RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 MAP1SQ66K74 1059 aaPredicted RBP14.55□□□□□ -0.08
RFFL-201ENST00000315249 MAGOHBQ96A72 148 aaKnown RBP14.55□□□□□ -0.08
RFFL-201ENST00000315249 TTC25Q96NG3 672 aa14.55□□□□□ -0.08
RFFL-201ENST00000315249 RABEP2Q9H5N1 569 aa14.55□□□□□ -0.08
RFFL-201ENST00000315249 TRPC7Q9HCX4 862 aa14.55□□□□□ -0.08
RFFL-201ENST00000315249 HPCAL4Q9UM19 191 aa14.55□□□□□ -0.08
RFFL-201ENST00000315249 CPS1P31327 1500 aa14.55□□□□□ -0.08
RFFL-201ENST00000315249 MAPK8IP2Q13387 824 aaPredicted RBP14.55□□□□□ -0.08
RFFL-201ENST00000315249 VCPKMTQ9H867 229 aa14.55□□□□□ -0.08
RFFL-201ENST00000315249 EFCAB13Q8IY85 973 aa14.55□□□□□ -0.08
RFFL-201ENST00000315249 POLLQ9UGP5 575 aa14.55□□□□□ -0.08
RFFL-201ENST00000315249 CCDC160A6NGH7 325 aa14.55□□□□□ -0.08
RFFL-201ENST00000315249 CTNND1O60716 968 aaKnown RBP14.55□□□□□ -0.08
RFFL-201ENST00000315249 CAPN15O75808 1086 aa14.55□□□□□ -0.08
RFFL-201ENST00000315249 MYBP10242 640 aa14.55□□□□□ -0.08
RFFL-201ENST00000315249 CD2BP2O95400 341 aaKnown RBP14.54□□□□□ -0.08
RFFL-201ENST00000315249 CASP1P29466 404 aa14.54□□□□□ -0.08
RFFL-201ENST00000315249 IER5Q5VY09 327 aa14.54□□□□□ -0.08
RFFL-201ENST00000315249 ARHGEF18Q6ZSZ5 1173 aa14.54□□□□□ -0.08
RFFL-201ENST00000315249 CCDC13Q8IYE1 715 aa14.54□□□□□ -0.08
RFFL-201ENST00000315249 SUDS3Q9H7L9 328 aaPredicted RBP14.54□□□□□ -0.08
RFFL-201ENST00000315249 PRR12Q9ULL5 1215 aa14.54□□□□□ -0.08
RFFL-201ENST00000315249 ORC4O43929 436 aa14.54□□□□□ -0.08
RFFL-201ENST00000315249 NNMTP40261 264 aa14.54□□□□□ -0.08
RFFL-201ENST00000315249 PPP6R3Q5H9R7 873 aaPredicted RBP14.54□□□□□ -0.08
RFFL-201ENST00000315249 RUFY4Q6ZNE9 571 aa14.54□□□□□ -0.08
RFFL-201ENST00000315249 MCUQ8NE86 351 aa14.54□□□□□ -0.08
RFFL-201ENST00000315249 PRMT6Q96LA8 375 aaPredicted RBP14.54□□□□□ -0.08
RFFL-201ENST00000315249 RWDD2AQ9UIY3 292 aa14.54□□□□□ -0.08
RFFL-201ENST00000315249 PSMA2P25787 234 aa14.54□□□□□ -0.08
RFFL-201ENST00000315249 TOB2Q14106 344 aaPredicted RBP14.54□□□□□ -0.08
RFFL-201ENST00000315249 XXYLT1Q8NBI6 393 aa14.54□□□□□ -0.08
RFFL-201ENST00000315249 SPDYE1Q8NFV5 336 aaPredicted RBP14.54□□□□□ -0.08
RFFL-201ENST00000315249 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.54□□□□□ -0.08
RFFL-201ENST00000315249 RRP9O43818 475 aaKnown RBP14.54□□□□□ -0.08
RFFL-201ENST00000315249 ALX1Q15699 326 aa14.54□□□□□ -0.08
RFFL-201ENST00000315249 CEP55Q53EZ4 464 aa14.54□□□□□ -0.08
RFFL-201ENST00000315249 GPT2Q8TD30 523 aa14.54□□□□□ -0.08
RFFL-201ENST00000315249 CDKL2Q92772 493 aa14.54□□□□□ -0.08
RFFL-201ENST00000315249 SMARCAD1Q9H4L7 1026 aa14.54□□□□□ -0.08
RFFL-201ENST00000315249 PLCB1Q9NQ66 1216 aa14.54□□□□□ -0.08
RFFL-201ENST00000315249 SAMSN1Q9NSI8 373 aaKnown RBP14.54□□□□□ -0.08
RFFL-201ENST00000315249 KLRK1P26718 216 aa14.54□□□□□ -0.08
RFFL-201ENST00000315249 HDAC11Q96DB2 347 aa14.54□□□□□ -0.08
RFFL-201ENST00000315249 ACAP3Q96P50 834 aa14.54□□□□□ -0.08
RFFL-201ENST00000315249 TYW1Q9NV66 732 aaKnown RBP14.54□□□□□ -0.08
RFFL-201ENST00000315249 RGL1Q9NZL6 768 aa14.54□□□□□ -0.08
RFFL-201ENST00000315249 SSTR3P32745 418 aaPredicted RBP14.54□□□□□ -0.08
RFFL-201ENST00000315249 RBL2Q08999 1139 aa14.54□□□□□ -0.08
RFFL-201ENST00000315249 SLC10A5Q5PT55 438 aa14.54□□□□□ -0.08
RFFL-201ENST00000315249 TMEM270Q6UE05 265 aa14.54□□□□□ -0.08
RFFL-201ENST00000315249 ATP6V1E2Q96A05 226 aa14.54□□□□□ -0.08
RFFL-201ENST00000315249 ALKBH8Q96BT7 664 aaKnown RBP14.54□□□□□ -0.08
RFFL-201ENST00000315249 KIAA1586Q9HCI6 787 aa14.54□□□□□ -0.08
RFFL-201ENST00000315249 TMTC4Q5T4D3 741 aa14.53□□□□□ -0.08
RFFL-201ENST00000315249 TMEM143Q96AN5 459 aa14.53□□□□□ -0.08
RFFL-201ENST00000315249 PTPRUQ92729 1446 aa14.53□□□□□ -0.08
RFFL-201ENST00000315249 SLC25A27O95847 323 aa14.53□□□□□ -0.08
RFFL-201ENST00000315249 ZNF543Q08ER8 600 aa14.53□□□□□ -0.08
RFFL-201ENST00000315249 FRMPD1Q5SYB0 1578 aa14.53□□□□□ -0.08
RFFL-201ENST00000315249 ADORA2BP29275 332 aa14.53□□□□□ -0.08
RFFL-201ENST00000315249 GARSP41250 739 aaKnown RBP14.53□□□□□ -0.08
RFFL-201ENST00000315249 ATN1P54259 1190 aaPredicted RBP14.53□□□□□ -0.08
RFFL-201ENST00000315249 LRRC63Q05C16 580 aa14.53□□□□□ -0.08
RFFL-201ENST00000315249 CC2D1AQ6P1N0 951 aaPredicted RBP14.53□□□□□ -0.08
RFFL-201ENST00000315249 SRBD1Q8N5C6 995 aaKnown RBP14.53□□□□□ -0.08
RFFL-201ENST00000315249 GTF3C2Q8WUA4 911 aaPredicted RBP14.53□□□□□ -0.08
RFFL-201ENST00000315249 GLT1D1Q96MS3 346 aa14.53□□□□□ -0.08
RFFL-201ENST00000315249 PHLPP2Q6ZVD8 1323 aa14.53□□□□□ -0.08
RFFL-201ENST00000315249 CIB2O75838 187 aa14.53□□□□□ -0.08
RFFL-201ENST00000315249 CCNE1P24864 410 aa14.53□□□□□ -0.08
RFFL-201ENST00000315249 NBPF9Q3BBW0 867 aa14.53□□□□□ -0.08
RFFL-201ENST00000315249 NEK9Q8TD19 979 aa14.53□□□□□ -0.08
RFFL-201ENST00000315249 FBXO41Q8TF61 875 aa14.53□□□□□ -0.08
RFFL-201ENST00000315249 PMLP29590 882 aa14.53□□□□□ -0.08
RFFL-201ENST00000315249 PPP4R3CPQ6ZMV5 832 aa14.53□□□□□ -0.08
RFFL-201ENST00000315249 MB21D1Q8N884 522 aa14.53□□□□□ -0.08
RFFL-201ENST00000315249 RAD54LQ92698 747 aa14.53□□□□□ -0.08
RFFL-201ENST00000315249 PNPLA7Q6ZV29 1317 aa14.53□□□□□ -0.08
RFFL-201ENST00000315249 LRRD1A4D1F6 860 aa14.53□□□□□ -0.08
RFFL-201ENST00000315249 RGS16O15492 202 aaPredicted RBP14.53□□□□□ -0.08
RFFL-201ENST00000315249 RPS6KA5O75582 802 aa14.53□□□□□ -0.08
RFFL-201ENST00000315249 GRIK1P39086 918 aa14.53□□□□□ -0.08
RFFL-201ENST00000315249 RABL6Q3YEC7 729 aaPredicted RBP14.53□□□□□ -0.08
RFFL-201ENST00000315249 SGO2Q562F6 1265 aa14.53□□□□□ -0.08
RFFL-201ENST00000315249 UNC13DQ70J99 1090 aa14.53□□□□□ -0.08
RFFL-201ENST00000315249 CALCOCO1Q9P1Z2 691 aa14.53□□□□□ -0.08
RFFL-201ENST00000315249 PCDHB7Q9Y5E2 793 aa14.53□□□□□ -0.08
RFFL-201ENST00000315249 POC1B-GALNT4F8VUJ3 575 aa14.52□□□□□ -0.08
RFFL-201ENST00000315249 BASP1P80723 227 aaKnown RBP14.52□□□□□ -0.08
RFFL-201ENST00000315249 RBAKQ9NYW8 714 aaPredicted RBP14.52□□□□□ -0.08
RFFL-201ENST00000315249 PFASO15067 1338 aa14.52□□□□□ -0.08
RFFL-201ENST00000315249 EBAG9O00559 213 aa14.52□□□□□ -0.08
RFFL-201ENST00000315249 NME3Q13232 169 aa14.52□□□□□ -0.08
RFFL-201ENST00000315249 THOC5Q13769 683 aaKnown RBP14.52□□□□□ -0.08
RFFL-201ENST00000315249 CPA4Q9UI42 421 aa14.52□□□□□ -0.08
RFFL-201ENST00000315249 CSF1RP07333 972 aa14.52□□□□□ -0.09
RFFL-201ENST00000315249 CPT1AP50416 773 aa14.52□□□□□ -0.09
RFFL-201ENST00000315249 USP11P51784 963 aa14.52□□□□□ -0.09
RFFL-201ENST00000315249 RESTQ13127 1097 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms