RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 RAB15P59190 212 aa6.66□□□□□ -1.34
SSX3-201ENST00000298396 CLDN10P78369 228 aa6.66□□□□□ -1.34
SSX3-201ENST00000298396 ATP2C1P98194 919 aaPredicted RBP6.66□□□□□ -1.34
SSX3-201ENST00000298396 DNM1Q05193 864 aaKnown RBP6.66□□□□□ -1.34
SSX3-201ENST00000298396 PTK7Q13308 1070 aa6.66□□□□□ -1.34
SSX3-201ENST00000298396 GNL2Q13823 731 aaKnown RBP6.66□□□□□ -1.34
SSX3-201ENST00000298396 SF3A1Q15459 793 aaKnown RBP6.66□□□□□ -1.34
SSX3-201ENST00000298396 FSCN1Q16658 493 aaKnown RBP6.66□□□□□ -1.34
SSX3-201ENST00000298396 UGCGQ16739 394 aa6.66□□□□□ -1.34
SSX3-201ENST00000298396 FOXD4L6Q3SYB3 417 aaPredicted RBP6.66□□□□□ -1.34
SSX3-201ENST00000298396 GNPTABQ3T906 1256 aa6.66□□□□□ -1.34
SSX3-201ENST00000298396 OXLD1Q5BKU9 147 aa6.66□□□□□ -1.34
SSX3-201ENST00000298396 RILPL1Q5EBL4 403 aa6.66□□□□□ -1.34
SSX3-201ENST00000298396 METTL7BQ6UX53 244 aa6.66□□□□□ -1.34
SSX3-201ENST00000298396 ABHD15Q6UXT9 468 aa6.66□□□□□ -1.34
SSX3-201ENST00000298396 FOXD4L3Q6VB84 417 aaPredicted RBP6.66□□□□□ -1.34
SSX3-201ENST00000298396 CYP2U1Q7Z449 544 aa6.66□□□□□ -1.34
SSX3-201ENST00000298396 PPTC7Q8NI37 304 aa6.66□□□□□ -1.34
SSX3-201ENST00000298396 LRRC15Q8TF66 581 aa6.66□□□□□ -1.34
SSX3-201ENST00000298396 CDHR1Q96JP9 859 aa6.66□□□□□ -1.34
SSX3-201ENST00000298396 ZNF577Q9BSK1 485 aa6.66□□□□□ -1.34
SSX3-201ENST00000298396 ZSCAN16Q9H4T2 348 aaPredicted RBP6.66□□□□□ -1.34
SSX3-201ENST00000298396 CYLDQ9NQC7 956 aa6.66□□□□□ -1.34
SSX3-201ENST00000298396 XPNPEP3Q9NQH7 507 aa6.66□□□□□ -1.34
SSX3-201ENST00000298396 WRAP73Q9P2S5 460 aaPredicted RBP6.66□□□□□ -1.34
SSX3-201ENST00000298396 SLC9A2Q9UBY0 812 aa6.66□□□□□ -1.34
SSX3-201ENST00000298396 HRH3Q9Y5N1 445 aa6.66□□□□□ -1.34
SSX3-201ENST00000298396 GRIN2DO15399 1336 aa6.66□□□□□ -1.34
SSX3-201ENST00000298396 TRIP11Q15643 1979 aa6.66□□□□□ -1.34
SSX3-201ENST00000298396 IGKV6D-21A0A0A0MT36 114 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 LCE2BO14633 110 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 TBX3O15119 743 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 CAPN5O15484 640 aaPredicted RBP6.65□□□□□ -1.34
SSX3-201ENST00000298396 MAFGO15525 162 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 ZNF862O60290 1169 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 LGR5O75473 907 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 STBD1O95210 358 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 LGALS2P05162 132 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 OR52Z1P0C646 297 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 C6orf222P0C671 652 aaPredicted RBP6.65□□□□□ -1.34
SSX3-201ENST00000298396 COL6A1P12109 1028 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 ATP4AP20648 1035 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 SOX10P56693 466 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 ACTR2P61160 394 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 PURAQ00577 322 aaKnown RBP6.65□□□□□ -1.34
SSX3-201ENST00000298396 SP4Q02446 784 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 CBLBQ13191 982 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 PPP2R5CQ13362 524 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 ORC2Q13416 577 aaPredicted RBP6.65□□□□□ -1.34
SSX3-201ENST00000298396 LAMC2Q13753 1193 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 NEDD9Q14511 834 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 KCNA10Q16322 511 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 CALCRLQ16602 461 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 ECM1Q16610 540 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 PKDCCQ504Y2 493 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 LRCH2Q5VUJ6 765 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 KCNV1Q6PIU1 500 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 CCDC60Q8IWA6 550 aaPredicted RBP6.65□□□□□ -1.34
SSX3-201ENST00000298396 DHX37Q8IY37 1157 aaKnown RBP6.65□□□□□ -1.34
SSX3-201ENST00000298396 TNS4Q8IZW8 715 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 LINC00301Q8NCQ3 95 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 FAM20AQ96MK3 541 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 SPATA33Q96N06 139 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 CLIC6Q96NY7 704 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 CTAGE1Q96RT6 745 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 RIT2Q99578 217 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 C16orf70Q9BSU1 422 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 MMTAG2Q9BU76 263 aaKnown RBP6.65□□□□□ -1.34
SSX3-201ENST00000298396 VRTNQ9H8Y1 702 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 JPH1Q9HDC5 661 aaPredicted RBP6.65□□□□□ -1.34
SSX3-201ENST00000298396 NOL7Q9UMY1 257 aaKnown RBP6.65□□□□□ -1.34
SSX3-201ENST00000298396 PHF24Q9UPV7 400 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 KIAA1024Q9UPX6 916 aa6.65□□□□□ -1.34
SSX3-201ENST00000298396 ELP1O95163 1332 aa6.65□□□□□ -1.35
SSX3-201ENST00000298396 IGSF9BQ9UPX0 1349 aa6.65□□□□□ -1.35
SSX3-201ENST00000298396 MICAL3Q7RTP6 2002 aa6.64□□□□□ -1.35
SSX3-201ENST00000298396 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.64□□□□□ -1.35
SSX3-201ENST00000298396 A0A1W2PQ45 241 aaPredicted RBP6.64□□□□□ -1.35
SSX3-201ENST00000298396 A0A1W2PQY0 241 aa6.64□□□□□ -1.35
SSX3-201ENST00000298396 PP2D1A8MPX8 630 aa6.64□□□□□ -1.35
SSX3-201ENST00000298396 ZBTB42B2RXF5 422 aa6.64□□□□□ -1.35
SSX3-201ENST00000298396 HAS3O00219 553 aa6.64□□□□□ -1.35
SSX3-201ENST00000298396 CHMP2AO43633 222 aa6.64□□□□□ -1.35
SSX3-201ENST00000298396 MSCO60682 206 aa6.64□□□□□ -1.35
SSX3-201ENST00000298396 GAS7O60861 476 aa6.64□□□□□ -1.35
SSX3-201ENST00000298396 ASGR1P07306 291 aa6.64□□□□□ -1.35
SSX3-201ENST00000298396 SUPT20HL2P0C7V6 817 aa6.64□□□□□ -1.35
SSX3-201ENST00000298396 SPATA31C1P0DKV0 1188 aa6.64□□□□□ -1.35
SSX3-201ENST00000298396 MARCKSP29966 332 aaPredicted RBP6.64□□□□□ -1.35
SSX3-201ENST00000298396 TCF7P36402 384 aaPredicted RBP6.64□□□□□ -1.35
SSX3-201ENST00000298396 PRPHP41219 470 aa6.64□□□□□ -1.35
SSX3-201ENST00000298396 TXKP42681 527 aa6.64□□□□□ -1.35
SSX3-201ENST00000298396 ATP1A2P50993 1020 aa6.64□□□□□ -1.35
SSX3-201ENST00000298396 ACLYP53396 1101 aa6.64□□□□□ -1.35
SSX3-201ENST00000298396 PSMC6P62333 389 aa6.64□□□□□ -1.35
SSX3-201ENST00000298396 CEBPZQ03701 1054 aaKnown RBP6.64□□□□□ -1.35
SSX3-201ENST00000298396 SLC39A14Q15043 492 aa6.64□□□□□ -1.35
SSX3-201ENST00000298396 CRTC2Q53ET0 693 aaPredicted RBP6.64□□□□□ -1.35
SSX3-201ENST00000298396 GNASQ5JWF2 1037 aa6.64□□□□□ -1.35
SSX3-201ENST00000298396 AXDND1Q5T1B0 1012 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms