RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 ITGB5P18084 799 aa13.57□□□□□ -0.24
SMIM4-201ENST00000307106 MTMR1Q13613 665 aa13.57□□□□□ -0.24
SMIM4-201ENST00000307106 IMMTQ16891 758 aaKnown RBP13.57□□□□□ -0.24
SMIM4-201ENST00000307106 MTHFD1LQ6UB35 978 aa13.57□□□□□ -0.24
SMIM4-201ENST00000307106 LRRC43Q8N309 656 aa13.57□□□□□ -0.24
SMIM4-201ENST00000307106 PIBF1Q8WXW3 757 aa13.57□□□□□ -0.24
SMIM4-201ENST00000307106 RUBCNQ92622 972 aa13.57□□□□□ -0.24
SMIM4-201ENST00000307106 CDHR5Q9HBB8 845 aa13.57□□□□□ -0.24
SMIM4-201ENST00000307106 DZANK1Q9NVP4 752 aa13.57□□□□□ -0.24
SMIM4-201ENST00000307106 PCDHB15Q9Y5E8 787 aa13.57□□□□□ -0.24
SMIM4-201ENST00000307106 SPTBN2O15020 2390 aa13.57□□□□□ -0.24
SMIM4-201ENST00000307106 PIK3CDO00329 1044 aa13.56□□□□□ -0.24
SMIM4-201ENST00000307106 STK25O00506 426 aa13.56□□□□□ -0.24
SMIM4-201ENST00000307106 MEIS2O14770 477 aa13.56□□□□□ -0.24
SMIM4-201ENST00000307106 FAM189BP81408 668 aa13.56□□□□□ -0.24
SMIM4-201ENST00000307106 RSPO4Q2I0M5 234 aaPredicted RBP13.56□□□□□ -0.24
SMIM4-201ENST00000307106 ANKRD45Q5TZF3 282 aa13.56□□□□□ -0.24
SMIM4-201ENST00000307106 ZC3H14Q6PJT7 736 aaKnown RBP13.56□□□□□ -0.24
SMIM4-201ENST00000307106 ABI1Q8IZP0 508 aa13.56□□□□□ -0.24
SMIM4-201ENST00000307106 DCLK2Q8N568 766 aa13.56□□□□□ -0.24
SMIM4-201ENST00000307106 RIN2Q8WYP3 895 aaPredicted RBP13.56□□□□□ -0.24
SMIM4-201ENST00000307106 RILPL2Q969X0 211 aa13.56□□□□□ -0.24
SMIM4-201ENST00000307106 CASD1Q96PB1 797 aa13.56□□□□□ -0.24
SMIM4-201ENST00000307106 JPH1Q9HDC5 661 aaPredicted RBP13.56□□□□□ -0.24
SMIM4-201ENST00000307106 HOXA2O43364 376 aa13.55□□□□□ -0.24
SMIM4-201ENST00000307106 EPCAMP16422 314 aa13.55□□□□□ -0.24
SMIM4-201ENST00000307106 RFX1P22670 979 aa13.55□□□□□ -0.24
SMIM4-201ENST00000307106 KLRC1P26715 233 aa13.55□□□□□ -0.24
SMIM4-201ENST00000307106 STAT5BP51692 787 aa13.55□□□□□ -0.24
SMIM4-201ENST00000307106 BMS1Q14692 1282 aaKnown RBP13.55□□□□□ -0.24
SMIM4-201ENST00000307106 TMC5Q6UXY8 1006 aa13.55□□□□□ -0.24
SMIM4-201ENST00000307106 CCDC149Q6ZUS6 474 aa13.55□□□□□ -0.24
SMIM4-201ENST00000307106 CYB5R4Q7L1T6 521 aa13.55□□□□□ -0.24
SMIM4-201ENST00000307106 OTOP3Q7RTS5 596 aa13.55□□□□□ -0.24
SMIM4-201ENST00000307106 PLPPR4Q7Z2D5 763 aa13.55□□□□□ -0.24
SMIM4-201ENST00000307106 SLC39A11Q8N1S5 342 aa13.55□□□□□ -0.24
SMIM4-201ENST00000307106 TMEM87AQ8NBN3 555 aa13.55□□□□□ -0.24
SMIM4-201ENST00000307106 FEZF2Q8TBJ5 459 aa13.55□□□□□ -0.24
SMIM4-201ENST00000307106 KCNK12Q9HB15 430 aa13.55□□□□□ -0.24
SMIM4-201ENST00000307106 RNF19AQ9NV58 838 aa13.55□□□□□ -0.24
SMIM4-201ENST00000307106 SLC9A2Q9UBY0 812 aa13.55□□□□□ -0.24
SMIM4-201ENST00000307106 UBIAD1Q9Y5Z9 338 aa13.55□□□□□ -0.24
SMIM4-201ENST00000307106 RALGAPA1Q6GYQ0 2036 aa13.55□□□□□ -0.24
SMIM4-201ENST00000307106 ZFHX4Q86UP3 3567 aa13.55□□□□□ -0.24
SMIM4-201ENST00000307106 CACNA1GO43497 2377 aa13.54□□□□□ -0.24
SMIM4-201ENST00000307106 NARSO43776 548 aaKnown RBP13.54□□□□□ -0.24
SMIM4-201ENST00000307106 CXCL14O95715 111 aa13.54□□□□□ -0.24
SMIM4-201ENST00000307106 SDSP20132 328 aa13.54□□□□□ -0.24
SMIM4-201ENST00000307106 FAM228AQ86W67 206 aa13.54□□□□□ -0.24
SMIM4-201ENST00000307106 PPP1R16BQ96T49 567 aa13.54□□□□□ -0.24
SMIM4-201ENST00000307106 OSMRQ99650 979 aa13.54□□□□□ -0.24
SMIM4-201ENST00000307106 DOCK6Q96HP0 2047 aa13.53□□□□□ -0.24
SMIM4-201ENST00000307106 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.53□□□□□ -0.24
SMIM4-201ENST00000307106 KRBA1A5PL33 1030 aa13.53□□□□□ -0.24
SMIM4-201ENST00000307106 MAFGO15525 162 aa13.53□□□□□ -0.24
SMIM4-201ENST00000307106 CFHP08603 1231 aa13.53□□□□□ -0.24
SMIM4-201ENST00000307106 METAP2P50579 478 aaKnown RBP eCLIP13.53□□□□□ -0.24
SMIM4-201ENST00000307106 ACTR2P61160 394 aa13.53□□□□□ -0.24
SMIM4-201ENST00000307106 DSC3Q14574 896 aa13.53□□□□□ -0.24
SMIM4-201ENST00000307106 CWC27Q6UX04 472 aaKnown RBP13.53□□□□□ -0.24
SMIM4-201ENST00000307106 CABP7Q86V35 215 aa13.53□□□□□ -0.24
SMIM4-201ENST00000307106 KIAA0319LQ8IZA0 1049 aa13.53□□□□□ -0.24
SMIM4-201ENST00000307106 AUTS2Q8WXX7 1259 aa13.53□□□□□ -0.24
SMIM4-201ENST00000307106 DSCC1Q9BVC3 393 aa13.53□□□□□ -0.24
SMIM4-201ENST00000307106 SFXN1Q9H9B4 322 aa13.53□□□□□ -0.24
SMIM4-201ENST00000307106 JADE2Q9NQC1 790 aa13.53□□□□□ -0.24
SMIM4-201ENST00000307106 IGSF9Q9P2J2 1179 aa13.53□□□□□ -0.24
SMIM4-201ENST00000307106 WNT16Q9UBV4 365 aa13.53□□□□□ -0.24
SMIM4-201ENST00000307106 SPDYE4A6NLX3 237 aa13.52□□□□□ -0.25
SMIM4-201ENST00000307106 NT5C1B-RDH14C9J2C7 533 aa13.52□□□□□ -0.25
SMIM4-201ENST00000307106 SP9P0CG40 484 aa13.52□□□□□ -0.25
SMIM4-201ENST00000307106 SLC26A2P50443 739 aa13.52□□□□□ -0.25
SMIM4-201ENST00000307106 CRYBB1P53674 252 aaPredicted RBP13.52□□□□□ -0.25
SMIM4-201ENST00000307106 TBC1D8BQ0IIM8 1120 aa13.52□□□□□ -0.25
SMIM4-201ENST00000307106 TROAPQ12815 778 aa13.52□□□□□ -0.25
SMIM4-201ENST00000307106 KIZQ2M2Z5 673 aa13.52□□□□□ -0.25
SMIM4-201ENST00000307106 CLLU1OSQ5K130 101 aa13.52□□□□□ -0.25
SMIM4-201ENST00000307106 SPECC1Q5M775 1068 aa13.52□□□□□ -0.25
SMIM4-201ENST00000307106 GPR149Q86SP6 731 aa13.52□□□□□ -0.25
SMIM4-201ENST00000307106 VPS52Q8N1B4 723 aa13.52□□□□□ -0.25
SMIM4-201ENST00000307106 SLC22A17Q8WUG5 538 aa13.52□□□□□ -0.25
SMIM4-201ENST00000307106 TMEM169Q96HH4 297 aa13.52□□□□□ -0.25
SMIM4-201ENST00000307106 SDF4Q9BRK5 362 aa13.52□□□□□ -0.25
SMIM4-201ENST00000307106 ZBP1Q9H171 429 aa13.52□□□□□ -0.25
SMIM4-201ENST00000307106 SENP2Q9HC62 589 aa13.52□□□□□ -0.25
SMIM4-201ENST00000307106 CA14Q9ULX7 337 aa13.52□□□□□ -0.25
SMIM4-201ENST00000307106 COL1A2P08123 1366 aa13.51□□□□□ -0.25
SMIM4-201ENST00000307106 NFASCO94856 1347 aa13.51□□□□□ -0.25
SMIM4-201ENST00000307106 ERICH2A1L162 156 aa13.51□□□□□ -0.25
SMIM4-201ENST00000307106 HBP1O60381 514 aa13.51□□□□□ -0.25
SMIM4-201ENST00000307106 ALDH7A1P49419 539 aaKnown RBP13.51□□□□□ -0.25
SMIM4-201ENST00000307106 BCAR1P56945 870 aa13.51□□□□□ -0.25
SMIM4-201ENST00000307106 GIT2Q14161 759 aa13.51□□□□□ -0.25
SMIM4-201ENST00000307106 ST3GAL2Q16842 350 aa13.51□□□□□ -0.25
SMIM4-201ENST00000307106 ECHDC2Q86YB7 292 aa13.51□□□□□ -0.25
SMIM4-201ENST00000307106 SUMF1Q8NBK3 374 aa13.51□□□□□ -0.25
SMIM4-201ENST00000307106 RNF169Q8NCN4 708 aa13.51□□□□□ -0.25
SMIM4-201ENST00000307106 RRP36Q96EU6 259 aaKnown RBP13.51□□□□□ -0.25
SMIM4-201ENST00000307106 TBC1D17Q9HA65 648 aa13.51□□□□□ -0.25
SMIM4-201ENST00000307106 IRAK3Q9Y616 596 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms