RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 SCN9AQ15858 1988 aa27.64■■■□□ 2.02
HOXB3-201ENST00000311626 EIF3HO15372 352 aaKnown RBP eCLIP27.64■■■□□ 2.01
HOXB3-201ENST00000311626 H2AFZP0C0S5 128 aa27.64■■■□□ 2.01
HOXB3-201ENST00000311626 CIITAP33076 1130 aa27.64■■■□□ 2.01
HOXB3-201ENST00000311626 H2AFVQ71UI9 128 aa27.64■■■□□ 2.01
HOXB3-201ENST00000311626 OTOP1Q7RTM1 612 aa27.64■■■□□ 2.01
HOXB3-201ENST00000311626 ADAT2Q7Z6V5 191 aaKnown RBP27.64■■■□□ 2.01
HOXB3-201ENST00000311626 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.64■■■□□ 2.012e-8■■■■■ 246.4
HOXB3-201ENST00000311626 TMEM59LQ9UK28 342 aa27.64■■■□□ 2.01
HOXB3-201ENST00000311626 NOC2LQ9Y3T9 749 aaKnown RBP27.64■■■□□ 2.01
HOXB3-201ENST00000311626 TCP10L2B9ZVM9 353 aa27.63■■■□□ 2.01
HOXB3-201ENST00000311626 DDX39AO00148 427 aaKnown RBP27.63■■■□□ 2.01
HOXB3-201ENST00000311626 EVI5O60447 810 aa27.63■■■□□ 2.01
HOXB3-201ENST00000311626 FLOT1O75955 427 aa27.63■■■□□ 2.01
HOXB3-201ENST00000311626 GUCY1A3Q02108 690 aa27.63■■■□□ 2.01
HOXB3-201ENST00000311626 TRMT1LQ7Z2T5 733 aaKnown RBP27.63■■■□□ 2.01
HOXB3-201ENST00000311626 RNPC3Q96LT9 517 aaKnown RBP27.63■■■□□ 2.01
HOXB3-201ENST00000311626 HSD17B14Q9BPX1 270 aa27.63■■■□□ 2.01
HOXB3-201ENST00000311626 GALCP54803 685 aa27.63■■■□□ 2.01
HOXB3-201ENST00000311626 CBWD6Q4V339 395 aa27.63■■■□□ 2.01
HOXB3-201ENST00000311626 CBWD3Q5JTY5 395 aa27.63■■■□□ 2.01
HOXB3-201ENST00000311626 CBWD5Q5RIA9 395 aa27.63■■■□□ 2.01
HOXB3-201ENST00000311626 POLR3CQ9BUI4 534 aaPredicted RBP27.63■■■□□ 2.01
HOXB3-201ENST00000311626 SEPT11Q9NVA2 429 aaKnown RBP27.63■■■□□ 2.01
HOXB3-201ENST00000311626 PLAAQ9Y263 795 aa27.63■■■□□ 2.01
HOXB3-201ENST00000311626 NRXN2Q9P2S2 1712 aa27.63■■■□□ 2.01
HOXB3-201ENST00000311626 FLT3P36888 993 aa27.62■■■□□ 2.01
HOXB3-201ENST00000311626 ARHGAP44Q17R89 818 aa27.62■■■□□ 2.01
HOXB3-201ENST00000311626 BMT2Q1RMZ1 405 aa27.62■■■□□ 2.01
HOXB3-201ENST00000311626 STRIP1Q5VSL9 837 aa27.62■■■□□ 2.01
HOXB3-201ENST00000311626 C1orf186Q6ZWK4 172 aa27.62■■■□□ 2.01
HOXB3-201ENST00000311626 BORCS6Q96GS4 357 aa27.62■■■□□ 2.01
HOXB3-201ENST00000311626 AMACRQ9UHK6 382 aa27.62■■■□□ 2.01
HOXB3-201ENST00000311626 BZW2Q9Y6E2 419 aaKnown RBP27.62■■■□□ 2.01
HOXB3-201ENST00000311626 IGSF9BQ9UPX0 1349 aa27.62■■■□□ 2.01
HOXB3-201ENST00000311626 CLRN2A0PK11 232 aa27.62■■■□□ 2.01
HOXB3-201ENST00000311626 SART1O43290 800 aaKnown RBP27.62■■■□□ 2.01
HOXB3-201ENST00000311626 LRRN2O75325 713 aa27.62■■■□□ 2.01
HOXB3-201ENST00000311626 CELF4Q9BZC1 486 aaKnown RBP27.62■■■□□ 2.01
HOXB3-201ENST00000311626 METTL14Q9HCE5 456 aaKnown RBP27.62■■■□□ 2.01
HOXB3-201ENST00000311626 COPB2P35606 906 aa27.61■■■□□ 2.01
HOXB3-201ENST00000311626 PDE6BP35913 854 aa27.61■■■□□ 2.01
HOXB3-201ENST00000311626 PRKCIP41743 596 aa27.61■■■□□ 2.01
HOXB3-201ENST00000311626 MMP14P50281 582 aa27.61■■■□□ 2.01
HOXB3-201ENST00000311626 NLGN1Q8N2Q7 840 aa27.61■■■□□ 2.01
HOXB3-201ENST00000311626 SCFD2Q8WU76 684 aa27.61■■■□□ 2.01
HOXB3-201ENST00000311626 QTRT2Q9H974 415 aaKnown RBP27.61■■■□□ 2.01
HOXB3-201ENST00000311626 DNAJC12Q9UKB3 198 aa27.61■■■□□ 2.01
HOXB3-201ENST00000311626 ATAD5Q96QE3 1844 aa27.61■■■□□ 2.01
HOXB3-201ENST00000311626 KRIT1O00522 736 aa27.61■■■□□ 2.01
HOXB3-201ENST00000311626 ARP10275 920 aa27.61■■■□□ 2.01
HOXB3-201ENST00000311626 CHRNA5P30532 468 aa27.61■■■□□ 2.01
HOXB3-201ENST00000311626 CORO7P57737 925 aa27.61■■■□□ 2.01
HOXB3-201ENST00000311626 DRAP1Q14919 205 aaPredicted RBP27.61■■■□□ 2.01
HOXB3-201ENST00000311626 CEP85LQ5SZL2 805 aa27.61■■■□□ 2.01
HOXB3-201ENST00000311626 TAS2R14Q9NYV8 317 aa27.61■■■□□ 2.01
HOXB3-201ENST00000311626 SPATA31A6Q5VVP1 1343 aa27.6■■■□□ 2.01
HOXB3-201ENST00000311626 SLC26A4O43511 780 aa27.6■■■□□ 2.01
HOXB3-201ENST00000311626 ECHS1P30084 290 aa27.6■■■□□ 2.01
HOXB3-201ENST00000311626 TRPC5Q9UL62 973 aaPredicted RBP27.6■■■□□ 2.01
HOXB3-201ENST00000311626 NR2E1Q9Y466 385 aa27.6■■■□□ 2.01
HOXB3-201ENST00000311626 BTNL10A8MVZ5 291 aa27.6■■■□□ 2.01
HOXB3-201ENST00000311626 TISP43B9A030 160 aa27.6■■■□□ 2.01
HOXB3-201ENST00000311626 ZBTB48P10074 688 aaPredicted RBP27.6■■■□□ 2.01
HOXB3-201ENST00000311626 C10orf76Q5T2E6 689 aa27.6■■■□□ 2.01
HOXB3-201ENST00000311626 PALB2Q86YC2 1186 aa27.6■■■□□ 2.01
HOXB3-201ENST00000311626 OLIG1Q8TAK6 271 aa27.6■■■□□ 2.01
HOXB3-201ENST00000311626 SH2D3AQ9BRG2 576 aa27.6■■■□□ 2.01
HOXB3-201ENST00000311626 TSPYL1Q9H0U9 437 aa27.6■■■□□ 2.01
HOXB3-201ENST00000311626 TAF1DQ9H5J8 278 aaPredicted RBP27.6■■■□□ 2.01
HOXB3-201ENST00000311626 SLC16A3O15427 465 aaKnown RBP27.59■■■□□ 2.01
HOXB3-201ENST00000311626 PSMC2P35998 433 aaKnown RBP27.59■■■□□ 2.01
HOXB3-201ENST00000311626 TBC1D10BQ4KMP7 808 aaPredicted RBP27.59■■■□□ 2.01
HOXB3-201ENST00000311626 TRIM31Q9BZY9 425 aa27.59■■■□□ 2.01
HOXB3-201ENST00000311626 HPDP32754 393 aaPredicted RBP27.59■■■□□ 2.01
HOXB3-201ENST00000311626 PBKQ96KB5 322 aa27.59■■■□□ 2.01
HOXB3-201ENST00000311626 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.59■■■□□ 2.01
HOXB3-201ENST00000311626 PARVGQ9HBI0 331 aa27.59■■■□□ 2.01
HOXB3-201ENST00000311626 NENFQ9UMX5 172 aa27.59■■■□□ 2.01
HOXB3-201ENST00000311626 PGRMC1O00264 195 aaKnown RBP27.58■■■□□ 2.01
HOXB3-201ENST00000311626 GAS7O60861 476 aa27.58■■■□□ 2.01
HOXB3-201ENST00000311626 PSMD10O75832 226 aa27.58■■■□□ 2.01
HOXB3-201ENST00000311626 STAT1P42224 750 aa27.58■■■□□ 2.01
HOXB3-201ENST00000311626 FMO5P49326 533 aa27.58■■■□□ 2.01
HOXB3-201ENST00000311626 STAT2P52630 851 aa27.58■■■□□ 2.01
HOXB3-201ENST00000311626 PRPF4BQ13523 1007 aaKnown RBP27.58■■■□□ 2.01
HOXB3-201ENST00000311626 VPS36Q86VN1 386 aa27.58■■■□□ 2.01
HOXB3-201ENST00000311626 PPP1R9AQ9ULJ8 1098 aa27.58■■■□□ 2.01
HOXB3-201ENST00000311626 DAPK3O43293 454 aa27.58■■■□□ 2.01
HOXB3-201ENST00000311626 BUB1BO60566 1050 aaPredicted RBP27.58■■■□□ 2.01
HOXB3-201ENST00000311626 ODR4Q5SWX8 454 aa27.58■■■□□ 2.01
HOXB3-201ENST00000311626 NT5DC3Q86UY8 548 aa27.58■■■□□ 2.01
HOXB3-201ENST00000311626 CDAN1Q8IWY9 1227 aa27.58■■■□□ 2.01
HOXB3-201ENST00000311626 FAM178BQ8IXR5 827 aa27.58■■■□□ 2.01
HOXB3-201ENST00000311626 FIZ1Q96SL8 496 aa27.58■■■□□ 2.01
HOXB3-201ENST00000311626 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.58■■■□□ 2.01
HOXB3-201ENST00000311626 DPH5Q9H2P9 285 aa27.58■■■□□ 2.01
HOXB3-201ENST00000311626 PCIF1Q9H4Z3 704 aa27.58■■■□□ 2.01
HOXB3-201ENST00000311626 OLFML3Q9NRN5 406 aa27.58■■■□□ 2.01
HOXB3-201ENST00000311626 CHORDC1Q9UHD1 332 aaPredicted RBP27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms