RNA–Protein interactions for RNA: ENST00000309859.8

GGA2-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA2, Length 5,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-201ENST00000309859 GPCPD1Q9NPB8 672 aa11.66□□□□□ -0.54
GGA2-201ENST00000309859 NCALDP61601 193 aa11.66□□□□□ -0.54
GGA2-201ENST00000309859 SPARCL1Q14515 664 aa11.66□□□□□ -0.54
GGA2-201ENST00000309859 TAF1BQ53T94 588 aaPredicted RBP11.66□□□□□ -0.54
GGA2-201ENST00000309859 WDR59Q6PJI9 974 aa11.66□□□□□ -0.54
GGA2-201ENST00000309859 AGGF1Q8N302 714 aaeCLIP11.66□□□□□ -0.54
GGA2-201ENST00000309859 LCORLQ8N3X6 602 aa11.66□□□□□ -0.54
GGA2-201ENST00000309859 RBM41Q96IZ5 413 aaKnown RBP11.66□□□□□ -0.54
GGA2-201ENST00000309859 SPZ1Q9BXG8 430 aa11.66□□□□□ -0.54
GGA2-201ENST00000309859 TMEM60Q9H2L4 133 aa11.66□□□□□ -0.54
GGA2-201ENST00000309859 PLCH2O75038 1416 aa11.65□□□□□ -0.54
GGA2-201ENST00000309859 F8VZ95 297 aa11.65□□□□□ -0.54
GGA2-201ENST00000309859 XPO1O14980 1071 aaKnown RBP11.65□□□□□ -0.54
GGA2-201ENST00000309859 NONOQ15233 471 aaKnown RBP eCLIP11.65□□□□□ -0.54
GGA2-201ENST00000309859 KYNUQ16719 465 aa11.65□□□□□ -0.54
GGA2-201ENST00000309859 FAM26FQ5R3K3 315 aa11.65□□□□□ -0.54
GGA2-201ENST00000309859 C10orf76Q5T2E6 689 aa11.65□□□□□ -0.54
GGA2-201ENST00000309859 CCDC137Q6PK04 289 aaKnown RBP11.65□□□□□ -0.54
GGA2-201ENST00000309859 NPHP4O75161 1426 aaPredicted RBP11.65□□□□□ -0.54
GGA2-201ENST00000309859 ZBED4O75132 1171 aa11.65□□□□□ -0.54
GGA2-201ENST00000309859 KRT10P13645 584 aa11.65□□□□□ -0.54
GGA2-201ENST00000309859 GRIK3Q13003 919 aa11.65□□□□□ -0.54
GGA2-201ENST00000309859 BLMHQ13867 455 aa11.65□□□□□ -0.54
GGA2-201ENST00000309859 PHF12Q96QT6 1004 aa11.65□□□□□ -0.54
GGA2-201ENST00000309859 MYLK2Q9H1R3 596 aa11.65□□□□□ -0.54
GGA2-201ENST00000309859 PKD2L1Q9P0L9 805 aa11.65□□□□□ -0.54
GGA2-201ENST00000309859 ANAPC4Q9UJX5 808 aa11.65□□□□□ -0.54
GGA2-201ENST00000309859 ARHGEF10O15013 1369 aa11.65□□□□□ -0.54
GGA2-201ENST00000309859 USP17L12C9JPN9 530 aa11.65□□□□□ -0.54
GGA2-201ENST00000309859 USP17L21D6R901 530 aa11.65□□□□□ -0.54
GGA2-201ENST00000309859 AGTP01019 485 aa11.65□□□□□ -0.54
GGA2-201ENST00000309859 PICALMQ13492 652 aa11.65□□□□□ -0.54
GGA2-201ENST00000309859 PALM2Q8IXS6 379 aa11.65□□□□□ -0.54
GGA2-201ENST00000309859 MSL3Q8N5Y2 521 aaKnown RBP11.65□□□□□ -0.54
GGA2-201ENST00000309859 CCT6BQ92526 530 aa11.65□□□□□ -0.54
GGA2-201ENST00000309859 SAYSD1Q9NPB0 183 aa11.65□□□□□ -0.54
GGA2-201ENST00000309859 GCNT4Q9P109 453 aa11.65□□□□□ -0.54
GGA2-201ENST00000309859 H3BRJ5 948 aa11.65□□□□□ -0.54
GGA2-201ENST00000309859 LSM1O15116 133 aaKnown RBP11.65□□□□□ -0.54
GGA2-201ENST00000309859 GSTA1P08263 222 aa11.65□□□□□ -0.54
GGA2-201ENST00000309859 CCNFP41002 786 aa11.65□□□□□ -0.54
GGA2-201ENST00000309859 PEX5P50542 639 aa11.65□□□□□ -0.54
GGA2-201ENST00000309859 SH3BGRP55822 239 aaPredicted RBP11.65□□□□□ -0.54
GGA2-201ENST00000309859 FBXO25Q8TCJ0 367 aa11.65□□□□□ -0.54
GGA2-201ENST00000309859 C18orf8Q96DM3 657 aa11.65□□□□□ -0.54
GGA2-201ENST00000309859 GDF3Q9NR23 364 aa11.65□□□□□ -0.54
GGA2-201ENST00000309859 HDAC9Q9UKV0 1011 aa11.65□□□□□ -0.54
GGA2-201ENST00000309859 A0A087X0T9 212 aa11.64□□□□□ -0.55
GGA2-201ENST00000309859 SMCO2A6NFE2 343 aa11.64□□□□□ -0.55
GGA2-201ENST00000309859 MGRN1O60291 552 aa11.64□□□□□ -0.55
GGA2-201ENST00000309859 FAM228BP0C875 321 aa11.64□□□□□ -0.55
GGA2-201ENST00000309859 MED21Q13503 144 aa11.64□□□□□ -0.55
GGA2-201ENST00000309859 SYCP2LQ5T4T6 812 aa11.64□□□□□ -0.55
GGA2-201ENST00000309859 STK32AQ8WU08 396 aa11.64□□□□□ -0.55
GGA2-201ENST00000309859 MPHOSPH6Q99547 160 aaKnown RBP11.64□□□□□ -0.55
GGA2-201ENST00000309859 PDS5AQ29RF7 1337 aaKnown RBP11.64□□□□□ -0.55
GGA2-201ENST00000309859 TMCC1O94876 653 aa11.64□□□□□ -0.55
GGA2-201ENST00000309859 MDM2Q00987 491 aaPredicted RBP11.64□□□□□ -0.55
GGA2-201ENST00000309859 KIAA1755Q5JYT7 1200 aa11.64□□□□□ -0.55
GGA2-201ENST00000309859 GLYCTKQ8IVS8 523 aa11.64□□□□□ -0.55
GGA2-201ENST00000309859 NUF2Q9BZD4 464 aa11.64□□□□□ -0.55
GGA2-201ENST00000309859 ZNF148Q9UQR1 794 aa11.64□□□□□ -0.55
GGA2-201ENST00000309859 PGM3O95394 542 aa11.64□□□□□ -0.55
GGA2-201ENST00000309859 PPP1R2P41236 205 aa11.64□□□□□ -0.55
GGA2-201ENST00000309859 PCYT1AP49585 367 aa11.64□□□□□ -0.55
GGA2-201ENST00000309859 TPD52P55327 224 aaPredicted RBP11.64□□□□□ -0.55
GGA2-201ENST00000309859 AP2B1P63010 937 aa11.64□□□□□ -0.55
GGA2-201ENST00000309859 TMEM132AQ24JP5 1023 aa11.64□□□□□ -0.55
GGA2-201ENST00000309859 RABGAP1LQ5R372 815 aa11.64□□□□□ -0.55
GGA2-201ENST00000309859 FAM228AQ86W67 206 aa11.64□□□□□ -0.55
GGA2-201ENST00000309859 DNAJC1Q96KC8 554 aaKnown RBP11.64□□□□□ -0.55
GGA2-201ENST00000309859 PCDHGC5Q9Y5F6 944 aa11.64□□□□□ -0.55
GGA2-201ENST00000309859 MEIS1O00470 390 aa11.64□□□□□ -0.55
GGA2-201ENST00000309859 NCF2P19878 526 aaPredicted RBP11.64□□□□□ -0.55
GGA2-201ENST00000309859 PIK3CAP42336 1068 aa11.64□□□□□ -0.55
GGA2-201ENST00000309859 USP46P62068 366 aa11.64□□□□□ -0.55
GGA2-201ENST00000309859 DPH6Q7L8W6 267 aa11.64□□□□□ -0.55
GGA2-201ENST00000309859 GALNT4Q8N4A0 578 aa11.64□□□□□ -0.55
GGA2-201ENST00000309859 ADAM22Q9P0K1 906 aa11.64□□□□□ -0.55
GGA2-201ENST00000309859 ABCC3O15438 1527 aa11.64□□□□□ -0.55
GGA2-201ENST00000309859 AATKQ6ZMQ8 1374 aa11.64□□□□□ -0.55
GGA2-201ENST00000309859 ZBBXA8MT70 800 aa11.64□□□□□ -0.55
GGA2-201ENST00000309859 ATP5HO75947 161 aa11.64□□□□□ -0.55
GGA2-201ENST00000309859 POTEJP0CG39 1038 aa11.64□□□□□ -0.55
GGA2-201ENST00000309859 ATICP31939 592 aa11.64□□□□□ -0.55
GGA2-201ENST00000309859 ALDH18A1P54886 795 aaKnown RBP11.64□□□□□ -0.55
GGA2-201ENST00000309859 TXNRD1Q16881 649 aa11.64□□□□□ -0.55
GGA2-201ENST00000309859 EARS2Q5JPH6 523 aaKnown RBP11.64□□□□□ -0.55
GGA2-201ENST00000309859 MTDHQ86UE4 582 aaKnown RBP11.64□□□□□ -0.55
GGA2-201ENST00000309859 LARP4BQ92615 738 aaKnown RBP11.64□□□□□ -0.55
GGA2-201ENST00000309859 DNAAF2Q9NVR5 837 aaKnown RBP11.64□□□□□ -0.55
GGA2-201ENST00000309859 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.63□□□□□ -0.55
GGA2-201ENST00000309859 CALB2P22676 271 aa11.63□□□□□ -0.55
GGA2-201ENST00000309859 ADD2P35612 726 aa11.63□□□□□ -0.55
GGA2-201ENST00000309859 TRIM50Q86XT4 487 aa11.63□□□□□ -0.55
GGA2-201ENST00000309859 RBBP8NLQ8NC74 664 aaPredicted RBP11.63□□□□□ -0.55
GGA2-201ENST00000309859 CNBD2Q96M20 576 aa11.63□□□□□ -0.55
GGA2-201ENST00000309859 RNF26Q9BY78 433 aaPredicted RBP11.63□□□□□ -0.55
GGA2-201ENST00000309859 CRNKL1Q9BZJ0 848 aaKnown RBP11.63□□□□□ -0.55
GGA2-201ENST00000309859 AGTPBP1Q9UPW5 1226 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms