RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 SYCP3Q8IZU3 236 aa8.3□□□□□ -1.08
IFT88-201ENST00000319980 CCDC43Q96MW1 224 aaKnown RBP8.3□□□□□ -1.08
IFT88-201ENST00000319980 PARD6BQ9BYG5 372 aa8.3□□□□□ -1.08
IFT88-201ENST00000319980 TSGA10Q9BZW7 698 aa8.3□□□□□ -1.08
IFT88-201ENST00000319980 GBP3Q9H0R5 595 aa8.3□□□□□ -1.08
IFT88-201ENST00000319980 LARSQ9P2J5 1176 aaKnown RBP8.3□□□□□ -1.08
IFT88-201ENST00000319980 DDX41Q9UJV9 622 aaKnown RBP8.3□□□□□ -1.08
IFT88-201ENST00000319980 PNMA2Q9UL42 364 aa8.3□□□□□ -1.08
IFT88-201ENST00000319980 ZMYM2Q9UBW7 1377 aa8.3□□□□□ -1.08
IFT88-201ENST00000319980 SSU72P8A0A1W2PR75 194 aa8.3□□□□□ -1.08
IFT88-201ENST00000319980 CTAGE15A4D2H0 777 aa8.3□□□□□ -1.08
IFT88-201ENST00000319980 C19orf81C9J6K1 198 aa8.3□□□□□ -1.08
IFT88-201ENST00000319980 SLC16A3O15427 465 aaKnown RBP8.3□□□□□ -1.08
IFT88-201ENST00000319980 LCA5LO95447 670 aa8.3□□□□□ -1.08
IFT88-201ENST00000319980 SERPING1P05155 500 aa8.3□□□□□ -1.08
IFT88-201ENST00000319980 CTAGE8P0CG41 777 aa8.3□□□□□ -1.08
IFT88-201ENST00000319980 UCHL3P15374 230 aa8.3□□□□□ -1.08
IFT88-201ENST00000319980 PON1P27169 355 aa8.3□□□□□ -1.08
IFT88-201ENST00000319980 DSG3P32926 999 aa8.3□□□□□ -1.08
IFT88-201ENST00000319980 PSMC2P35998 433 aaKnown RBP8.3□□□□□ -1.08
IFT88-201ENST00000319980 CYP2J2P51589 502 aa8.3□□□□□ -1.08
IFT88-201ENST00000319980 MAPK7Q13164 816 aa8.3□□□□□ -1.08
IFT88-201ENST00000319980 WHAMMP3Q1A5X7 153 aa8.3□□□□□ -1.08
IFT88-201ENST00000319980 CTAGE6Q86UF2 777 aa8.3□□□□□ -1.08
IFT88-201ENST00000319980 CTAGE4Q8IX94 777 aa8.3□□□□□ -1.08
IFT88-201ENST00000319980 FAM186BQ8IYM0 893 aa8.3□□□□□ -1.08
IFT88-201ENST00000319980 GPC2Q8N158 579 aa8.3□□□□□ -1.08
IFT88-201ENST00000319980 SAMD3Q8N6K7 520 aa8.3□□□□□ -1.08
IFT88-201ENST00000319980 RDH13Q8NBN7 331 aa8.3□□□□□ -1.08
IFT88-201ENST00000319980 SYN2Q92777 582 aaPredicted RBP8.3□□□□□ -1.08
IFT88-201ENST00000319980 SPAG5Q96R06 1193 aa8.3□□□□□ -1.08
IFT88-201ENST00000319980 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.3□□□□□ -1.08
IFT88-201ENST00000319980 ADAMTS1Q9UHI8 967 aa8.3□□□□□ -1.08
IFT88-201ENST00000319980 ZNF214Q9UL59 606 aaPredicted RBP8.3□□□□□ -1.08
IFT88-201ENST00000319980 SAR1BQ9Y6B6 198 aa8.3□□□□□ -1.08
IFT88-201ENST00000319980 K7ENM7 598 aa8.29□□□□□ -1.08
IFT88-201ENST00000319980 PPP1R12BO60237 982 aaPredicted RBP8.29□□□□□ -1.08
IFT88-201ENST00000319980 CCNE2O96020 404 aa8.29□□□□□ -1.08
IFT88-201ENST00000319980 NR3C2P08235 984 aa8.29□□□□□ -1.08
IFT88-201ENST00000319980 KLHL30Q0D2K2 578 aa8.29□□□□□ -1.08
IFT88-201ENST00000319980 TMEM132BQ14DG7 1078 aa8.29□□□□□ -1.08
IFT88-201ENST00000319980 UGCGQ16739 394 aa8.29□□□□□ -1.08
IFT88-201ENST00000319980 TMCO4Q5TGY1 634 aa8.29□□□□□ -1.08
IFT88-201ENST00000319980 TMCO3Q6UWJ1 677 aa8.29□□□□□ -1.08
IFT88-201ENST00000319980 TRAPPC11Q7Z392 1133 aa8.29□□□□□ -1.08
IFT88-201ENST00000319980 PLCD3Q8N3E9 789 aa8.29□□□□□ -1.08
IFT88-201ENST00000319980 DRC1Q96MC2 740 aa8.29□□□□□ -1.08
IFT88-201ENST00000319980 GANQ9H2C0 597 aa8.29□□□□□ -1.08
IFT88-201ENST00000319980 MLXIPQ9HAP2 919 aa8.29□□□□□ -1.08
IFT88-201ENST00000319980 AGPAT3Q9NRZ7 376 aa8.29□□□□□ -1.08
IFT88-201ENST00000319980 TMOD4Q9NZQ9 345 aa8.29□□□□□ -1.08
IFT88-201ENST00000319980 CAPN6Q9Y6Q1 641 aa8.29□□□□□ -1.08
IFT88-201ENST00000319980 MOCS3O95396 460 aa8.29□□□□□ -1.08
IFT88-201ENST00000319980 C1QTNF8P60827 252 aa8.29□□□□□ -1.08
IFT88-201ENST00000319980 SUPT20HL1Q3ZLR7 823 aa8.29□□□□□ -1.08
IFT88-201ENST00000319980 KLHDC7AQ5VTJ3 777 aa8.29□□□□□ -1.08
IFT88-201ENST00000319980 GBP6Q6ZN66 633 aa8.29□□□□□ -1.08
IFT88-201ENST00000319980 VSIG10LQ86VR7 867 aa8.29□□□□□ -1.08
IFT88-201ENST00000319980 REPS2Q8NFH8 660 aa8.29□□□□□ -1.08
IFT88-201ENST00000319980 TRIM58Q8NG06 486 aa8.29□□□□□ -1.08
IFT88-201ENST00000319980 BORCS6Q96GS4 357 aa8.29□□□□□ -1.08
IFT88-201ENST00000319980 CAPZA3Q96KX2 299 aa8.29□□□□□ -1.08
IFT88-201ENST00000319980 AIPL1Q9NZN9 384 aa8.29□□□□□ -1.08
IFT88-201ENST00000319980 OGFRQ9NZT2 677 aa8.29□□□□□ -1.08
IFT88-201ENST00000319980 GCNT4Q9P109 453 aa8.29□□□□□ -1.08
IFT88-201ENST00000319980 FRMD4BQ9Y2L6 1034 aa8.29□□□□□ -1.08
IFT88-201ENST00000319980 FHOD1Q9Y613 1164 aa8.29□□□□□ -1.08
IFT88-201ENST00000319980 WDR64B1ANS9 1081 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 SEC31AO94979 1220 aaKnown RBP8.28□□□□□ -1.08
IFT88-201ENST00000319980 RHOXF2BP0C7M4 288 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 LMNB1P20700 586 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 NAP1L1P55209 391 aaKnown RBP8.28□□□□□ -1.08
IFT88-201ENST00000319980 NPEPPSP55786 919 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 SP4Q02446 784 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 PAPD7Q5XG87 772 aaKnown RBP8.28□□□□□ -1.08
IFT88-201ENST00000319980 CATSPERGQ6ZRH7 1159 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 NLRX1Q86UT6 975 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 C12orf42Q96LP6 360 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 RHOXF2Q9BQY4 288 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 TEX13BQ9BXU2 312 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 PLCB1Q9NQ66 1216 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 GPRC5CQ9NQ84 441 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 SALL4Q9UJQ4 1053 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 DBR1Q9UK59 544 aaKnown RBP8.28□□□□□ -1.08
IFT88-201ENST00000319980 A0A087X0T9 212 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 BACH1O14867 736 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 BUB1O43683 1085 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 EXOC3O60645 756 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 TACC1O75410 805 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 DDNO94850 711 aaPredicted RBP8.28□□□□□ -1.08
IFT88-201ENST00000319980 FAM228BP0C875 321 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 CCND2P30279 289 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 PSMC5P62195 406 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 KRT76Q01546 638 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 ASIC2Q16515 512 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 XKR9Q5GH70 373 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 PLA2G4FQ68DD2 849 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 DPY19L2P1Q6NXN4 242 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 GJB7Q6PEY0 223 aa8.28□□□□□ -1.08
IFT88-201ENST00000319980 C4orf19Q8IY42 314 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms