RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 TUBB8Q3ZCM7 444 aa14.38□□□□□ -0.11
CASC4-201ENST00000299957 METTL13Q8N6R0 699 aa14.38□□□□□ -0.11
CASC4-201ENST00000299957 ZNF473Q8WTR7 871 aaKnown RBP14.38□□□□□ -0.11
CASC4-201ENST00000299957 PBKQ96KB5 322 aa14.38□□□□□ -0.11
CASC4-201ENST00000299957 ERGIC2Q96RQ1 377 aa14.38□□□□□ -0.11
CASC4-201ENST00000299957 SPZ1Q9BXG8 430 aa14.38□□□□□ -0.11
CASC4-201ENST00000299957 RAB21Q9UL25 225 aa14.38□□□□□ -0.11
CASC4-201ENST00000299957 RIC1Q4ADV7 1423 aa14.38□□□□□ -0.11
CASC4-201ENST00000299957 NKRFO15226 690 aaKnown RBP eCLIP14.38□□□□□ -0.11
CASC4-201ENST00000299957 MUM1L1Q5H9M0 696 aa14.38□□□□□ -0.11
CASC4-201ENST00000299957 C10orf76Q5T2E6 689 aa14.38□□□□□ -0.11
CASC4-201ENST00000299957 PAPD7Q5XG87 772 aaKnown RBP14.38□□□□□ -0.11
CASC4-201ENST00000299957 INTUQ9ULD6 942 aa14.38□□□□□ -0.11
CASC4-201ENST00000299957 OVOS2A0A0G2JMS6 1433 aa14.38□□□□□ -0.11
CASC4-201ENST00000299957 SLIT1O75093 1534 aa14.37□□□□□ -0.11
CASC4-201ENST00000299957 ABCB11O95342 1321 aa14.37□□□□□ -0.11
CASC4-201ENST00000299957 ZNF543Q08ER8 600 aa14.37□□□□□ -0.11
CASC4-201ENST00000299957 WDR93Q6P2C0 686 aa14.37□□□□□ -0.11
CASC4-201ENST00000299957 RPUSD2Q8IZ73 545 aaKnown RBP14.37□□□□□ -0.11
CASC4-201ENST00000299957 RNF10Q8N5U6 811 aaKnown RBP14.37□□□□□ -0.11
CASC4-201ENST00000299957 SLC35G2Q8TBE7 412 aa14.37□□□□□ -0.11
CASC4-201ENST00000299957 RNF25Q96BH1 459 aaPredicted RBP14.37□□□□□ -0.11
CASC4-201ENST00000299957 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.37□□□□□ -0.116e-12■□□□□ 8.7
CASC4-201ENST00000299957 TEKT3Q9BXF9 490 aa14.37□□□□□ -0.11
CASC4-201ENST00000299957 FAM114A2Q9NRY5 505 aa14.37□□□□□ -0.11
CASC4-201ENST00000299957 A0A1B0GUA9 196 aa14.37□□□□□ -0.11
CASC4-201ENST00000299957 MED24O75448 989 aa14.37□□□□□ -0.11
CASC4-201ENST00000299957 GUCY2CP25092 1073 aa14.37□□□□□ -0.11
CASC4-201ENST00000299957 MCTP2Q6DN12 878 aa14.37□□□□□ -0.11
CASC4-201ENST00000299957 CREG2Q8IUH2 290 aa14.37□□□□□ -0.11
CASC4-201ENST00000299957 EIF2AK1Q9BQI3 630 aaKnown RBP14.37□□□□□ -0.11
CASC4-201ENST00000299957 KLHL14Q9P2G3 628 aa14.37□□□□□ -0.11
CASC4-201ENST00000299957 PALM3A6NDB9 673 aaPredicted RBP14.37□□□□□ -0.11
CASC4-201ENST00000299957 H0YIN7 160 aa14.37□□□□□ -0.11
CASC4-201ENST00000299957 ATF2P15336 505 aa14.37□□□□□ -0.11
CASC4-201ENST00000299957 MDH1P40925 334 aaKnown RBP14.37□□□□□ -0.11
CASC4-201ENST00000299957 ATP11AP98196 1134 aa14.37□□□□□ -0.11
CASC4-201ENST00000299957 MYCBPQ99417 103 aaPredicted RBP14.37□□□□□ -0.11
CASC4-201ENST00000299957 ALG13Q9NP73 1137 aaKnown RBP14.37□□□□□ -0.11
CASC4-201ENST00000299957 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.37□□□□□ -0.11
CASC4-201ENST00000299957 RNF14Q9UBS8 474 aa14.37□□□□□ -0.11
CASC4-201ENST00000299957 ANAPC7Q9UJX3 599 aa14.37□□□□□ -0.11
CASC4-201ENST00000299957 CORO7P57737 925 aa14.36□□□□□ -0.11
CASC4-201ENST00000299957 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.36□□□□□ -0.11
CASC4-201ENST00000299957 NLRX1Q86UT6 975 aa14.36□□□□□ -0.11
CASC4-201ENST00000299957 KIF2BQ8N4N8 673 aa14.36□□□□□ -0.11
CASC4-201ENST00000299957 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.36□□□□□ -0.11
CASC4-201ENST00000299957 PSMD1Q99460 953 aa14.36□□□□□ -0.11
CASC4-201ENST00000299957 PI4KBQ9UBF8 816 aa14.36□□□□□ -0.11
CASC4-201ENST00000299957 EMSYQ7Z589 1322 aa14.36□□□□□ -0.11
CASC4-201ENST00000299957 CYP26A1O43174 497 aa14.36□□□□□ -0.11
CASC4-201ENST00000299957 SYF2O95926 243 aaKnown RBP14.36□□□□□ -0.11
CASC4-201ENST00000299957 CRKP46108 304 aa14.36□□□□□ -0.11
CASC4-201ENST00000299957 STAT2P52630 851 aa14.36□□□□□ -0.11
CASC4-201ENST00000299957 PPP2R2AP63151 447 aa14.36□□□□□ -0.11
CASC4-201ENST00000299957 SBK1Q52WX2 424 aa14.36□□□□□ -0.11
CASC4-201ENST00000299957 CATSPER3Q86XQ3 398 aa14.36□□□□□ -0.11
CASC4-201ENST00000299957 SLC24A3Q9HC58 644 aa14.36□□□□□ -0.11
CASC4-201ENST00000299957 PASKQ96RG2 1323 aa14.36□□□□□ -0.11
CASC4-201ENST00000299957 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.36□□□□□ -0.11
CASC4-201ENST00000299957 MEFVO15553 781 aaPredicted RBP14.36□□□□□ -0.11
CASC4-201ENST00000299957 NSFP46459 744 aaKnown RBP14.36□□□□□ -0.11
CASC4-201ENST00000299957 KLHDC7AQ5VTJ3 777 aa14.36□□□□□ -0.11
CASC4-201ENST00000299957 PPP1R18Q6NYC8 613 aa14.36□□□□□ -0.11
CASC4-201ENST00000299957 IFT74Q96LB3 600 aa14.36□□□□□ -0.11
CASC4-201ENST00000299957 MAGED2Q9UNF1 606 aaPredicted RBP14.36□□□□□ -0.11
CASC4-201ENST00000299957 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.36□□□□□ -0.11
CASC4-201ENST00000299957 FAM237AA0A1B0GTK4 181 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 BBOX1O75936 387 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 ECEL1O95672 775 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 APBA3O96018 575 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 HSD17B3P37058 310 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 LIG4P49917 911 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 FUT2Q10981 343 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 LONRF1Q17RB8 773 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 CENPPQ6IPU0 288 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 SCYL2Q6P3W7 929 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 SCARA5Q6ZMJ2 495 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 CHURC1Q8WUH1 139 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 CCDC17Q96LX7 622 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 FAM167BQ9BTA0 163 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 ACP6Q9NPH0 428 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 C1orf112Q9NSG2 853 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.35□□□□□ -0.11
CASC4-201ENST00000299957 PI4K2BG5E9Z4 385 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 ZNF263O14978 683 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 KLRC4O43908 158 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 MMP10P09238 476 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 ALDH3A1P30838 453 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 IRX4P78413 519 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 MYO1EQ12965 1108 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 COG2Q14746 738 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 EAPPQ56P03 285 aaPredicted RBP14.35□□□□□ -0.11
CASC4-201ENST00000299957 PAXIP1Q6ZW49 1069 aaPredicted RBP14.35□□□□□ -0.11
CASC4-201ENST00000299957 PROM2Q8N271 834 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 TBC1D16Q8TBP0 767 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 HVCN1Q96D96 273 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 C9orf72Q96LT7 481 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 PNMA5Q96PV4 448 aa14.35□□□□□ -0.11
CASC4-201ENST00000299957 FGFBP2Q9BYJ0 223 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms