RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 AEBP2Q6ZN18 517 aaPredicted RBP17.71■□□□□ 0.43
CACFD1-202ENST00000316948 GPBP1Q86WP2 473 aa17.71■□□□□ 0.43
CACFD1-202ENST00000316948 RASGEF1CQ8N431 466 aa17.71■□□□□ 0.43
CACFD1-202ENST00000316948 TRIM6Q9C030 488 aaPredicted RBP17.71■□□□□ 0.43
CACFD1-202ENST00000316948 KCTD10Q9H3F6 313 aa17.71■□□□□ 0.43
CACFD1-202ENST00000316948 INTS9Q9NV88 658 aaKnown RBP17.71■□□□□ 0.43
CACFD1-202ENST00000316948 SUCLA2Q9P2R7 463 aaPredicted RBP17.71■□□□□ 0.43
CACFD1-202ENST00000316948 AJAP1Q9UKB5 411 aaPredicted RBP17.71■□□□□ 0.43
CACFD1-202ENST00000316948 SNX24Q9Y343 169 aa17.71■□□□□ 0.43
CACFD1-202ENST00000316948 CD2APQ9Y5K6 639 aa17.71■□□□□ 0.43
CACFD1-202ENST00000316948 RPS6KA4O75676 772 aa17.7■□□□□ 0.42
CACFD1-202ENST00000316948 ZNF211Q13398 564 aaPredicted RBP17.7■□□□□ 0.42
CACFD1-202ENST00000316948 GRAPQ13588 217 aa17.7■□□□□ 0.42
CACFD1-202ENST00000316948 TAX1BP1Q86VP1 789 aa17.7■□□□□ 0.42
CACFD1-202ENST00000316948 GRAPLQ8TC17 118 aaPredicted RBP17.7■□□□□ 0.42
CACFD1-202ENST00000316948 AMFRQ9UKV5 643 aa17.7■□□□□ 0.42
CACFD1-202ENST00000316948 STXBP5LQ9Y2K9 1186 aa17.7■□□□□ 0.42
CACFD1-202ENST00000316948 UTRNP46939 3433 aa17.7■□□□□ 0.42
CACFD1-202ENST00000316948 GPR75-ASB3A0A0A6YYF3 556 aa17.7■□□□□ 0.42
CACFD1-202ENST00000316948 RGS16O15492 202 aaPredicted RBP17.7■□□□□ 0.42
CACFD1-202ENST00000316948 PON1P27169 355 aa17.7■□□□□ 0.42
CACFD1-202ENST00000316948 PMS2P54278 862 aa17.7■□□□□ 0.42
CACFD1-202ENST00000316948 RHBDL3P58872 404 aa17.7■□□□□ 0.42
CACFD1-202ENST00000316948 DR1Q01658 176 aa17.7■□□□□ 0.42
CACFD1-202ENST00000316948 UBAP2Q5T6F2 1119 aaKnown RBP17.7■□□□□ 0.42
CACFD1-202ENST00000316948 DENND2CQ68D51 928 aa17.7■□□□□ 0.42
CACFD1-202ENST00000316948 ATXN2LQ8WWM7 1075 aaKnown RBP17.7■□□□□ 0.42
CACFD1-202ENST00000316948 HAS1Q92839 578 aa17.7■□□□□ 0.42
CACFD1-202ENST00000316948 ABCF3Q9NUQ8 709 aa17.7■□□□□ 0.42
CACFD1-202ENST00000316948 SLC12A4Q9UP95 1085 aa17.7■□□□□ 0.42
CACFD1-202ENST00000316948 BZW2Q9Y6E2 419 aaKnown RBP17.7■□□□□ 0.42
CACFD1-202ENST00000316948 TNRC6CQ9HCJ0 1690 aaKnown RBP17.7■□□□□ 0.42
CACFD1-202ENST00000316948 MYH4Q9Y623 1939 aa17.7■□□□□ 0.42
CACFD1-202ENST00000316948 ANP32DO95626 131 aa17.69■□□□□ 0.42
CACFD1-202ENST00000316948 ABCB4P21439 1286 aa17.69■□□□□ 0.42
CACFD1-202ENST00000316948 SMARCA1P28370 1054 aa17.69■□□□□ 0.42
CACFD1-202ENST00000316948 CDC25CP30307 473 aa17.69■□□□□ 0.42
CACFD1-202ENST00000316948 PICALMQ13492 652 aa17.69■□□□□ 0.42
CACFD1-202ENST00000316948 NEK9Q8TD19 979 aa17.69■□□□□ 0.42
CACFD1-202ENST00000316948 ARHGEF1Q92888 912 aaKnown RBP17.69■□□□□ 0.42
CACFD1-202ENST00000316948 CENPTQ96BT3 561 aa17.69■□□□□ 0.42
CACFD1-202ENST00000316948 RAB17Q9H0T7 212 aa17.69■□□□□ 0.42
CACFD1-202ENST00000316948 CD209Q9NNX6 404 aa17.69■□□□□ 0.42
CACFD1-202ENST00000316948 ARMCX3Q9UH62 379 aaPredicted RBP17.69■□□□□ 0.42
CACFD1-202ENST00000316948 DDX25Q9UHL0 483 aaKnown RBP17.69■□□□□ 0.42
CACFD1-202ENST00000316948 AGAP1Q9UPQ3 857 aa17.69■□□□□ 0.42
CACFD1-202ENST00000316948 PLA2G4BP0C869 781 aa17.69■□□□□ 0.42
CACFD1-202ENST00000316948 MARSP56192 900 aaKnown RBP17.69■□□□□ 0.42
CACFD1-202ENST00000316948 SLC29A2Q14542 456 aa17.69■□□□□ 0.42
CACFD1-202ENST00000316948 TRPM8Q7Z2W7 1104 aa17.69■□□□□ 0.42
CACFD1-202ENST00000316948 SEC14L1Q92503 715 aa17.69■□□□□ 0.42
CACFD1-202ENST00000316948 RNF25Q96BH1 459 aaPredicted RBP17.69■□□□□ 0.42
CACFD1-202ENST00000316948 ADAM7Q9H2U9 754 aa17.69■□□□□ 0.42
CACFD1-202ENST00000316948 EPB41L4BQ9H329 900 aa17.69■□□□□ 0.42
CACFD1-202ENST00000316948 PPP1R9AQ9ULJ8 1098 aa17.69■□□□□ 0.42
CACFD1-202ENST00000316948 DAAM1Q9Y4D1 1078 aa17.69■□□□□ 0.42
CACFD1-202ENST00000316948 PCDHA2Q9Y5H9 948 aa17.69■□□□□ 0.42
CACFD1-202ENST00000316948 POTEB3A0JP26 581 aa17.68■□□□□ 0.42
CACFD1-202ENST00000316948 POTECB2RU33 542 aa17.68■□□□□ 0.42
CACFD1-202ENST00000316948 DDX3XO00571 662 aaKnown RBP eCLIP17.68■□□□□ 0.425e-8■■■□□ 18.6
CACFD1-202ENST00000316948 PPP1R11O60927 126 aaPredicted RBP17.68■□□□□ 0.42
CACFD1-202ENST00000316948 GFPT2O94808 682 aa17.68■□□□□ 0.42
CACFD1-202ENST00000316948 CASP5P51878 434 aa17.68■□□□□ 0.42
CACFD1-202ENST00000316948 GALCP54803 685 aa17.68■□□□□ 0.42
CACFD1-202ENST00000316948 KCNJ2P63252 427 aa17.68■□□□□ 0.42
CACFD1-202ENST00000316948 GPSM2P81274 684 aa17.68■□□□□ 0.42
CACFD1-202ENST00000316948 POU5F1Q01860 360 aaKnown RBP17.68■□□□□ 0.42
CACFD1-202ENST00000316948 CCDC38Q502W7 563 aa17.68■□□□□ 0.42
CACFD1-202ENST00000316948 LRCH2Q5VUJ6 765 aa17.68■□□□□ 0.42
CACFD1-202ENST00000316948 TTBK2Q6IQ55 1244 aa17.68■□□□□ 0.42
CACFD1-202ENST00000316948 POTEBQ6S5H4 581 aa17.68■□□□□ 0.42
CACFD1-202ENST00000316948 SLFN11Q7Z7L1 901 aa17.68■□□□□ 0.42
CACFD1-202ENST00000316948 VPS36Q86VN1 386 aa17.68■□□□□ 0.42
CACFD1-202ENST00000316948 SYCE1Q8N0S2 351 aa17.68■□□□□ 0.42
CACFD1-202ENST00000316948 ERVK-5Q9HDB9 667 aa17.68■□□□□ 0.42
CACFD1-202ENST00000316948 PCDHA12Q9UN75 941 aa17.68■□□□□ 0.42
CACFD1-202ENST00000316948 ASAP2O43150 1006 aa17.68■□□□□ 0.42
CACFD1-202ENST00000316948 UFL1O94874 794 aa17.68■□□□□ 0.42
CACFD1-202ENST00000316948 AFPP02771 609 aaKnown RBP17.68■□□□□ 0.42
CACFD1-202ENST00000316948 AKR1B1P15121 316 aa17.68■□□□□ 0.42
CACFD1-202ENST00000316948 MFSD14BQ5SR56 506 aa17.68■□□□□ 0.42
CACFD1-202ENST00000316948 NAIF1Q69YI7 327 aaPredicted RBP17.68■□□□□ 0.42
CACFD1-202ENST00000316948 FOXR2Q6PJQ5 311 aa17.68■□□□□ 0.42
CACFD1-202ENST00000316948 PIGWQ7Z7B1 504 aa17.68■□□□□ 0.42
CACFD1-202ENST00000316948 FBXO25Q8TCJ0 367 aa17.68■□□□□ 0.42
CACFD1-202ENST00000316948 HES6Q96HZ4 224 aa17.68■□□□□ 0.42
CACFD1-202ENST00000316948 TXLNGYQ9BZA5 131 aa17.68■□□□□ 0.42
CACFD1-202ENST00000316948 PABPC3Q9H361 631 aaKnown RBP17.68■□□□□ 0.42
CACFD1-202ENST00000316948 MTMR4Q9NYA4 1195 aa17.68■□□□□ 0.42
CACFD1-202ENST00000316948 RTN2O75298 545 aa17.68■□□□□ 0.42
CACFD1-202ENST00000316948 KRT13P13646 458 aa17.68■□□□□ 0.42
CACFD1-202ENST00000316948 SLC16A2P36021 539 aa17.68■□□□□ 0.42
CACFD1-202ENST00000316948 MMP13P45452 471 aa17.68■□□□□ 0.42
CACFD1-202ENST00000316948 FMNL3Q8IVF7 1028 aa17.68■□□□□ 0.42
CACFD1-202ENST00000316948 AGAP11Q8TF27 550 aa17.68■□□□□ 0.42
CACFD1-202ENST00000316948 ERP44Q9BS26 406 aa17.68■□□□□ 0.42
CACFD1-202ENST00000316948 CCDC169A6NNP5 214 aa17.67■□□□□ 0.42
CACFD1-202ENST00000316948 SEPT2Q15019 361 aa17.67■□□□□ 0.42
CACFD1-202ENST00000316948 DCAF12L1Q5VU92 463 aa17.67■□□□□ 0.42
CACFD1-202ENST00000316948 DPY19L2P1Q6NXN4 242 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms