RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 GPSM2P81274 684 aa14.62□□□□□ -0.07
SKA3-202ENST00000314759 PICALMQ13492 652 aa14.62□□□□□ -0.07
SKA3-202ENST00000314759 KCTD1Q719H9 257 aa14.62□□□□□ -0.07
SKA3-202ENST00000314759 PTF1AQ7RTS3 328 aa14.62□□□□□ -0.07
SKA3-202ENST00000314759 CACNA2D3Q8IZS8 1091 aa14.62□□□□□ -0.07
SKA3-202ENST00000314759 SYCE1Q8N0S2 351 aa14.62□□□□□ -0.07
SKA3-202ENST00000314759 MDM1Q8TC05 714 aa14.62□□□□□ -0.07
SKA3-202ENST00000314759 SLC35C1Q96A29 364 aa14.62□□□□□ -0.07
SKA3-202ENST00000314759 REEP2Q9BRK0 252 aa14.62□□□□□ -0.07
SKA3-202ENST00000314759 BCAS3Q9H6U6 928 aa14.62□□□□□ -0.07
SKA3-202ENST00000314759 GNPATO15228 680 aa14.61□□□□□ -0.07
SKA3-202ENST00000314759 PPP1R12BO60237 982 aaPredicted RBP14.61□□□□□ -0.07
SKA3-202ENST00000314759 GALCP54803 685 aa14.61□□□□□ -0.07
SKA3-202ENST00000314759 NPEPPSP55786 919 aa14.61□□□□□ -0.07
SKA3-202ENST00000314759 PABPC4Q13310 644 aaKnown RBP eCLIP14.61□□□□□ -0.076e-8■□□□□ 9.5
SKA3-202ENST00000314759 VPS36Q86VN1 386 aa14.61□□□□□ -0.07
SKA3-202ENST00000314759 OLIG1Q8TAK6 271 aa14.61□□□□□ -0.07
SKA3-202ENST00000314759 ATP8B4Q8TF62 1192 aa14.61□□□□□ -0.07
SKA3-202ENST00000314759 FAXDC2Q96IV6 333 aa14.61□□□□□ -0.07
SKA3-202ENST00000314759 PSMD1Q99460 953 aa14.61□□□□□ -0.07
SKA3-202ENST00000314759 TXLNGYQ9BZA5 131 aa14.61□□□□□ -0.07
SKA3-202ENST00000314759 FAM114A2Q9NRY5 505 aa14.61□□□□□ -0.07
SKA3-202ENST00000314759 GCNT4Q9P109 453 aa14.61□□□□□ -0.07
SKA3-202ENST00000314759 INTUQ9ULD6 942 aa14.61□□□□□ -0.07
SKA3-202ENST00000314759 ATP8A1Q9Y2Q0 1164 aa14.61□□□□□ -0.07
SKA3-202ENST00000314759 GAKO14976 1311 aa14.61□□□□□ -0.07
SKA3-202ENST00000314759 COL24A1Q17RW2 1714 aa14.61□□□□□ -0.07
SKA3-202ENST00000314759 PDXKO00764 312 aa14.61□□□□□ -0.07
SKA3-202ENST00000314759 BUB1BO60566 1050 aaPredicted RBP14.61□□□□□ -0.07
SKA3-202ENST00000314759 ACCSLQ4AC99 568 aa14.61□□□□□ -0.07
SKA3-202ENST00000314759 PPP1R9AQ9ULJ8 1098 aa14.61□□□□□ -0.07
SKA3-202ENST00000314759 RTCBQ9Y3I0 505 aaKnown RBP14.61□□□□□ -0.07
SKA3-202ENST00000314759 ATP8B3O60423 1300 aa14.61□□□□□ -0.07
SKA3-202ENST00000314759 TNRC6CQ9HCJ0 1690 aaKnown RBP14.6□□□□□ -0.07
SKA3-202ENST00000314759 PPFIA2O75334 1257 aa14.6□□□□□ -0.07
SKA3-202ENST00000314759 GFPT2O94808 682 aa14.6□□□□□ -0.07
SKA3-202ENST00000314759 IL1R1P14778 569 aa14.6□□□□□ -0.07
SKA3-202ENST00000314759 DRD4P21917 467 aa14.6□□□□□ -0.07
SKA3-202ENST00000314759 SPIRE1Q08AE8 756 aa14.6□□□□□ -0.07
SKA3-202ENST00000314759 DCAF12L1Q5VU92 463 aa14.6□□□□□ -0.07
SKA3-202ENST00000314759 LNX1Q8TBB1 728 aaPredicted RBP14.6□□□□□ -0.07
SKA3-202ENST00000314759 TLCD1Q96CP7 247 aa14.6□□□□□ -0.07
SKA3-202ENST00000314759 AMFRQ9UKV5 643 aa14.6□□□□□ -0.07
SKA3-202ENST00000314759 TTC7AQ9ULT0 858 aaPredicted RBP14.6□□□□□ -0.07
SKA3-202ENST00000314759 ARFGEF1Q9Y6D6 1849 aa14.6□□□□□ -0.07
SKA3-202ENST00000314759 CALUO43852 315 aaPredicted RBP14.6□□□□□ -0.07
SKA3-202ENST00000314759 UFL1O94874 794 aa14.6□□□□□ -0.07
SKA3-202ENST00000314759 NR3C1P04150 777 aa14.6□□□□□ -0.07
SKA3-202ENST00000314759 SPATA31C1P0DKV0 1188 aa14.6□□□□□ -0.07
SKA3-202ENST00000314759 KCNA1Q09470 495 aa14.6□□□□□ -0.07
SKA3-202ENST00000314759 IFFO1Q0D2I5 559 aa14.6□□□□□ -0.07
SKA3-202ENST00000314759 GKAP1Q5VSY0 366 aaPredicted RBP14.6□□□□□ -0.07
SKA3-202ENST00000314759 TLDC1Q6P9B6 456 aa14.6□□□□□ -0.07
SKA3-202ENST00000314759 ARMC9Q7Z3E5 817 aa14.6□□□□□ -0.07
SKA3-202ENST00000314759 CPLX4Q7Z7G2 160 aa14.6□□□□□ -0.07
SKA3-202ENST00000314759 SLC30A5Q8TAD4 765 aa14.6□□□□□ -0.07
SKA3-202ENST00000314759 SLC35G2Q8TBE7 412 aa14.6□□□□□ -0.07
SKA3-202ENST00000314759 CCT6BQ92526 530 aa14.6□□□□□ -0.07
SKA3-202ENST00000314759 HVCN1Q96D96 273 aa14.6□□□□□ -0.07
SKA3-202ENST00000314759 TBC1D31Q96DN5 1066 aa14.6□□□□□ -0.07
SKA3-202ENST00000314759 FMO2Q99518 471 aa14.6□□□□□ -0.07
SKA3-202ENST00000314759 NAP1L4Q99733 375 aaKnown RBP14.6□□□□□ -0.07
SKA3-202ENST00000314759 ASTN1O14525 1302 aa14.6□□□□□ -0.07
SKA3-202ENST00000314759 CYP3A7-CYP3A51PA0A087WV96 503 aa14.59□□□□□ -0.07
SKA3-202ENST00000314759 RSPH10B2B2RC85 870 aa14.59□□□□□ -0.07
SKA3-202ENST00000314759 F8W031 263 aaPredicted RBP14.59□□□□□ -0.07
SKA3-202ENST00000314759 CLIC2O15247 247 aa14.59□□□□□ -0.07
SKA3-202ENST00000314759 DDX3YO15523 660 aaKnown RBP14.59□□□□□ -0.07
SKA3-202ENST00000314759 CAND2O75155 1236 aa14.59□□□□□ -0.07
SKA3-202ENST00000314759 RSPH10BP0C881 870 aa14.59□□□□□ -0.07
SKA3-202ENST00000314759 CYP3A7P24462 503 aa14.59□□□□□ -0.07
SKA3-202ENST00000314759 COPB2P35606 906 aa14.59□□□□□ -0.07
SKA3-202ENST00000314759 LACTB2Q53H82 288 aaPredicted RBP14.59□□□□□ -0.07
SKA3-202ENST00000314759 DHX37Q8IY37 1157 aaKnown RBP14.59□□□□□ -0.07
SKA3-202ENST00000314759 SYT2Q8N9I0 419 aaPredicted RBP14.59□□□□□ -0.07
SKA3-202ENST00000314759 EPB41L4BQ9H329 900 aa14.59□□□□□ -0.07
SKA3-202ENST00000314759 SPATA31A5Q5VU36 1347 aa14.59□□□□□ -0.07
SKA3-202ENST00000314759 SPATA31A7Q8IWB4 1347 aa14.59□□□□□ -0.07
SKA3-202ENST00000314759 SLC26A4O43511 780 aa14.59□□□□□ -0.07
SKA3-202ENST00000314759 EVI5O60447 810 aa14.59□□□□□ -0.07
SKA3-202ENST00000314759 SHBGP04278 402 aa14.59□□□□□ -0.07
SKA3-202ENST00000314759 CLNS1AP54105 237 aaKnown RBP14.59□□□□□ -0.07
SKA3-202ENST00000314759 XRCC4Q13426 336 aa14.59□□□□□ -0.07
SKA3-202ENST00000314759 ERMARDQ5T6L9 678 aa14.59□□□□□ -0.07
SKA3-202ENST00000314759 RC3H1Q5TC82 1133 aaKnown RBP14.59□□□□□ -0.07
SKA3-202ENST00000314759 GLYCTKQ8IVS8 523 aa14.59□□□□□ -0.07
SKA3-202ENST00000314759 ARHGEF1Q92888 912 aaKnown RBP14.59□□□□□ -0.07
SKA3-202ENST00000314759 ANO3Q9BYT9 981 aa14.59□□□□□ -0.07
SKA3-202ENST00000314759 METTL14Q9HCE5 456 aaKnown RBP14.59□□□□□ -0.07
SKA3-202ENST00000314759 TYW1Q9NV66 732 aaKnown RBP14.59□□□□□ -0.07
SKA3-202ENST00000314759 PNMA2Q9UL42 364 aa14.59□□□□□ -0.07
SKA3-202ENST00000314759 DNM3Q9UQ16 869 aa14.59□□□□□ -0.07
SKA3-202ENST00000314759 DAGLAQ9Y4D2 1042 aa14.59□□□□□ -0.07
SKA3-202ENST00000314759 PCDHB13Q9Y5F0 798 aa14.59□□□□□ -0.07
SKA3-202ENST00000314759 EZRP15311 586 aaKnown RBP14.59□□□□□ -0.07
SKA3-202ENST00000314759 FERP16591 822 aa14.59□□□□□ -0.07
SKA3-202ENST00000314759 PTENP60484 403 aa14.59□□□□□ -0.07
SKA3-202ENST00000314759 PPP2R5AQ15172 486 aa14.59□□□□□ -0.07
SKA3-202ENST00000314759 GPATCH4Q5T3I0 446 aaKnown RBP14.59□□□□□ -0.07
SKA3-202ENST00000314759 ADAT2Q7Z6V5 191 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms