RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 FIZ1Q96SL8 496 aa17.31■□□□□ 0.36
HERPUD1-201ENST00000300302 SH2D3AQ9BRG2 576 aa17.31■□□□□ 0.36
HERPUD1-201ENST00000300302 TELO2Q9Y4R8 837 aa17.31■□□□□ 0.36
HERPUD1-201ENST00000300302 IGKV6D-21A0A0A0MT36 114 aa17.31■□□□□ 0.36
HERPUD1-201ENST00000300302 MARSP56192 900 aaKnown RBP17.31■□□□□ 0.36
HERPUD1-201ENST00000300302 INHBEP58166 350 aa17.31■□□□□ 0.36
HERPUD1-201ENST00000300302 TBC1D8BQ0IIM8 1120 aa17.31■□□□□ 0.36
HERPUD1-201ENST00000300302 FAM102BQ5T8I3 360 aa17.31■□□□□ 0.36
HERPUD1-201ENST00000300302 FBXO16Q8IX29 292 aaPredicted RBP17.31■□□□□ 0.36
HERPUD1-201ENST00000300302 MCPH1Q8NEM0 835 aa17.31■□□□□ 0.36
HERPUD1-201ENST00000300302 SCFD2Q8WU76 684 aa17.31■□□□□ 0.36
HERPUD1-201ENST00000300302 KIFAP3Q92845 792 aa17.31■□□□□ 0.36
HERPUD1-201ENST00000300302 CYP26B1Q9NR63 512 aa17.31■□□□□ 0.36
HERPUD1-201ENST00000300302 GSTTP1A0A1W2PQM5 241 aa17.3■□□□□ 0.36
HERPUD1-201ENST00000300302 FAM155AB1AL88 458 aaPredicted RBP17.3■□□□□ 0.36
HERPUD1-201ENST00000300302 K7ENM7 598 aa17.3■□□□□ 0.36
HERPUD1-201ENST00000300302 NOP56O00567 594 aaKnown RBP17.3■□□□□ 0.36
HERPUD1-201ENST00000300302 OATP04181 439 aa17.3■□□□□ 0.36
HERPUD1-201ENST00000300302 GRM1Q13255 1194 aa17.3■□□□□ 0.36
HERPUD1-201ENST00000300302 TTLL4Q14679 1199 aa17.3■□□□□ 0.36
HERPUD1-201ENST00000300302 NOLC1Q14978 699 aaKnown RBP eCLIP17.3■□□□□ 0.36
HERPUD1-201ENST00000300302 ZC2HC1CQ53FD0 456 aaPredicted RBP17.3■□□□□ 0.36
HERPUD1-201ENST00000300302 MIIPQ5JXC2 388 aa17.3■□□□□ 0.36
HERPUD1-201ENST00000300302 CELF3Q5SZQ8 465 aaKnown RBP17.3■□□□□ 0.36
HERPUD1-201ENST00000300302 HS2ST1Q7LGA3 356 aa17.3■□□□□ 0.36
HERPUD1-201ENST00000300302 PLEKHH3Q7Z736 793 aa17.3■□□□□ 0.36
HERPUD1-201ENST00000300302 DPP9Q86TI2 863 aa17.3■□□□□ 0.36
HERPUD1-201ENST00000300302 CNGA4Q8IV77 575 aa17.3■□□□□ 0.36
HERPUD1-201ENST00000300302 GOLGA5Q8TBA6 731 aa17.3■□□□□ 0.36
HERPUD1-201ENST00000300302 NDST4Q9H3R1 872 aa17.3■□□□□ 0.36
HERPUD1-201ENST00000300302 C17orf75Q9HAS0 396 aa17.3■□□□□ 0.36
HERPUD1-201ENST00000300302 DIS3Q9Y2L1 958 aaKnown RBP17.3■□□□□ 0.36
HERPUD1-201ENST00000300302 PLXNA1Q9UIW2 1896 aa17.3■□□□□ 0.36
HERPUD1-201ENST00000300302 MYH9P35579 1960 aaKnown RBP17.3■□□□□ 0.36
HERPUD1-201ENST00000300302 ARIH2O95376 493 aa17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 TXNP10599 105 aaKnown RBP17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 SMTNP53814 917 aa17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 RBL2Q08999 1139 aa17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 GRB14Q14449 540 aa17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 NFIL3Q16649 462 aa17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 DHX37Q8IY37 1157 aaKnown RBP17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 TC2NQ8N9U0 490 aa17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 AFAP1L1Q8TED9 768 aa17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 PANX2Q96RD6 677 aa17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 STRA6Q9BX79 667 aa17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 AZI2Q9H6S1 392 aa17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 TMEM206Q9H813 350 aa17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 ATP6V0A4Q9HBG4 840 aa17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 VTA1Q9NP79 307 aa17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 ARID2Q68CP9 1835 aa17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 IGF2BP3O00425 579 aaKnown RBP eCLIP17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 PPP1R37O75864 691 aa17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 NR3C1P04150 777 aa17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 TCF7P36402 384 aaPredicted RBP17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 STAT5BP51692 787 aa17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 ADKP55263 362 aaKnown RBP17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 KCNA1Q09470 495 aa17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 TAF1CQ15572 869 aaPredicted RBP17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 CCDC62Q6P9F0 684 aa17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 PAXIP1Q6ZW49 1069 aaPredicted RBP17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 SYCP3Q8IZU3 236 aa17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 CCDC51Q96ER9 411 aa17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 NUP58Q9BVL2 599 aa17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 GBP3Q9H0R5 595 aa17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 TMX1Q9H3N1 280 aa17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 ST6GALNAC4Q9H4F1 302 aa17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 NRBP2Q9NSY0 501 aa17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 SPTLC3Q9NUV7 552 aa17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 SLC5A4Q9NY91 659 aa17.29■□□□□ 0.36
HERPUD1-201ENST00000300302 MFAP3LO75121 409 aa17.28■□□□□ 0.36
HERPUD1-201ENST00000300302 GYPCP04921 128 aa17.28■□□□□ 0.36
HERPUD1-201ENST00000300302 KCNJ6P48051 423 aa17.28■□□□□ 0.36
HERPUD1-201ENST00000300302 DMP1Q13316 513 aaPredicted RBP17.28■□□□□ 0.36
HERPUD1-201ENST00000300302 FRMD5Q7Z6J6 570 aa17.28■□□□□ 0.36
HERPUD1-201ENST00000300302 RETREG2Q8NC44 543 aa17.28■□□□□ 0.36
HERPUD1-201ENST00000300302 CPLX3Q8WVH0 158 aa17.28■□□□□ 0.36
HERPUD1-201ENST00000300302 CCDC102AQ96A19 550 aa17.28■□□□□ 0.36
HERPUD1-201ENST00000300302 IQCDQ96DY2 449 aa17.28■□□□□ 0.36
HERPUD1-201ENST00000300302 FAM167AQ96KS9 214 aa17.28■□□□□ 0.36
HERPUD1-201ENST00000300302 ERGIC2Q96RQ1 377 aa17.28■□□□□ 0.36
HERPUD1-201ENST00000300302 BAG1Q99933 345 aaPredicted RBP17.28■□□□□ 0.36
HERPUD1-201ENST00000300302 NIFKQ9BYG3 293 aaKnown RBP17.28■□□□□ 0.36
HERPUD1-201ENST00000300302 KCNG1Q9UIX4 513 aa17.28■□□□□ 0.36
HERPUD1-201ENST00000300302 FAM184BQ9ULE4 1060 aa17.28■□□□□ 0.36
HERPUD1-201ENST00000300302 ZMYM2Q9UBW7 1377 aa17.28■□□□□ 0.36
HERPUD1-201ENST00000300302 SLC15A5A6NIM6 579 aa17.27■□□□□ 0.36
HERPUD1-201ENST00000300302 SLC16A3O15427 465 aaKnown RBP17.27■□□□□ 0.36
HERPUD1-201ENST00000300302 TGFB1I1O43294 461 aa17.27■□□□□ 0.36
HERPUD1-201ENST00000300302 STX10O60499 249 aa17.27■□□□□ 0.36
HERPUD1-201ENST00000300302 CASP14P31944 242 aa17.27■□□□□ 0.36
HERPUD1-201ENST00000300302 PEX3P56589 373 aa17.27■□□□□ 0.36
HERPUD1-201ENST00000300302 RTP1P59025 263 aa17.27■□□□□ 0.36
HERPUD1-201ENST00000300302 MTERF2Q49AM1 385 aa17.27■□□□□ 0.36
HERPUD1-201ENST00000300302 CEP135Q66GS9 1140 aa17.27■□□□□ 0.36
HERPUD1-201ENST00000300302 CYP4F22Q6NT55 531 aa17.27■□□□□ 0.36
HERPUD1-201ENST00000300302 SPATA33Q96N06 139 aa17.27■□□□□ 0.36
HERPUD1-201ENST00000300302 ACCSQ96QU6 501 aa17.27■□□□□ 0.36
HERPUD1-201ENST00000300302 ZIC5Q96T25 663 aa17.27■□□□□ 0.36
HERPUD1-201ENST00000300302 GPR20Q99678 358 aa17.27■□□□□ 0.36
HERPUD1-201ENST00000300302 METTL14Q9HCE5 456 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms