RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 GPKOWQ92917 476 aaPredicted RBP eCLIP8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 SECISBP2LQ93073 1101 aaKnown RBP8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 SPATA33Q96N06 139 aa8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 PIGSQ96S52 555 aa8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 PYM1Q9BRP8 204 aaKnown RBP8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 VPS54Q9P1Q0 977 aa8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 ZNF215Q9UL58 517 aaPredicted RBP8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 NFE2L3Q9Y4A8 694 aa8.73□□□□□ -1.01
TM4SF1-201ENST00000305366 LCHNA4D1U4 455 aa8.72□□□□□ -1.01
TM4SF1-201ENST00000305366 GOLGA6L9A6NEM1 432 aa8.72□□□□□ -1.01
TM4SF1-201ENST00000305366 OPLAHO14841 1288 aa8.72□□□□□ -1.01
TM4SF1-201ENST00000305366 PLEKHA8P1O95397 391 aa8.72□□□□□ -1.01
TM4SF1-201ENST00000305366 SELPP16109 830 aa8.72□□□□□ -1.01
TM4SF1-201ENST00000305366 KCNQ1P51787 676 aa8.72□□□□□ -1.01
TM4SF1-201ENST00000305366 DEFB103AP81534 67 aa8.72□□□□□ -1.01
TM4SF1-201ENST00000305366 TAP1Q03518 808 aa8.72□□□□□ -1.01
TM4SF1-201ENST00000305366 LAMC2Q13753 1193 aa8.72□□□□□ -1.01
TM4SF1-201ENST00000305366 TCTN1Q2MV58 587 aa8.72□□□□□ -1.01
TM4SF1-201ENST00000305366 FAM43BQ6ZT52 329 aaPredicted RBP8.72□□□□□ -1.01
TM4SF1-201ENST00000305366 CCDC155Q8N6L0 562 aa8.72□□□□□ -1.01
TM4SF1-201ENST00000305366 ZNF397Q8NF99 534 aaPredicted RBP8.72□□□□□ -1.01
TM4SF1-201ENST00000305366 IL31RAQ8NI17 732 aa8.72□□□□□ -1.01
TM4SF1-201ENST00000305366 GSDMAQ96QA5 445 aa8.72□□□□□ -1.01
TM4SF1-201ENST00000305366 CTAGE1Q96RT6 745 aa8.72□□□□□ -1.01
TM4SF1-201ENST00000305366 SLC9A7Q96T83 725 aa8.72□□□□□ -1.01
TM4SF1-201ENST00000305366 BCAS3Q9H6U6 928 aa8.72□□□□□ -1.01
TM4SF1-201ENST00000305366 MLXIPQ9HAP2 919 aa8.72□□□□□ -1.01
TM4SF1-201ENST00000305366 OGFRQ9NZT2 677 aa8.72□□□□□ -1.01
TM4SF1-201ENST00000305366 MAD2L2Q9UI95 211 aa8.72□□□□□ -1.01
TM4SF1-201ENST00000305366 MTCH2Q9Y6C9 303 aa8.72□□□□□ -1.01
TM4SF1-201ENST00000305366 MYH4Q9Y623 1939 aa8.72□□□□□ -1.01
TM4SF1-201ENST00000305366 A0A1B0GTH6 734 aa8.71□□□□□ -1.01
TM4SF1-201ENST00000305366 GCOM1H8Y6P7 765 aaPredicted RBP8.71□□□□□ -1.01
TM4SF1-201ENST00000305366 ZBTB5O15062 677 aa8.71□□□□□ -1.01
TM4SF1-201ENST00000305366 ZSCAN12O43309 604 aa8.71□□□□□ -1.01
TM4SF1-201ENST00000305366 STX10O60499 249 aa8.71□□□□□ -1.01
TM4SF1-201ENST00000305366 NBNO60934 754 aa8.71□□□□□ -1.01
TM4SF1-201ENST00000305366 GGPS1O95749 300 aa8.71□□□□□ -1.01
TM4SF1-201ENST00000305366 POLR2MP0CAP2 368 aa8.71□□□□□ -1.01
TM4SF1-201ENST00000305366 CKBP12277 381 aa8.71□□□□□ -1.01
TM4SF1-201ENST00000305366 COL9A1P20849 921 aa8.71□□□□□ -1.01
TM4SF1-201ENST00000305366 ATP2C1P98194 919 aaPredicted RBP8.71□□□□□ -1.01
TM4SF1-201ENST00000305366 SP2Q02086 613 aa8.71□□□□□ -1.01
TM4SF1-201ENST00000305366 SP4Q02446 784 aa8.71□□□□□ -1.01
TM4SF1-201ENST00000305366 GPNMBQ14956 572 aa8.71□□□□□ -1.01
TM4SF1-201ENST00000305366 HSDL1Q3SXM5 330 aa8.71□□□□□ -1.01
TM4SF1-201ENST00000305366 ZNF618Q5T7W0 954 aa8.71□□□□□ -1.01
TM4SF1-201ENST00000305366 SPATA1Q5VX52 437 aa8.71□□□□□ -1.01
TM4SF1-201ENST00000305366 SPECC1LQ69YQ0 1117 aa8.71□□□□□ -1.01
TM4SF1-201ENST00000305366 USP49Q70CQ1 688 aa8.71□□□□□ -1.01
TM4SF1-201ENST00000305366 REXO1L1PQ8IX06 675 aa8.71□□□□□ -1.01
TM4SF1-201ENST00000305366 CTCFLQ8NI51 663 aaPredicted RBP8.71□□□□□ -1.01
TM4SF1-201ENST00000305366 PHOSPHO2Q8TCD6 241 aa8.71□□□□□ -1.01
TM4SF1-201ENST00000305366 AFAP1L1Q8TED9 768 aa8.71□□□□□ -1.01
TM4SF1-201ENST00000305366 WNT8BQ93098 351 aa8.71□□□□□ -1.01
TM4SF1-201ENST00000305366 PDCD2LQ9BRP1 358 aa8.71□□□□□ -1.01
TM4SF1-201ENST00000305366 SRRTQ9BXP5 876 aaKnown RBP8.71□□□□□ -1.01
TM4SF1-201ENST00000305366 V9GY48 417 aaPredicted RBP8.71□□□□□ -1.01
TM4SF1-201ENST00000305366 MYH6P13533 1939 aa8.71□□□□□ -1.02
TM4SF1-201ENST00000305366 A0A087X0B3 334 aa8.71□□□□□ -1.02
TM4SF1-201ENST00000305366 RGS20O76081 388 aa8.71□□□□□ -1.02
TM4SF1-201ENST00000305366 SCG2P13521 617 aa8.71□□□□□ -1.02
TM4SF1-201ENST00000305366 THPOP40225 353 aa8.71□□□□□ -1.02
TM4SF1-201ENST00000305366 WDR5P61964 334 aaKnown RBP8.71□□□□□ -1.02
TM4SF1-201ENST00000305366 DPYDQ12882 1025 aa8.71□□□□□ -1.02
TM4SF1-201ENST00000305366 GRB10Q13322 594 aa8.71□□□□□ -1.02
TM4SF1-201ENST00000305366 CUL4BQ13620 913 aa8.71□□□□□ -1.02
TM4SF1-201ENST00000305366 HIC1Q14526 733 aa8.71□□□□□ -1.02
TM4SF1-201ENST00000305366 NR1I3Q14994 352 aa8.71□□□□□ -1.02
TM4SF1-201ENST00000305366 PGM5Q15124 567 aa8.71□□□□□ -1.02
TM4SF1-201ENST00000305366 PFKFB3Q16875 520 aaPredicted RBP8.71□□□□□ -1.02
TM4SF1-201ENST00000305366 SLC35G1Q2M3R5 365 aa8.71□□□□□ -1.02
TM4SF1-201ENST00000305366 EARS2Q5JPH6 523 aaKnown RBP8.71□□□□□ -1.02
TM4SF1-201ENST00000305366 TTC38Q5R3I4 469 aa8.71□□□□□ -1.02
TM4SF1-201ENST00000305366 UTP14CQ5TAP6 766 aaKnown RBP8.71□□□□□ -1.02
TM4SF1-201ENST00000305366 TRIM65Q6PJ69 517 aa8.71□□□□□ -1.02
TM4SF1-201ENST00000305366 SYT10Q6XYQ8 523 aa8.71□□□□□ -1.02
TM4SF1-201ENST00000305366 SRBD1Q8N5C6 995 aaKnown RBP8.71□□□□□ -1.02
TM4SF1-201ENST00000305366 PPTC7Q8NI37 304 aa8.71□□□□□ -1.02
TM4SF1-201ENST00000305366 CAGE1Q8TC20 777 aa8.71□□□□□ -1.02
TM4SF1-201ENST00000305366 PAGE5Q96GU1 130 aa8.71□□□□□ -1.02
TM4SF1-201ENST00000305366 MED15Q96RN5 788 aa8.71□□□□□ -1.02
TM4SF1-201ENST00000305366 SH3GLB2Q9NR46 395 aa8.71□□□□□ -1.02
TM4SF1-201ENST00000305366 GTF2IRD1Q9UHL9 959 aa8.71□□□□□ -1.02
TM4SF1-201ENST00000305366 MCM3APO60318 1980 aa8.7□□□□□ -1.02
TM4SF1-201ENST00000305366 SPTBN5Q9NRC6 3674 aaKnown RBP8.7□□□□□ -1.02
TM4SF1-201ENST00000305366 PALM3A6NDB9 673 aaPredicted RBP8.7□□□□□ -1.02
TM4SF1-201ENST00000305366 FAM205CA6NFA0 338 aa8.7□□□□□ -1.02
TM4SF1-201ENST00000305366 PPFIA4O75335 1185 aa8.7□□□□□ -1.02
TM4SF1-201ENST00000305366 BMP1P13497 986 aa8.7□□□□□ -1.02
TM4SF1-201ENST00000305366 ATP2B1P20020 1258 aa8.7□□□□□ -1.02
TM4SF1-201ENST00000305366 CCND2P30279 289 aa8.7□□□□□ -1.02
TM4SF1-201ENST00000305366 KIF5BP33176 963 aa8.7□□□□□ -1.02
TM4SF1-201ENST00000305366 HSD17B4P51659 736 aa8.7□□□□□ -1.02
TM4SF1-201ENST00000305366 IKBKEQ14164 716 aa8.7□□□□□ -1.02
TM4SF1-201ENST00000305366 NAA30Q147X3 362 aaPredicted RBP8.7□□□□□ -1.02
TM4SF1-201ENST00000305366 CELF3Q5SZQ8 465 aaKnown RBP8.7□□□□□ -1.02
TM4SF1-201ENST00000305366 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.7□□□□□ -1.024e-11■□□□□ 9.2
TM4SF1-201ENST00000305366 APTXQ7Z2E3 356 aaKnown RBP8.7□□□□□ -1.02
TM4SF1-201ENST00000305366 VSIG10LQ86VR7 867 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms