RNA–Protein interactions for RNA: ENST00000310260.7

VANGL1-201, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-201ENST00000310260 MCM3APO60318 1980 aa13.95□□□□□ -0.18
VANGL1-201ENST00000310260 TARSL2A2RTX5 802 aaKnown RBP13.95□□□□□ -0.18
VANGL1-201ENST00000310260 GOLGA6CA6NDK9 693 aa13.95□□□□□ -0.18
VANGL1-201ENST00000310260 EIF3HO15372 352 aaKnown RBP eCLIP13.95□□□□□ -0.18
VANGL1-201ENST00000310260 INHAP05111 366 aa13.95□□□□□ -0.18
VANGL1-201ENST00000310260 GOLGA6DP0CG33 693 aa13.95□□□□□ -0.18
VANGL1-201ENST00000310260 ARP10275 920 aa13.95□□□□□ -0.18
VANGL1-201ENST00000310260 USP11P51784 963 aa13.95□□□□□ -0.18
VANGL1-201ENST00000310260 SP4Q02446 784 aa13.95□□□□□ -0.18
VANGL1-201ENST00000310260 IRF5Q13568 498 aa13.95□□□□□ -0.18
VANGL1-201ENST00000310260 MTMR1Q13613 665 aa13.95□□□□□ -0.18
VANGL1-201ENST00000310260 LY6KQ17RY6 165 aa13.95□□□□□ -0.18
VANGL1-201ENST00000310260 GJC2Q5T442 439 aaPredicted RBP13.95□□□□□ -0.18
VANGL1-201ENST00000310260 CDKAL1Q5VV42 579 aa13.95□□□□□ -0.18
VANGL1-201ENST00000310260 OLFML2BQ68BL8 750 aa13.95□□□□□ -0.18
VANGL1-201ENST00000310260 MAMDC4Q6UXC1 1216 aa13.95□□□□□ -0.18
VANGL1-201ENST00000310260 GSPT2Q8IYD1 628 aaKnown RBP13.95□□□□□ -0.18
VANGL1-201ENST00000310260 BANK1Q8NDB2 785 aa13.95□□□□□ -0.18
VANGL1-201ENST00000310260 GDAP1L1Q96MZ0 367 aa13.95□□□□□ -0.18
VANGL1-201ENST00000310260 SELENOOQ9BVL4 669 aa13.95□□□□□ -0.18
VANGL1-201ENST00000310260 MAF1Q9H063 256 aa13.95□□□□□ -0.18
VANGL1-201ENST00000310260 GOLGA6AQ9NYA3 693 aa13.95□□□□□ -0.18
VANGL1-201ENST00000310260 SUFUQ9UMX1 484 aa13.95□□□□□ -0.18
VANGL1-201ENST00000310260 SLC37A4O43826 429 aa13.94□□□□□ -0.18
VANGL1-201ENST00000310260 RGS20O76081 388 aa13.94□□□□□ -0.18
VANGL1-201ENST00000310260 MYBL2P10244 700 aa13.94□□□□□ -0.18
VANGL1-201ENST00000310260 EDNRBP24530 442 aa13.94□□□□□ -0.18
VANGL1-201ENST00000310260 ADCYAP1R1P41586 468 aa13.94□□□□□ -0.18
VANGL1-201ENST00000310260 PRMT2P55345 433 aa13.94□□□□□ -0.18
VANGL1-201ENST00000310260 GRIN1Q05586 938 aa13.94□□□□□ -0.18
VANGL1-201ENST00000310260 PPFIA1Q13136 1202 aa13.94□□□□□ -0.18
VANGL1-201ENST00000310260 SPATA20Q8TB22 786 aa13.94□□□□□ -0.18
VANGL1-201ENST00000310260 LENG1Q96BZ8 264 aaPredicted RBP13.94□□□□□ -0.18
VANGL1-201ENST00000310260 MXRA8Q9BRK3 442 aa13.94□□□□□ -0.18
VANGL1-201ENST00000310260 ABHD16BQ9H3Z7 469 aa13.94□□□□□ -0.18
VANGL1-201ENST00000310260 SERTAD1Q9UHV2 236 aa13.94□□□□□ -0.18
VANGL1-201ENST00000310260 DDX39AO00148 427 aaKnown RBP13.94□□□□□ -0.18
VANGL1-201ENST00000310260 HMGCRP04035 888 aa13.94□□□□□ -0.18
VANGL1-201ENST00000310260 CCND3P30281 292 aaPredicted RBP13.94□□□□□ -0.18
VANGL1-201ENST00000310260 EP400NLQ6ZTU2 488 aa13.94□□□□□ -0.18
VANGL1-201ENST00000310260 TMTC1Q8IUR5 882 aa13.94□□□□□ -0.18
VANGL1-201ENST00000310260 SLAIN1Q8ND83 568 aa13.94□□□□□ -0.18
VANGL1-201ENST00000310260 BCAS4Q8TDM0 211 aa13.94□□□□□ -0.18
VANGL1-201ENST00000310260 MMS19Q96T76 1030 aa13.94□□□□□ -0.18
VANGL1-201ENST00000310260 CRACR2AQ9BSW2 395 aa13.94□□□□□ -0.18
VANGL1-201ENST00000310260 BCAS3Q9H6U6 928 aa13.94□□□□□ -0.18
VANGL1-201ENST00000310260 ABHD10Q9NUJ1 306 aa13.94□□□□□ -0.18
VANGL1-201ENST00000310260 SYNGAP1Q96PV0 1343 aa13.94□□□□□ -0.18
VANGL1-201ENST00000310260 BRCA2P51587 3418 aa13.93□□□□□ -0.18
VANGL1-201ENST00000310260 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.93□□□□□ -0.18
VANGL1-201ENST00000310260 POLR2DO15514 142 aaKnown RBP13.93□□□□□ -0.18
VANGL1-201ENST00000310260 CYP3A4P08684 503 aa13.93□□□□□ -0.18
VANGL1-201ENST00000310260 TXNP10599 105 aaKnown RBP13.93□□□□□ -0.18
VANGL1-201ENST00000310260 GNPTABQ3T906 1256 aa13.93□□□□□ -0.18
VANGL1-201ENST00000310260 NLRX1Q86UT6 975 aa13.93□□□□□ -0.18
VANGL1-201ENST00000310260 TRPV1Q8NER1 839 aa13.93□□□□□ -0.18
VANGL1-201ENST00000310260 CRYGNQ8WXF5 182 aa13.93□□□□□ -0.18
VANGL1-201ENST00000310260 COPS5Q92905 334 aa13.93□□□□□ -0.18
VANGL1-201ENST00000310260 CAPS2Q9BXY5 557 aa13.93□□□□□ -0.18
VANGL1-201ENST00000310260 KCNH7Q9NS40 1196 aa13.93□□□□□ -0.18
VANGL1-201ENST00000310260 UBIAD1Q9Y5Z9 338 aa13.93□□□□□ -0.18
VANGL1-201ENST00000310260 FRMPD4Q14CM0 1322 aa13.93□□□□□ -0.18
VANGL1-201ENST00000310260 PLXNA1Q9UIW2 1896 aa13.93□□□□□ -0.18
VANGL1-201ENST00000310260 LCTP09848 1927 aa13.93□□□□□ -0.18
VANGL1-201ENST00000310260 ACTN4O43707 911 aaKnown RBP13.93□□□□□ -0.18
VANGL1-201ENST00000310260 RILPL1Q5EBL4 403 aa13.93□□□□□ -0.18
VANGL1-201ENST00000310260 SPATA1Q5VX52 437 aa13.93□□□□□ -0.18
VANGL1-201ENST00000310260 XRRA1Q6P2D8 792 aa13.93□□□□□ -0.18
VANGL1-201ENST00000310260 RPAINQ86UA6 219 aa13.93□□□□□ -0.18
VANGL1-201ENST00000310260 JADE2Q9NQC1 790 aa13.93□□□□□ -0.18
VANGL1-201ENST00000310260 HDAC6Q9UBN7 1215 aa13.93□□□□□ -0.18
VANGL1-201ENST00000310260 TRIM10Q9UDY6 481 aa13.93□□□□□ -0.18
VANGL1-201ENST00000310260 FBXO2Q9UK22 296 aaPredicted RBP13.93□□□□□ -0.18
VANGL1-201ENST00000310260 REXO2Q9Y3B8 237 aaKnown RBP13.93□□□□□ -0.18
VANGL1-201ENST00000310260 MYH7BA7E2Y1 1941 aa13.92□□□□□ -0.18
VANGL1-201ENST00000310260 GOLGA6BA6NDN3 693 aa13.92□□□□□ -0.18
VANGL1-201ENST00000310260 MEIS1O00470 390 aa13.92□□□□□ -0.18
VANGL1-201ENST00000310260 ATP9AO75110 1047 aa13.92□□□□□ -0.18
VANGL1-201ENST00000310260 ZMYND10O75800 440 aa13.92□□□□□ -0.18
VANGL1-201ENST00000310260 ARIH2O95376 493 aa13.92□□□□□ -0.18
VANGL1-201ENST00000310260 FNTAP49354 379 aa13.92□□□□□ -0.18
VANGL1-201ENST00000310260 SP2Q02086 613 aa13.92□□□□□ -0.18
VANGL1-201ENST00000310260 CUL4BQ13620 913 aa13.92□□□□□ -0.18
VANGL1-201ENST00000310260 TAPT1Q6NXT6 567 aa13.92□□□□□ -0.18
VANGL1-201ENST00000310260 PXYLP1Q8TE99 480 aa13.92□□□□□ -0.18
VANGL1-201ENST00000310260 INPP4AQ96PE3 977 aaPredicted RBP13.92□□□□□ -0.18
VANGL1-201ENST00000310260 ZNF577Q9BSK1 485 aa13.92□□□□□ -0.18
VANGL1-201ENST00000310260 VTA1Q9NP79 307 aa13.92□□□□□ -0.18
VANGL1-201ENST00000310260 RBBP6Q7Z6E9 1792 aaKnown RBP13.92□□□□□ -0.18
VANGL1-201ENST00000310260 ZNF865P0CJ78 1059 aaPredicted RBP13.92□□□□□ -0.18
VANGL1-201ENST00000310260 CD44P16070 742 aaKnown RBP13.92□□□□□ -0.18
VANGL1-201ENST00000310260 TXKP42681 527 aa13.92□□□□□ -0.18
VANGL1-201ENST00000310260 GNGT1P63211 74 aa13.92□□□□□ -0.18
VANGL1-201ENST00000310260 TNFAIP2Q03169 654 aa13.92□□□□□ -0.18
VANGL1-201ENST00000310260 PTGDRQ13258 359 aa13.92□□□□□ -0.18
VANGL1-201ENST00000310260 MTFR1Q15390 333 aa13.92□□□□□ -0.18
VANGL1-201ENST00000310260 CALCRLQ16602 461 aa13.92□□□□□ -0.18
VANGL1-201ENST00000310260 FBXO46Q6PJ61 603 aaPredicted RBP13.92□□□□□ -0.18
VANGL1-201ENST00000310260 CYP26C1Q6V0L0 522 aa13.92□□□□□ -0.18
VANGL1-201ENST00000310260 GBP6Q6ZN66 633 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms