RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 EMC2Q15006 297 aa19.92■□□□□ 0.78
SSSCA1-201ENST00000309328 KARSQ15046 597 aaKnown RBP19.92■□□□□ 0.78
SSSCA1-201ENST00000309328 ECM1Q16610 540 aa19.92■□□□□ 0.78
SSSCA1-201ENST00000309328 EFCAB12Q6NXP0 572 aa19.92■□□□□ 0.78
SSSCA1-201ENST00000309328 IQUBQ8NA54 791 aa19.92■□□□□ 0.78
SSSCA1-201ENST00000309328 TRAPPC12Q8WVT3 735 aa19.92■□□□□ 0.78
SSSCA1-201ENST00000309328 PNMA5Q96PV4 448 aa19.92■□□□□ 0.78
SSSCA1-201ENST00000309328 MTRQ99707 1265 aa19.92■□□□□ 0.78
SSSCA1-201ENST00000309328 LRRC27Q9C0I9 530 aa19.92■□□□□ 0.78
SSSCA1-201ENST00000309328 KCNG1Q9UIX4 513 aa19.92■□□□□ 0.78
SSSCA1-201ENST00000309328 ASAP2O43150 1006 aa19.91■□□□□ 0.78
SSSCA1-201ENST00000309328 CKBP12277 381 aa19.91■□□□□ 0.78
SSSCA1-201ENST00000309328 THPOP40225 353 aa19.91■□□□□ 0.78
SSSCA1-201ENST00000309328 MXD4Q14582 209 aaPredicted RBP19.91■□□□□ 0.78
SSSCA1-201ENST00000309328 TRIM71Q2Q1W2 868 aaKnown RBP19.91■□□□□ 0.78
SSSCA1-201ENST00000309328 SPECC1Q5M775 1068 aa19.91■□□□□ 0.78
SSSCA1-201ENST00000309328 SHC4Q6S5L8 630 aa19.91■□□□□ 0.78
SSSCA1-201ENST00000309328 PADI6Q6TGC4 694 aa19.91■□□□□ 0.78
SSSCA1-201ENST00000309328 TMEM199Q8N511 208 aa19.91■□□□□ 0.78
SSSCA1-201ENST00000309328 LINC01465Q8N7H1 131 aa19.91■□□□□ 0.78
SSSCA1-201ENST00000309328 SYT2Q8N9I0 419 aaPredicted RBP19.91■□□□□ 0.78
SSSCA1-201ENST00000309328 TMEM87AQ8NBN3 555 aa19.91■□□□□ 0.78
SSSCA1-201ENST00000309328 PSPC1Q8WXF1 523 aaKnown RBP19.91■□□□□ 0.78
SSSCA1-201ENST00000309328 LARP4BQ92615 738 aaKnown RBP19.91■□□□□ 0.78
SSSCA1-201ENST00000309328 CCDC34Q96HJ3 373 aa19.91■□□□□ 0.78
SSSCA1-201ENST00000309328 GBP4Q96PP9 640 aa19.91■□□□□ 0.78
SSSCA1-201ENST00000309328 LBHD1Q9BQE6 289 aaPredicted RBP19.91■□□□□ 0.78
SSSCA1-201ENST00000309328 USP25Q9UHP3 1055 aa19.91■□□□□ 0.78
SSSCA1-201ENST00000309328 SQORQ9Y6N5 450 aa19.91■□□□□ 0.78
SSSCA1-201ENST00000309328 PFKMP08237 780 aa19.9■□□□□ 0.78
SSSCA1-201ENST00000309328 PLA2G4BP0C869 781 aa19.9■□□□□ 0.78
SSSCA1-201ENST00000309328 CYP11B2P19099 503 aa19.9■□□□□ 0.78
SSSCA1-201ENST00000309328 STAT6P42226 847 aa19.9■□□□□ 0.78
SSSCA1-201ENST00000309328 FAM26DQ5JW98 314 aa19.9■□□□□ 0.78
SSSCA1-201ENST00000309328 MFSD5Q6N075 450 aa19.9■□□□□ 0.78
SSSCA1-201ENST00000309328 KIAA0319LQ8IZA0 1049 aa19.9■□□□□ 0.78
SSSCA1-201ENST00000309328 USP38Q8NB14 1042 aa19.9■□□□□ 0.78
SSSCA1-201ENST00000309328 PPP1R13LQ8WUF5 828 aa19.9■□□□□ 0.78
SSSCA1-201ENST00000309328 DNAJB3Q8WWF6 145 aa19.9■□□□□ 0.78
SSSCA1-201ENST00000309328 DHX38Q92620 1227 aaKnown RBP19.9■□□□□ 0.78
SSSCA1-201ENST00000309328 RAD54LQ92698 747 aa19.9■□□□□ 0.78
SSSCA1-201ENST00000309328 SUGCTQ9HAC7 445 aa19.9■□□□□ 0.78
SSSCA1-201ENST00000309328 FAM237AA0A1B0GTK4 181 aa19.89■□□□□ 0.77
SSSCA1-201ENST00000309328 TMEM150BA6NC51 233 aa19.89■□□□□ 0.77
SSSCA1-201ENST00000309328 TRIM43BA6NCK2 446 aa19.89■□□□□ 0.77
SSSCA1-201ENST00000309328 ZBTB39O15060 712 aa19.89■□□□□ 0.77
SSSCA1-201ENST00000309328 GUCY2CP25092 1073 aa19.89■□□□□ 0.77
SSSCA1-201ENST00000309328 MRPS6P82932 125 aaKnown RBP19.89■□□□□ 0.77
SSSCA1-201ENST00000309328 AMPD3Q01432 767 aa19.89■□□□□ 0.77
SSSCA1-201ENST00000309328 ODR4Q5SWX8 454 aa19.89■□□□□ 0.77
SSSCA1-201ENST00000309328 RUFY4Q6ZNE9 571 aa19.89■□□□□ 0.77
SSSCA1-201ENST00000309328 USP49Q70CQ1 688 aa19.89■□□□□ 0.77
SSSCA1-201ENST00000309328 LRRC8DQ7L1W4 858 aa19.89■□□□□ 0.77
SSSCA1-201ENST00000309328 ZNF410Q86VK4 478 aa19.89■□□□□ 0.77
SSSCA1-201ENST00000309328 MRPS27Q92552 414 aaKnown RBP19.89■□□□□ 0.77
SSSCA1-201ENST00000309328 KIFAP3Q92845 792 aa19.89■□□□□ 0.77
SSSCA1-201ENST00000309328 TRIM43Q96BQ3 446 aaPredicted RBP19.89■□□□□ 0.77
SSSCA1-201ENST00000309328 FAM49AQ9H0Q0 323 aaPredicted RBP19.89■□□□□ 0.77
SSSCA1-201ENST00000309328 C17orf75Q9HAS0 396 aa19.89■□□□□ 0.77
SSSCA1-201ENST00000309328 BMP2KQ9NSY1 1161 aaPredicted RBP19.89■□□□□ 0.77
SSSCA1-201ENST00000309328 KCNH3Q9ULD8 1083 aa19.89■□□□□ 0.77
SSSCA1-201ENST00000309328 AKT3Q9Y243 479 aa19.89■□□□□ 0.77
SSSCA1-201ENST00000309328 RSPH10B2B2RC85 870 aa19.88■□□□□ 0.77
SSSCA1-201ENST00000309328 E9PMD0 336 aa19.88■□□□□ 0.77
SSSCA1-201ENST00000309328 USO1O60763 962 aaKnown RBP19.88■□□□□ 0.77
SSSCA1-201ENST00000309328 RSPH10BP0C881 870 aa19.88■□□□□ 0.77
SSSCA1-201ENST00000309328 CLCN3P51790 818 aa19.88■□□□□ 0.77
SSSCA1-201ENST00000309328 SLC12A3P55017 1021 aa19.88■□□□□ 0.77
SSSCA1-201ENST00000309328 PPP2R5AQ15172 486 aa19.88■□□□□ 0.77
SSSCA1-201ENST00000309328 SV2BQ7L1I2 683 aa19.88■□□□□ 0.77
SSSCA1-201ENST00000309328 RPUSD2Q8IZ73 545 aaKnown RBP19.88■□□□□ 0.77
SSSCA1-201ENST00000309328 DRC1Q96MC2 740 aa19.88■□□□□ 0.77
SSSCA1-201ENST00000309328 SUCLA2Q9P2R7 463 aaPredicted RBP19.88■□□□□ 0.77
SSSCA1-201ENST00000309328 TRPV2Q9Y5S1 764 aa19.88■□□□□ 0.77
SSSCA1-201ENST00000309328 GOLGA6L22H0YM25 854 aa19.87■□□□□ 0.77
SSSCA1-201ENST00000309328 IQCF3P0C7M6 154 aa19.87■□□□□ 0.77
SSSCA1-201ENST00000309328 SCP2P22307 547 aa19.87■□□□□ 0.77
SSSCA1-201ENST00000309328 POU5F1BQ06416 359 aa19.87■□□□□ 0.77
SSSCA1-201ENST00000309328 PPIGQ13427 754 aaKnown RBP eCLIP19.87■□□□□ 0.77
SSSCA1-201ENST00000309328 TFDP1Q14186 410 aa19.87■□□□□ 0.77
SSSCA1-201ENST00000309328 SH3RF1Q7Z6J0 888 aa19.87■□□□□ 0.77
SSSCA1-201ENST00000309328 LRRC71Q8N4P6 559 aa19.87■□□□□ 0.77
SSSCA1-201ENST00000309328 SH2D3AQ9BRG2 576 aa19.87■□□□□ 0.77
SSSCA1-201ENST00000309328 PPP1R12CQ9BZL4 782 aa19.87■□□□□ 0.77
SSSCA1-201ENST00000309328 TNMDQ9H2S6 317 aa19.87■□□□□ 0.77
SSSCA1-201ENST00000309328 GDPD2Q9HCC8 539 aa19.87■□□□□ 0.77
SSSCA1-201ENST00000309328 BLOC1S4Q9NUP1 217 aa19.87■□□□□ 0.77
SSSCA1-201ENST00000309328 ODF2LQ9ULJ1 636 aa19.87■□□□□ 0.77
SSSCA1-201ENST00000309328 COL4A3BPQ9Y5P4 624 aa19.87■□□□□ 0.77
SSSCA1-201ENST00000309328 KAT6AQ92794 2004 aa19.86■□□□□ 0.77
SSSCA1-201ENST00000309328 PHLPP2Q6ZVD8 1323 aa19.86■□□□□ 0.77
SSSCA1-201ENST00000309328 SSBP05455 408 aaKnown RBP eCLIP19.86■□□□□ 0.77
SSSCA1-201ENST00000309328 CRYBB1P53674 252 aaPredicted RBP19.86■□□□□ 0.77
SSSCA1-201ENST00000309328 PCBP1Q15365 356 aaKnown RBP eCLIP19.86■□□□□ 0.77
SSSCA1-201ENST00000309328 ZNF618Q5T7W0 954 aa19.86■□□□□ 0.77
SSSCA1-201ENST00000309328 RINT1Q6NUQ1 792 aa19.86■□□□□ 0.77
SSSCA1-201ENST00000309328 C1orf186Q6ZWK4 172 aa19.86■□□□□ 0.77
SSSCA1-201ENST00000309328 KCNK18Q7Z418 384 aa19.86■□□□□ 0.77
SSSCA1-201ENST00000309328 CEP57L1Q8IYX8 460 aa19.86■□□□□ 0.77
SSSCA1-201ENST00000309328 FSIP1Q8NA03 581 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms