RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 LRRC71Q8N4P6 559 aa29.69■■■□□ 2.34
CDKN2A-201ENST00000304494 TMEM40Q8WWA1 233 aa29.69■■■□□ 2.34
CDKN2A-201ENST00000304494 LINC01599Q8WXQ3 324 aa29.69■■■□□ 2.34
CDKN2A-201ENST00000304494 PPP1R16BQ96T49 567 aa29.69■■■□□ 2.34
CDKN2A-201ENST00000304494 OSMRQ99650 979 aa29.69■■■□□ 2.34
CDKN2A-201ENST00000304494 SUGCTQ9HAC7 445 aa29.69■■■□□ 2.34
CDKN2A-201ENST00000304494 ERVK-5Q9HDB9 667 aa29.69■■■□□ 2.34
CDKN2A-201ENST00000304494 LMCD1Q9NZU5 365 aa29.69■■■□□ 2.34
CDKN2A-201ENST00000304494 MYO9BQ13459 2157 aa29.69■■■□□ 2.34
CDKN2A-201ENST00000304494 ST18O60284 1047 aa29.68■■■□□ 2.34
CDKN2A-201ENST00000304494 STBD1O95210 358 aa29.68■■■□□ 2.34
CDKN2A-201ENST00000304494 P4HBP07237 508 aaKnown RBP29.68■■■□□ 2.34
CDKN2A-201ENST00000304494 MTERF2Q49AM1 385 aa29.68■■■□□ 2.34
CDKN2A-201ENST00000304494 RTN4RL1Q86UN2 441 aaPredicted RBP29.68■■■□□ 2.34
CDKN2A-201ENST00000304494 NPAS4Q8IUM7 802 aa29.68■■■□□ 2.34
CDKN2A-201ENST00000304494 FAM184AQ8NB25 1140 aa29.68■■■□□ 2.34
CDKN2A-201ENST00000304494 FBXO22Q8NEZ5 403 aa29.68■■■□□ 2.34
CDKN2A-201ENST00000304494 GDPD5Q8WTR4 605 aa29.68■■■□□ 2.34
CDKN2A-201ENST00000304494 C17orf80Q9BSJ5 609 aa29.68■■■□□ 2.34
CDKN2A-201ENST00000304494 DDX11L8A8MPP1 907 aa29.67■■■□□ 2.34
CDKN2A-201ENST00000304494 LPXNO60711 386 aa29.67■■■□□ 2.34
CDKN2A-201ENST00000304494 STAG3L1P0CL83 205 aa29.67■■■□□ 2.34
CDKN2A-201ENST00000304494 NLRP11P59045 1033 aaKnown RBP29.67■■■□□ 2.34
CDKN2A-201ENST00000304494 EPHA7Q15375 998 aa29.67■■■□□ 2.34
CDKN2A-201ENST00000304494 FIBCD1Q8N539 461 aa29.67■■■□□ 2.34
CDKN2A-201ENST00000304494 TMX1Q9H3N1 280 aa29.67■■■□□ 2.34
CDKN2A-201ENST00000304494 RNF216Q9NWF9 866 aaPredicted RBP29.67■■■□□ 2.34
CDKN2A-201ENST00000304494 ST3GAL5Q9UNP4 418 aa29.67■■■□□ 2.34
CDKN2A-201ENST00000304494 ADGRA3Q8IWK6 1321 aa29.67■■■□□ 2.34
CDKN2A-201ENST00000304494 COL4A4P53420 1690 aaPredicted RBP29.66■■■□□ 2.34
CDKN2A-201ENST00000304494 EVPLQ92817 2033 aa29.66■■■□□ 2.34
CDKN2A-201ENST00000304494 NEMFO60524 1076 aa29.66■■■□□ 2.34
CDKN2A-201ENST00000304494 DNM2P50570 870 aa29.66■■■□□ 2.34
CDKN2A-201ENST00000304494 GUCY1B3Q02153 619 aa29.66■■■□□ 2.34
CDKN2A-201ENST00000304494 CALCRLQ16602 461 aa29.66■■■□□ 2.34
CDKN2A-201ENST00000304494 NCAPH2Q6IBW4 605 aa29.66■■■□□ 2.34
CDKN2A-201ENST00000304494 DENND3A2RUS2 1198 aa29.65■■■□□ 2.34
CDKN2A-201ENST00000304494 DGKIO75912 1065 aa29.65■■■□□ 2.34
CDKN2A-201ENST00000304494 CDC42EP1Q00587 391 aa29.65■■■□□ 2.34
CDKN2A-201ENST00000304494 EPC2Q52LR7 807 aa29.65■■■□□ 2.34
CDKN2A-201ENST00000304494 ANO5Q75V66 913 aa29.65■■■□□ 2.34
CDKN2A-201ENST00000304494 ZNF689Q96CS4 500 aaPredicted RBP29.65■■■□□ 2.34
CDKN2A-201ENST00000304494 CEP89Q96ST8 783 aa29.65■■■□□ 2.34
CDKN2A-201ENST00000304494 JPH2Q9BR39 696 aaPredicted RBP29.65■■■□□ 2.34
CDKN2A-201ENST00000304494 ADAMTS10Q9H324 1103 aa29.65■■■□□ 2.34
CDKN2A-201ENST00000304494 RC3H2Q9HBD1 1191 aaKnown RBP29.65■■■□□ 2.34
CDKN2A-201ENST00000304494 C1orf112Q9NSG2 853 aa29.65■■■□□ 2.34
CDKN2A-201ENST00000304494 THEGQ9P2T0 379 aa29.65■■■□□ 2.34
CDKN2A-201ENST00000304494 PCDHA12Q9UN75 941 aa29.65■■■□□ 2.34
CDKN2A-201ENST00000304494 LOXHD1Q8IVV2 1947 aa29.65■■■□□ 2.34
CDKN2A-201ENST00000304494 TMEM150BA6NC51 233 aa29.64■■■□□ 2.34
CDKN2A-201ENST00000304494 DLL1O00548 723 aa29.64■■■□□ 2.34
CDKN2A-201ENST00000304494 GPC3P51654 580 aa29.64■■■□□ 2.34
CDKN2A-201ENST00000304494 SPIRE1Q08AE8 756 aa29.64■■■□□ 2.34
CDKN2A-201ENST00000304494 FAM228AQ86W67 206 aa29.64■■■□□ 2.34
CDKN2A-201ENST00000304494 TMEM192Q8IY95 271 aa29.64■■■□□ 2.34
CDKN2A-201ENST00000304494 CRIPAKQ8N1N5 446 aa29.64■■■□□ 2.34
CDKN2A-201ENST00000304494 SCLT1Q96NL6 688 aa29.64■■■□□ 2.34
CDKN2A-201ENST00000304494 FOXP1Q9H334 677 aaPredicted RBP29.64■■■□□ 2.34
CDKN2A-201ENST00000304494 RGS18Q9NS28 235 aa29.64■■■□□ 2.34
CDKN2A-201ENST00000304494 LRFN2Q9ULH4 789 aa29.64■■■□□ 2.34
CDKN2A-201ENST00000304494 RWDD3Q9Y3V2 267 aa29.64■■■□□ 2.34
CDKN2A-201ENST00000304494 PPME1Q9Y570 386 aa29.64■■■□□ 2.34
CDKN2A-201ENST00000304494 TTC3P53804 2025 aa29.63■■■□□ 2.33
CDKN2A-201ENST00000304494 IGKV6-21A0A0C4DH24 114 aa29.63■■■□□ 2.33
CDKN2A-201ENST00000304494 EIF4BP23588 611 aaKnown RBP29.63■■■□□ 2.33
CDKN2A-201ENST00000304494 SARSP49591 514 aaKnown RBP29.63■■■□□ 2.33
CDKN2A-201ENST00000304494 BTG3Q14201 252 aaPredicted RBP29.63■■■□□ 2.33
CDKN2A-201ENST00000304494 C4orf19Q8IY42 314 aa29.63■■■□□ 2.33
CDKN2A-201ENST00000304494 EXOC8Q8IYI6 725 aa29.63■■■□□ 2.33
CDKN2A-201ENST00000304494 FBXO18Q8NFZ0 1043 aa29.63■■■□□ 2.33
CDKN2A-201ENST00000304494 ATXN2LQ8WWM7 1075 aaKnown RBP29.63■■■□□ 2.33
CDKN2A-201ENST00000304494 ADAM2Q99965 735 aa29.63■■■□□ 2.33
CDKN2A-201ENST00000304494 LXNQ9BS40 222 aa29.63■■■□□ 2.33
CDKN2A-201ENST00000304494 PRDM6Q9NQX0 595 aa29.63■■■□□ 2.33
CDKN2A-201ENST00000304494 CYP26B1Q9NR63 512 aa29.63■■■□□ 2.33
CDKN2A-201ENST00000304494 MAFO75444 373 aaPredicted RBP29.62■■■□□ 2.33
CDKN2A-201ENST00000304494 SKIV2LQ15477 1246 aaKnown RBP29.62■■■□□ 2.33
CDKN2A-201ENST00000304494 NLRP7Q8WX94 980 aa29.62■■■□□ 2.33
CDKN2A-201ENST00000304494 SH2D3AQ9BRG2 576 aa29.62■■■□□ 2.33
CDKN2A-201ENST00000304494 ZSWIM4Q9H7M6 989 aa29.62■■■□□ 2.33
CDKN2A-201ENST00000304494 TTC12Q9H892 705 aaPredicted RBP29.62■■■□□ 2.33
CDKN2A-201ENST00000304494 MGEA5O60502 916 aa29.61■■■□□ 2.33
CDKN2A-201ENST00000304494 GNL2Q13823 731 aaKnown RBP29.61■■■□□ 2.33
CDKN2A-201ENST00000304494 PLA2G4FQ68DD2 849 aa29.61■■■□□ 2.33
CDKN2A-201ENST00000304494 SLC24A5Q71RS6 500 aa29.61■■■□□ 2.33
CDKN2A-201ENST00000304494 OTUD6AQ7L8S5 288 aa29.61■■■□□ 2.33
CDKN2A-201ENST00000304494 CMTR2Q8IYT2 770 aaKnown RBP29.61■■■□□ 2.33
CDKN2A-201ENST00000304494 SLC7A3Q8WY07 619 aa29.61■■■□□ 2.33
CDKN2A-201ENST00000304494 PCDHB7Q9Y5E2 793 aa29.61■■■□□ 2.33
CDKN2A-201ENST00000304494 H3BNC9 293 aa29.6■■■□□ 2.33
CDKN2A-201ENST00000304494 PTPROQ16827 1216 aa29.6■■■□□ 2.33
CDKN2A-201ENST00000304494 NEK9Q8TD19 979 aa29.6■■■□□ 2.33
CDKN2A-201ENST00000304494 CLP1Q92989 425 aaKnown RBP29.6■■■□□ 2.33
CDKN2A-201ENST00000304494 DYDC2Q96IM9 177 aa29.6■■■□□ 2.33
CDKN2A-201ENST00000304494 CEP170P1Q96L14 293 aa29.6■■■□□ 2.33
CDKN2A-201ENST00000304494 MTMR9Q96QG7 549 aa29.6■■■□□ 2.33
CDKN2A-201ENST00000304494 RGL1Q9NZL6 768 aa29.6■■■□□ 2.33
CDKN2A-201ENST00000304494 WRAP73Q9P2S5 460 aaPredicted RBP29.6■■■□□ 2.33
CDKN2A-201ENST00000304494 KIF3AQ9Y496 699 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms