□□ -0.89
SSBP2-201ENST00000320672 CFAP69A5D8W1 941 aa9.49□□□□□ -0.89
SSBP2-201ENST00000320672 TUBB4AP04350 444 aa9.49□□□□□ -0.89
SSBP2-201ENST00000320672 SLFN14P0C7P3 912 aa9.49□□□□□ -0.89
SSBP2-201ENST00000320672 KRT3P12035 628 aa9.49□□□□□ -0.89
SSBP2-201ENST00000320672 ARHGAP25P42331 645 aa9.49□□□□□ -0.89
SSBP2-201ENST00000320672 INPP1P49441 399 aa9.49□□□□□ -0.89
SSBP2-201ENST00000320672 TWF2Q6IBS0 349 aaKnown RBP9.49□□□□□ -0.89
SSBP2-201ENST00000320672 PYROXD1Q8WU10 500 aa9.49□□□□□ -0.89
SSBP2-201ENST00000320672 TMEM143Q96AN5 459 aa9.49□□□□□ -0.89
SSBP2-201ENST00000320672 RMDN3Q96TC7 470 aa9.49□□□□□ -0.89
SSBP2-201ENST00000320672 ZNF521Q96K83 1311 aa9.48□□□□□ -0.89
SSBP2-201ENST00000320672 YWHAEP62258 255 aaKnown RBP9.48□□□□□ -0.89
SSBP2-201ENST00000320672 RGS9BPQ6ZS82 235 aa9.48□□□□□ -0.89
SSBP2-201ENST00000320672 RNF139Q8WU17 664 aa9.48□□□□□ -0.89
SSBP2-201ENST00000320672 PARVGQ9HBI0 331 aa9.48□□□□□ -0.89
SSBP2-201ENST00000320672 PPP1R9AQ9ULJ8 1098 aa9.48□□□□□ -0.89
SSBP2-201ENST00000320672 MINPP1Q9UNW1 487 aa9.48□□□□□ -0.89
SSBP2-201ENST00000320672 PPP6R2O75170 966 aa9.48□□□□□ -0.89
SSBP2-201ENST00000320672 TFDP1Q14186 410 aa9.48□□□□□ -0.89
SSBP2-201ENST00000320672 CASP8Q14790 479 aa9.48□□□□□ -0.89
SSBP2-201ENST00000320672 ARHGEF1Q92888 912 aaKnown RBP9.48□□□□□ -0.89
SSBP2-201ENST00000320672 PPARGC1AQ9UBK2 798 aaKnown RBP9.48□□□□□ -0.89
SSBP2-201ENST00000320672 DENND3A2RUS2 1198 aa9.48□□□□□ -0.89
SSBP2-201ENST00000320672 SERPIND1P05546 499 aa9.48□□□□□ -0.89
SSBP2-201ENST00000320672 PDGFRBP09619 1106 aa9.48□□□□□ -0.89
SSBP2-201ENST00000320672 ACOT2P49753 483 aa9.48□□□□□ -0.89
SSBP2-201ENST00000320672 TMTC3Q6ZXV5 915 aa9.48□□□□□ -0.89
SSBP2-201ENST00000320672 TRMT2AQ8IZ69 625 aaKnown RBP9.48□□□□□ -0.89
SSBP2-201ENST00000320672 TDRD7Q8NHU6 1098 aaKnown RBP9.48□□□□□ -0.89
SSBP2-201ENST00000320672 CPA5Q8WXQ8 436 aa9.48□□□□□ -0.89
SSBP2-201ENST00000320672 GGCXP38435 758 aa9.48□□□□□ -0.89
SSBP2-201ENST00000320672 MTMR1Q13613 665 aa9.48□□□□□ -0.89
SSBP2-201ENST00000320672 CAPRIN1Q14444 709 aaKnown RBP9.48□□□□□ -0.89
SSBP2-201ENST00000320672 NECTIN1Q15223 517 aa9.48□□□□□ -0.89
SSBP2-201ENST00000320672 AMHR2Q16671 573 aa9.48□□□□□ -0.89
SSBP2-201ENST00000320672 SH2D3CQ8N5H7 860 aa9.48□□□□□ -0.89
SSBP2-201ENST00000320672 FOXP1Q9H334 677 aaPredicted RBP9.48□□□□□ -0.89
SSBP2-201ENST00000320672 UGGT1Q9NYU2 1555 aa9.48□□□□□ -0.89
SSBP2-201ENST00000320672 NLGN1Q8N2Q7 840 aa9.48□□□□□ -0.89
SSBP2-201ENST00000320672 MAIP1Q8WWC4 291 aa9.48□□□□□ -0.89
SSBP2-201ENST00000320672 NCLNQ969V3 563 aa9.48□□□□□ -0.89
SSBP2-201ENST00000320672 RGS12O14924 1447 aa9.48□□□□□ -0.89
SSBP2-201ENST00000320672 HOXB7P09629 217 aa9.48□□□□□ -0.89
SSBP2-201ENST00000320672 RARBP10826 455 aa9.48□□□□□ -0.89
SSBP2-201ENST00000320672 NPR1P16066 1061 aa9.48□□□□□ -0.89
SSBP2-201ENST00000320672 POLR2BP30876 1174 aaKnown RBP9.48□□□□□ -0.89
SSBP2-201ENST00000320672 CCDC90BQ9GZT6 254 aa9.48□□□□□ -0.89
SSBP2-201ENST00000320672 ATP1A1P05023 1023 aaKnown RBP9.47□□□□□ -0.89
SSBP2-201ENST00000320672 IL9RQ01113 521 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 ART3Q13508 389 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 ARHGAP24Q8N264 748 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 UNKQ9C0B0 810 aaKnown RBP9.47□□□□□ -0.89
SSBP2-201ENST00000320672 RAPGEF6Q8TEU7 1601 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 ZNF568Q3ZCX4 644 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 CEP128Q6ZU80 1094 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 CDKL2Q92772 493 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 VCXQ9H320 206 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 PLEKHG3A1L390 1219 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 RASGRF2O14827 1237 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 CCDC85BQ15834 202 aaPredicted RBP9.47□□□□□ -0.89
SSBP2-201ENST00000320672 RSBN1LQ6PCB5 846 aaPredicted RBP9.47□□□□□ -0.89
SSBP2-201ENST00000320672 VSTM4Q8IW00 320 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 LRRC71Q8N4P6 559 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 CCDC138Q96M89 665 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 NACC1Q96RE7 527 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 LMCD1Q9NZU5 365 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 PGRMC1O00264 195 aaKnown RBP9.47□□□□□ -0.89
SSBP2-201ENST00000320672 DFFAO00273 331 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 PMLP29590 882 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 NOP14P78316 857 aaKnown RBP9.47□□□□□ -0.89
SSBP2-201ENST00000320672 MRFAP1L1Q96HT8 127 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 PI4K2AQ9BTU6 479 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 KLHL8Q9P2G9 620 aaPredicted RBP9.47□□□□□ -0.89
SSBP2-201ENST00000320672 MARCOQ9UEW3 520 aaPredicted RBP9.47□□□□□ -0.89
SSBP2-201ENST00000320672 CCNE1P24864 410 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 ELF1P32519 619 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 PLA2G4FQ68DD2 849 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 USP49Q70CQ1 688 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 ADGRF4Q8IZF3 695 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 ATP6V0A1Q93050 837 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 YIPF3Q9GZM5 350 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 GLT8D2Q9H1C3 349 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 TSPYL2Q9H2G4 693 aaPredicted RBP9.47□□□□□ -0.89
SSBP2-201ENST00000320672 TRPC7Q9HCX4 862 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 CYP26A1O43174 497 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 DAB2P98082 770 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 ASPRV1Q53RT3 343 aa9.47□□□□□ -0.89
SSBP2-201ENST00000320672 DALRD3Q5D0E6 543 aaKnown RBP9.47□□□□□ -0.89
SSBP2-201ENST00000320672 ENAHQ8N8S7 591 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms