RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 FOSL2P15408 326 aa12.67□□□□□ -0.38
CLCC1-201ENST00000302500 KCNJ6P48051 423 aa12.67□□□□□ -0.38
CLCC1-201ENST00000302500 GPC3P51654 580 aa12.67□□□□□ -0.38
CLCC1-201ENST00000302500 CLCN3P51790 818 aa12.67□□□□□ -0.38
CLCC1-201ENST00000302500 XKR3Q5GH77 459 aa12.67□□□□□ -0.38
CLCC1-201ENST00000302500 IER5Q5VY09 327 aa12.67□□□□□ -0.38
CLCC1-201ENST00000302500 MIER3Q7Z3K6 550 aa12.67□□□□□ -0.38
CLCC1-201ENST00000302500 C4orf19Q8IY42 314 aa12.67□□□□□ -0.38
CLCC1-201ENST00000302500 BANK1Q8NDB2 785 aa12.67□□□□□ -0.38
CLCC1-201ENST00000302500 TNPO1Q92973 898 aaKnown RBP12.67□□□□□ -0.38
CLCC1-201ENST00000302500 CLP1Q92989 425 aaKnown RBP12.67□□□□□ -0.38
CLCC1-201ENST00000302500 FOXP1Q9H334 677 aaPredicted RBP12.67□□□□□ -0.38
CLCC1-201ENST00000302500 DHX33Q9H6R0 707 aaKnown RBP12.67□□□□□ -0.38
CLCC1-201ENST00000302500 SUGCTQ9HAC7 445 aa12.67□□□□□ -0.38
CLCC1-201ENST00000302500 RNF19AQ9NV58 838 aa12.67□□□□□ -0.38
CLCC1-201ENST00000302500 MTCH2Q9Y6C9 303 aa12.67□□□□□ -0.38
CLCC1-201ENST00000302500 C9IYK1 514 aa12.66□□□□□ -0.38
CLCC1-201ENST00000302500 ZBTB39O15060 712 aa12.66□□□□□ -0.38
CLCC1-201ENST00000302500 MAGEB2O15479 319 aa12.66□□□□□ -0.38
CLCC1-201ENST00000302500 DGKIO75912 1065 aa12.66□□□□□ -0.38
CLCC1-201ENST00000302500 VTNP04004 478 aa12.66□□□□□ -0.38
CLCC1-201ENST00000302500 SPATA31C1P0DKV0 1188 aa12.66□□□□□ -0.38
CLCC1-201ENST00000302500 CRYBB1P53674 252 aaPredicted RBP12.66□□□□□ -0.38
CLCC1-201ENST00000302500 PSMC5P62195 406 aa12.66□□□□□ -0.38
CLCC1-201ENST00000302500 FAM189BP81408 668 aa12.66□□□□□ -0.38
CLCC1-201ENST00000302500 HMGN5P82970 282 aaKnown RBP12.66□□□□□ -0.38
CLCC1-201ENST00000302500 GUCY1B3Q02153 619 aa12.66□□□□□ -0.38
CLCC1-201ENST00000302500 GRB10Q13322 594 aa12.66□□□□□ -0.38
CLCC1-201ENST00000302500 EPHA7Q15375 998 aa12.66□□□□□ -0.38
CLCC1-201ENST00000302500 KIZQ2M2Z5 673 aa12.66□□□□□ -0.38
CLCC1-201ENST00000302500 TMEM266Q2M3C6 531 aa12.66□□□□□ -0.38
CLCC1-201ENST00000302500 FAM43BQ6ZT52 329 aaPredicted RBP12.66□□□□□ -0.38
CLCC1-201ENST00000302500 RSPH3Q86UC2 560 aa12.66□□□□□ -0.38
CLCC1-201ENST00000302500 LRRC71Q8N4P6 559 aa12.66□□□□□ -0.38
CLCC1-201ENST00000302500 SH2D3AQ9BRG2 576 aa12.66□□□□□ -0.38
CLCC1-201ENST00000302500 C17orf80Q9BSJ5 609 aa12.66□□□□□ -0.38
CLCC1-201ENST00000302500 XPNPEP1Q9NQW7 623 aa12.66□□□□□ -0.38
CLCC1-201ENST00000302500 RGL1Q9NZL6 768 aa12.66□□□□□ -0.38
CLCC1-201ENST00000302500 CEP131Q9UPN4 1083 aa12.66□□□□□ -0.38
CLCC1-201ENST00000302500 INSL6Q9Y581 213 aa12.66□□□□□ -0.38
CLCC1-201ENST00000302500 C5orf67F2Z3F1 127 aa12.65□□□□□ -0.38
CLCC1-201ENST00000302500 AMHP03971 560 aa12.65□□□□□ -0.38
CLCC1-201ENST00000302500 P4HBP07237 508 aaKnown RBP12.65□□□□□ -0.38
CLCC1-201ENST00000302500 QARSP47897 775 aaKnown RBP12.65□□□□□ -0.38
CLCC1-201ENST00000302500 NPEPPSP55786 919 aa12.65□□□□□ -0.38
CLCC1-201ENST00000302500 CUL4AQ13619 759 aa12.65□□□□□ -0.38
CLCC1-201ENST00000302500 COL19A1Q14993 1142 aa12.65□□□□□ -0.38
CLCC1-201ENST00000302500 EFCAB12Q6NXP0 572 aa12.65□□□□□ -0.38
CLCC1-201ENST00000302500 NOSTRINQ8IVI9 506 aa12.65□□□□□ -0.38
CLCC1-201ENST00000302500 MYOCDQ8IZQ8 938 aa12.65□□□□□ -0.38
CLCC1-201ENST00000302500 OSMRQ99650 979 aa12.65□□□□□ -0.38
CLCC1-201ENST00000302500 NAP1L4Q99733 375 aaKnown RBP12.65□□□□□ -0.38
CLCC1-201ENST00000302500 LXNQ9BS40 222 aa12.65□□□□□ -0.38
CLCC1-201ENST00000302500 IFT122Q9HBG6 1241 aa12.65□□□□□ -0.38
CLCC1-201ENST00000302500 PRDM6Q9NQX0 595 aa12.65□□□□□ -0.38
CLCC1-201ENST00000302500 RGS18Q9NS28 235 aa12.65□□□□□ -0.38
CLCC1-201ENST00000302500 ST3GAL5Q9UNP4 418 aa12.65□□□□□ -0.38
CLCC1-201ENST00000302500 NEMFO60524 1076 aa12.64□□□□□ -0.39
CLCC1-201ENST00000302500 ATF7P17544 494 aaPredicted RBP12.64□□□□□ -0.39
CLCC1-201ENST00000302500 FOSBP53539 338 aa12.64□□□□□ -0.39
CLCC1-201ENST00000302500 ORC2Q13416 577 aaPredicted RBP12.64□□□□□ -0.39
CLCC1-201ENST00000302500 CAMK1Q14012 370 aa12.64□□□□□ -0.39
CLCC1-201ENST00000302500 IL17AQ16552 155 aa12.64□□□□□ -0.39
CLCC1-201ENST00000302500 PLA2G4FQ68DD2 849 aa12.64□□□□□ -0.39
CLCC1-201ENST00000302500 SLFN12Q8IYM2 578 aa12.64□□□□□ -0.39
CLCC1-201ENST00000302500 C8orf76Q96K31 380 aa12.64□□□□□ -0.39
CLCC1-201ENST00000302500 FTHL17Q9BXU8 183 aa12.64□□□□□ -0.39
CLCC1-201ENST00000302500 CERS4Q9HA82 394 aa12.64□□□□□ -0.39
CLCC1-201ENST00000302500 CYP26B1Q9NR63 512 aa12.64□□□□□ -0.39
CLCC1-201ENST00000302500 NRBP2Q9NSY0 501 aa12.64□□□□□ -0.39
CLCC1-201ENST00000302500 SAMM50Q9Y512 469 aa12.64□□□□□ -0.39
CLCC1-201ENST00000302500 ADGRA3Q8IWK6 1321 aa12.64□□□□□ -0.39
CLCC1-201ENST00000302500 POTEMA6NI47 508 aa12.63□□□□□ -0.39
CLCC1-201ENST00000302500 DARSP14868 501 aaKnown RBP12.63□□□□□ -0.39
CLCC1-201ENST00000302500 EIF4BP23588 611 aaKnown RBP12.63□□□□□ -0.39
CLCC1-201ENST00000302500 NLRP11P59045 1033 aaKnown RBP12.63□□□□□ -0.39
CLCC1-201ENST00000302500 NBR1Q14596 966 aa12.63□□□□□ -0.39
CLCC1-201ENST00000302500 FAM117BQ6P1L5 589 aa12.63□□□□□ -0.39
CLCC1-201ENST00000302500 ZNF598Q86UK7 904 aaKnown RBP12.63□□□□□ -0.39
CLCC1-201ENST00000302500 CKAP2LQ8IYA6 745 aa12.63□□□□□ -0.39
CLCC1-201ENST00000302500 DYDC2Q96IM9 177 aa12.63□□□□□ -0.39
CLCC1-201ENST00000302500 TGS1Q96RS0 853 aaKnown RBP12.63□□□□□ -0.39
CLCC1-201ENST00000302500 EIF2AK1Q9BQI3 630 aaKnown RBP12.63□□□□□ -0.39
CLCC1-201ENST00000302500 TRAIPQ9BWF2 469 aa12.63□□□□□ -0.39
CLCC1-201ENST00000302500 TTC12Q9H892 705 aaPredicted RBP12.63□□□□□ -0.39
CLCC1-201ENST00000302500 PPME1Q9Y570 386 aa12.63□□□□□ -0.39
CLCC1-201ENST00000302500 RPS6KA5O75582 802 aa12.62□□□□□ -0.39
CLCC1-201ENST00000302500 YWHABP31946 246 aaKnown RBP12.62□□□□□ -0.39
CLCC1-201ENST00000302500 TRAPPC10P48553 1259 aa12.62□□□□□ -0.39
CLCC1-201ENST00000302500 GATMP50440 423 aa12.62□□□□□ -0.39
CLCC1-201ENST00000302500 PAK2Q13177 524 aa12.62□□□□□ -0.39
CLCC1-201ENST00000302500 CALCRLQ16602 461 aa12.62□□□□□ -0.39
CLCC1-201ENST00000302500 ECM1Q16610 540 aa12.62□□□□□ -0.39
CLCC1-201ENST00000302500 MTERF2Q49AM1 385 aa12.62□□□□□ -0.39
CLCC1-201ENST00000302500 EPC2Q52LR7 807 aa12.62□□□□□ -0.39
CLCC1-201ENST00000302500 TRMT1LQ7Z2T5 733 aaKnown RBP12.62□□□□□ -0.39
CLCC1-201ENST00000302500 NPAS4Q8IUM7 802 aa12.62□□□□□ -0.39
CLCC1-201ENST00000302500 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.62□□□□□ -0.39
CLCC1-201ENST00000302500 ZNF710Q8N1W2 664 aa12.62□□□□□ -0.39
CLCC1-201ENST00000302500 IGSF22Q8N9C0 903 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms