RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 TRIM71Q2Q1W2 868 aaKnown RBP8.8□□□□□ -1
CDC42-201ENST00000315554 XKR3Q5GH77 459 aa8.8□□□□□ -1
CDC42-201ENST00000315554 SPECC1Q5M775 1068 aa8.8□□□□□ -1
CDC42-201ENST00000315554 MTHFD1LQ6UB35 978 aa8.8□□□□□ -1
CDC42-201ENST00000315554 ANO5Q75V66 913 aa8.8□□□□□ -1
CDC42-201ENST00000315554 SERINC5Q86VE9 423 aa8.8□□□□□ -1
CDC42-201ENST00000315554 LRRC71Q8N4P6 559 aa8.8□□□□□ -1
CDC42-201ENST00000315554 SNX29Q8TEQ0 813 aa8.8□□□□□ -1
CDC42-201ENST00000315554 PIGOQ8TEQ8 1089 aa8.8□□□□□ -1
CDC42-201ENST00000315554 DNAJB3Q8WWF6 145 aa8.8□□□□□ -1
CDC42-201ENST00000315554 ZNF668Q96K58 619 aaPredicted RBP8.8□□□□□ -1
CDC42-201ENST00000315554 FAM167AQ96KS9 214 aa8.8□□□□□ -1
CDC42-201ENST00000315554 CLIC6Q96NY7 704 aa8.8□□□□□ -1
CDC42-201ENST00000315554 HSD17B14Q9BPX1 270 aa8.8□□□□□ -1
CDC42-201ENST00000315554 WNT8AQ9H1J5 351 aa8.8□□□□□ -1
CDC42-201ENST00000315554 NRBP2Q9NSY0 501 aa8.8□□□□□ -1
CDC42-201ENST00000315554 CEP131Q9UPN4 1083 aa8.8□□□□□ -1
CDC42-201ENST00000315554 DNAH12Q6ZR08 3092 aa8.8□□□□□ -1
CDC42-201ENST00000315554 CEP290O15078 2479 aa8.79□□□□□ -1
CDC42-201ENST00000315554 MBLAC1A4D2B0 266 aaPredicted RBP8.79□□□□□ -1
CDC42-201ENST00000315554 RRN3P2A6NIE6 340 aa8.79□□□□□ -1
CDC42-201ENST00000315554 LAD1O00515 517 aa8.79□□□□□ -1
CDC42-201ENST00000315554 LCE2BO14633 110 aa8.79□□□□□ -1
CDC42-201ENST00000315554 C22orf31O95567 290 aa8.79□□□□□ -1
CDC42-201ENST00000315554 ACRP10323 421 aa8.79□□□□□ -1
CDC42-201ENST00000315554 GNAT1P11488 350 aa8.79□□□□□ -1
CDC42-201ENST00000315554 CKBP12277 381 aa8.79□□□□□ -1
CDC42-201ENST00000315554 CSF2RAP15509 400 aa8.79□□□□□ -1
CDC42-201ENST00000315554 NCLP19338 710 aaKnown RBP8.79□□□□□ -1
CDC42-201ENST00000315554 YWHABP31946 246 aaKnown RBP8.79□□□□□ -1
CDC42-201ENST00000315554 CLCN3P51790 818 aa8.79□□□□□ -1
CDC42-201ENST00000315554 EPHB4P54760 987 aa8.79□□□□□ -1
CDC42-201ENST00000315554 FOXK1P85037 733 aa8.79□□□□□ -1
CDC42-201ENST00000315554 XKR9Q5GH70 373 aa8.79□□□□□ -1
CDC42-201ENST00000315554 ZNF484Q5JVG2 852 aa8.79□□□□□ -1
CDC42-201ENST00000315554 ZNF618Q5T7W0 954 aa8.79□□□□□ -1
CDC42-201ENST00000315554 DEFB128Q7Z7B8 93 aa8.79□□□□□ -1
CDC42-201ENST00000315554 CATSPER3Q86XQ3 398 aa8.79□□□□□ -1
CDC42-201ENST00000315554 METTL13Q8N6R0 699 aa8.79□□□□□ -1
CDC42-201ENST00000315554 IGSF22Q8N9C0 903 aa8.79□□□□□ -1
CDC42-201ENST00000315554 RETREG2Q8NC44 543 aa8.79□□□□□ -1
CDC42-201ENST00000315554 ERMNQ8TAM6 284 aa8.79□□□□□ -1
CDC42-201ENST00000315554 CEP170P1Q96L14 293 aa8.79□□□□□ -1
CDC42-201ENST00000315554 ZNF396Q96N95 335 aaPredicted RBP8.79□□□□□ -1
CDC42-201ENST00000315554 LBHD1Q9BQE6 289 aaPredicted RBP8.79□□□□□ -1
CDC42-201ENST00000315554 MMTAG2Q9BU76 263 aaKnown RBP8.79□□□□□ -1
CDC42-201ENST00000315554 OSBPL7Q9BZF2 842 aa8.79□□□□□ -1
CDC42-201ENST00000315554 ZSWIM4Q9H7M6 989 aa8.79□□□□□ -1
CDC42-201ENST00000315554 SUGCTQ9HAC7 445 aa8.79□□□□□ -1
CDC42-201ENST00000315554 FBXO2Q9UK22 296 aaPredicted RBP8.79□□□□□ -1
CDC42-201ENST00000315554 TRIP12Q14669 1992 aaPredicted RBP8.79□□□□□ -1
CDC42-201ENST00000315554 GOLGA8CPA6NN73 597 aa8.78□□□□□ -1
CDC42-201ENST00000315554 BMP15O95972 392 aa8.78□□□□□ -1
CDC42-201ENST00000315554 DDIT3P35638 169 aa8.78□□□□□ -1
CDC42-201ENST00000315554 NASPP49321 788 aaPredicted RBP8.78□□□□□ -1
CDC42-201ENST00000315554 DRP2Q13474 957 aa8.78□□□□□ -1
CDC42-201ENST00000315554 BFSP2Q13515 415 aa8.78□□□□□ -1
CDC42-201ENST00000315554 PDIA5Q14554 519 aa8.78□□□□□ -1
CDC42-201ENST00000315554 SLC39A14Q15043 492 aa8.78□□□□□ -1
CDC42-201ENST00000315554 TARBP2Q15633 366 aaKnown RBP8.78□□□□□ -1
CDC42-201ENST00000315554 KRT79Q5XKE5 535 aa8.78□□□□□ -1
CDC42-201ENST00000315554 ARL6IP4Q66PJ3 421 aaKnown RBP8.78□□□□□ -1
CDC42-201ENST00000315554 USP49Q70CQ1 688 aa8.78□□□□□ -1
CDC42-201ENST00000315554 LRRC8DQ7L1W4 858 aa8.78□□□□□ -1
CDC42-201ENST00000315554 C4orf19Q8IY42 314 aa8.78□□□□□ -1
CDC42-201ENST00000315554 CCDC155Q8N6L0 562 aa8.78□□□□□ -1
CDC42-201ENST00000315554 LINC00301Q8NCQ3 95 aa8.78□□□□□ -1
CDC42-201ENST00000315554 NEK9Q8TD19 979 aa8.78□□□□□ -1
CDC42-201ENST00000315554 TNPO1Q92973 898 aaKnown RBP8.78□□□□□ -1
CDC42-201ENST00000315554 CEP89Q96ST8 783 aa8.78□□□□□ -1
CDC42-201ENST00000315554 POLR3CQ9BUI4 534 aaPredicted RBP8.78□□□□□ -1
CDC42-201ENST00000315554 NIFKQ9BYG3 293 aaKnown RBP8.78□□□□□ -1
CDC42-201ENST00000315554 RAB34Q9BZG1 259 aa8.78□□□□□ -1
CDC42-201ENST00000315554 CSRNP2Q9H175 543 aa8.78□□□□□ -1
CDC42-201ENST00000315554 TUFT1Q9NNX1 390 aa8.78□□□□□ -1
CDC42-201ENST00000315554 CYP26B1Q9NR63 512 aa8.78□□□□□ -1
CDC42-201ENST00000315554 DDX19AQ9NUU7 478 aaKnown RBP8.78□□□□□ -1
CDC42-201ENST00000315554 KIAA1024Q9UPX6 916 aa8.78□□□□□ -1
CDC42-201ENST00000315554 GINS2Q9Y248 185 aa8.78□□□□□ -1
CDC42-201ENST00000315554 PCDHA2Q9Y5H9 948 aa8.78□□□□□ -1
CDC42-201ENST00000315554 COL1A2P08123 1366 aa8.78□□□□□ -1
CDC42-201ENST00000315554 LTBP2Q14767 1821 aa8.77□□□□□ -1
CDC42-201ENST00000315554 RSPH10B2B2RC85 870 aa8.77□□□□□ -1
CDC42-201ENST00000315554 E9PMD0 336 aa8.77□□□□□ -1
CDC42-201ENST00000315554 STK25O00506 426 aa8.77□□□□□ -1
CDC42-201ENST00000315554 SPTLC2O15270 562 aa8.77□□□□□ -1
CDC42-201ENST00000315554 USO1O60763 962 aaKnown RBP8.77□□□□□ -1
CDC42-201ENST00000315554 DKC1O60832 514 aaKnown RBP eCLIP8.77□□□□□ -1
CDC42-201ENST00000315554 VTNP04004 478 aa8.77□□□□□ -1
CDC42-201ENST00000315554 IQCF3P0C7M6 154 aa8.77□□□□□ -1
CDC42-201ENST00000315554 RSPH10BP0C881 870 aa8.77□□□□□ -1
CDC42-201ENST00000315554 SELPP16109 830 aa8.77□□□□□ -1
CDC42-201ENST00000315554 RPA1P27694 616 aa8.77□□□□□ -1
CDC42-201ENST00000315554 FPGSQ05932 587 aa8.77□□□□□ -1
CDC42-201ENST00000315554 TBC1D8BQ0IIM8 1120 aa8.77□□□□□ -1
CDC42-201ENST00000315554 MBTPS1Q14703 1052 aa8.77□□□□□ -1
CDC42-201ENST00000315554 KARSQ15046 597 aaKnown RBP8.77□□□□□ -1
CDC42-201ENST00000315554 HAUS3Q68CZ6 603 aa8.77□□□□□ -1
CDC42-201ENST00000315554 MFSD5Q6N075 450 aa8.77□□□□□ -1
CDC42-201ENST00000315554 EFCAB12Q6NXP0 572 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms