RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 UNC45AQ9H3U1 944 aa18.79■□□□□ 0.6
TRAPPC1-201ENST00000303731 RGS18Q9NS28 235 aa18.79■□□□□ 0.6
TRAPPC1-201ENST00000303731 MYO7AQ13402 2215 aa18.78■□□□□ 0.6
TRAPPC1-201ENST00000303731 CHMP2AO43633 222 aa18.78■□□□□ 0.6
TRAPPC1-201ENST00000303731 MMP1P03956 469 aa18.78■□□□□ 0.6
TRAPPC1-201ENST00000303731 GCFC2P16383 781 aaKnown RBP18.78■□□□□ 0.6
TRAPPC1-201ENST00000303731 KCNA5P22460 613 aa18.78■□□□□ 0.6
TRAPPC1-201ENST00000303731 SCRN1Q12765 414 aa18.78■□□□□ 0.6
TRAPPC1-201ENST00000303731 COL19A1Q14993 1142 aa18.78■□□□□ 0.6
TRAPPC1-201ENST00000303731 NPY5RQ15761 445 aa18.78■□□□□ 0.6
TRAPPC1-201ENST00000303731 TCEAL5Q5H9L2 206 aa18.78■□□□□ 0.6
TRAPPC1-201ENST00000303731 EFCAB12Q6NXP0 572 aa18.78■□□□□ 0.6
TRAPPC1-201ENST00000303731 TRMT1LQ7Z2T5 733 aaKnown RBP18.78■□□□□ 0.6
TRAPPC1-201ENST00000303731 MIER3Q7Z3K6 550 aa18.78■□□□□ 0.6
TRAPPC1-201ENST00000303731 LINC01465Q8N7H1 131 aa18.78■□□□□ 0.6
TRAPPC1-201ENST00000303731 NEK9Q8TD19 979 aa18.78■□□□□ 0.6
TRAPPC1-201ENST00000303731 TMEM40Q8WWA1 233 aa18.78■□□□□ 0.6
TRAPPC1-201ENST00000303731 PPP2R3CQ969Q6 453 aa18.78■□□□□ 0.6
TRAPPC1-201ENST00000303731 OSMRQ99650 979 aa18.78■□□□□ 0.6
TRAPPC1-201ENST00000303731 ADAM2Q99965 735 aa18.78■□□□□ 0.6
TRAPPC1-201ENST00000303731 LARP6Q9BRS8 491 aaKnown RBP18.78■□□□□ 0.6
TRAPPC1-201ENST00000303731 PHF20Q9BVI0 1012 aa18.78■□□□□ 0.6
TRAPPC1-201ENST00000303731 AKT3Q9Y243 479 aa18.78■□□□□ 0.6
TRAPPC1-201ENST00000303731 FAM50BQ9Y247 325 aa18.78■□□□□ 0.6
TRAPPC1-201ENST00000303731 MRPL42Q9Y6G3 142 aaKnown RBP18.78■□□□□ 0.6
TRAPPC1-201ENST00000303731 KIAA1671Q9BY89 1806 aa18.77■□□□□ 0.6
TRAPPC1-201ENST00000303731 CCDC194A0A1B0GVG4 234 aa18.77■□□□□ 0.6
TRAPPC1-201ENST00000303731 ZNF862O60290 1169 aa18.77■□□□□ 0.6
TRAPPC1-201ENST00000303731 TDP2O95551 362 aa18.77■□□□□ 0.6
TRAPPC1-201ENST00000303731 VTNP04004 478 aa18.77■□□□□ 0.6
TRAPPC1-201ENST00000303731 TBC1D8BQ0IIM8 1120 aa18.77■□□□□ 0.6
TRAPPC1-201ENST00000303731 XKR3Q5GH77 459 aa18.77■□□□□ 0.6
TRAPPC1-201ENST00000303731 FAM228AQ86W67 206 aa18.77■□□□□ 0.6
TRAPPC1-201ENST00000303731 ETNPPLQ8TBG4 499 aa18.77■□□□□ 0.6
TRAPPC1-201ENST00000303731 NECAB3Q96P71 396 aaPredicted RBP18.77■□□□□ 0.6
TRAPPC1-201ENST00000303731 ELAC1Q9H777 363 aaKnown RBP18.77■□□□□ 0.6
TRAPPC1-201ENST00000303731 CDHR5Q9HBB8 845 aa18.77■□□□□ 0.6
TRAPPC1-201ENST00000303731 AAASQ9NRG9 546 aa18.77■□□□□ 0.6
TRAPPC1-201ENST00000303731 DDX25Q9UHL0 483 aaKnown RBP18.77■□□□□ 0.6
TRAPPC1-201ENST00000303731 FNDC1Q4ZHG4 1894 aaPredicted RBP18.76■□□□□ 0.59
TRAPPC1-201ENST00000303731 C9IYK1 514 aa18.76■□□□□ 0.59
TRAPPC1-201ENST00000303731 GRM6O15303 877 aa18.76■□□□□ 0.59
TRAPPC1-201ENST00000303731 DKC1O60832 514 aaKnown RBP eCLIP18.76■□□□□ 0.59
TRAPPC1-201ENST00000303731 EIF4BP23588 611 aaKnown RBP18.76■□□□□ 0.59
TRAPPC1-201ENST00000303731 CLCN3P51790 818 aa18.76■□□□□ 0.59
TRAPPC1-201ENST00000303731 NLRP11P59045 1033 aaKnown RBP18.76■□□□□ 0.59
TRAPPC1-201ENST00000303731 PPP4R3AQ6IN85 833 aa18.76■□□□□ 0.59
TRAPPC1-201ENST00000303731 B3GNT9Q6UX72 402 aa18.76■□□□□ 0.59
TRAPPC1-201ENST00000303731 FAM20AQ96MK3 541 aa18.76■□□□□ 0.59
TRAPPC1-201ENST00000303731 AIFM3Q96NN9 605 aa18.76■□□□□ 0.59
TRAPPC1-201ENST00000303731 C1QTNF1Q9BXJ1 281 aa18.76■□□□□ 0.59
TRAPPC1-201ENST00000303731 NIFKQ9BYG3 293 aaKnown RBP18.76■□□□□ 0.59
TRAPPC1-201ENST00000303731 TMEM161AQ9NX61 479 aa18.76■□□□□ 0.59
TRAPPC1-201ENST00000303731 TPCN1Q9ULQ1 816 aa18.76■□□□□ 0.59
TRAPPC1-201ENST00000303731 PLAGL2Q9UPG8 496 aa18.76■□□□□ 0.59
TRAPPC1-201ENST00000303731 ATG2AQ2TAZ0 1938 aa18.76■□□□□ 0.59
TRAPPC1-201ENST00000303731 HOXA2O43364 376 aa18.75■□□□□ 0.59
TRAPPC1-201ENST00000303731 MGEA5O60502 916 aa18.75■□□□□ 0.59
TRAPPC1-201ENST00000303731 ZSCAN20P17040 1043 aaPredicted RBP18.75■□□□□ 0.59
TRAPPC1-201ENST00000303731 DNM2P50570 870 aa18.75■□□□□ 0.59
TRAPPC1-201ENST00000303731 UGCGQ16739 394 aa18.75■□□□□ 0.59
TRAPPC1-201ENST00000303731 CSPP1Q1MSJ5 1256 aa18.75■□□□□ 0.59
TRAPPC1-201ENST00000303731 INF2Q27J81 1249 aa18.75■□□□□ 0.59
TRAPPC1-201ENST00000303731 PAN2Q504Q3 1202 aaKnown RBP18.75■□□□□ 0.59
TRAPPC1-201ENST00000303731 NEK8Q86SG6 692 aa18.75■□□□□ 0.59
TRAPPC1-201ENST00000303731 JPH2Q9BR39 696 aaPredicted RBP18.75■□□□□ 0.59
TRAPPC1-201ENST00000303731 ATP6V0A4Q9HBG4 840 aa18.75■□□□□ 0.59
TRAPPC1-201ENST00000303731 KCNJ14Q9UNX9 436 aa18.75■□□□□ 0.59
TRAPPC1-201ENST00000303731 PCDHB12Q9Y5F1 795 aa18.75■□□□□ 0.59
TRAPPC1-201ENST00000303731 TBX3O15119 743 aa18.74■□□□□ 0.59
TRAPPC1-201ENST00000303731 GPC3P51654 580 aa18.74■□□□□ 0.59
TRAPPC1-201ENST00000303731 FAM189BP81408 668 aa18.74■□□□□ 0.59
TRAPPC1-201ENST00000303731 UBE3AQ05086 875 aa18.74■□□□□ 0.59
TRAPPC1-201ENST00000303731 TARBP2Q15633 366 aaKnown RBP18.74■□□□□ 0.59
TRAPPC1-201ENST00000303731 LETM2Q2VYF4 491 aa18.74■□□□□ 0.59
TRAPPC1-201ENST00000303731 PTCRAQ6ISU1 281 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC1-201ENST00000303731 EXOC8Q8IYI6 725 aa18.74■□□□□ 0.59
TRAPPC1-201ENST00000303731 LRRC71Q8N4P6 559 aa18.74■□□□□ 0.59
TRAPPC1-201ENST00000303731 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC1-201ENST00000303731 SCLT1Q96NL6 688 aa18.74■□□□□ 0.59
TRAPPC1-201ENST00000303731 PPP1R16BQ96T49 567 aa18.74■□□□□ 0.59
TRAPPC1-201ENST00000303731 ADAMTS10Q9H324 1103 aa18.74■□□□□ 0.59
TRAPPC1-201ENST00000303731 BRMS1Q9HCU9 246 aa18.74■□□□□ 0.59
TRAPPC1-201ENST00000303731 SEPT9Q9UHD8 586 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC1-201ENST00000303731 PPME1Q9Y570 386 aa18.74■□□□□ 0.59
TRAPPC1-201ENST00000303731 GRXCR2A6NFK2 248 aa18.73■□□□□ 0.59
TRAPPC1-201ENST00000303731 AK2P54819 239 aa18.73■□□□□ 0.59
TRAPPC1-201ENST00000303731 PSMC5P62195 406 aa18.73■□□□□ 0.59
TRAPPC1-201ENST00000303731 PPP2R5CQ13362 524 aa18.73■□□□□ 0.59
TRAPPC1-201ENST00000303731 DSC3Q14574 896 aa18.73■□□□□ 0.59
TRAPPC1-201ENST00000303731 KLHL23Q8NBE8 558 aa18.73■□□□□ 0.59
TRAPPC1-201ENST00000303731 RSPH1Q8WYR4 309 aa18.73■□□□□ 0.59
TRAPPC1-201ENST00000303731 ALG13Q9NP73 1137 aaKnown RBP18.73■□□□□ 0.59
TRAPPC1-201ENST00000303731 KCNMB3Q9NPA1 279 aa18.73■□□□□ 0.59
TRAPPC1-201ENST00000303731 CLDND1Q9NY35 253 aa18.73■□□□□ 0.59
TRAPPC1-201ENST00000303731 ORC3Q9UBD5 711 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC1-201ENST00000303731 FSD2A1L4K1 749 aa18.72■□□□□ 0.59
TRAPPC1-201ENST00000303731 TBKBP1A7MCY6 615 aa18.72■□□□□ 0.59
TRAPPC1-201ENST00000303731 ITGB1P05556 798 aa18.72■□□□□ 0.59
TRAPPC1-201ENST00000303731 DARSP14868 501 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms