RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 ZKSCAN4Q969J2 545 aaPredicted RBP12.9□□□□□ -0.34
RHO-201ENST00000296271 TUFT1Q9NNX1 390 aa12.9□□□□□ -0.34
RHO-201ENST00000296271 AIPL1Q9NZN9 384 aa12.9□□□□□ -0.34
RHO-201ENST00000296271 GJA3Q9Y6H8 435 aa12.9□□□□□ -0.34
RHO-201ENST00000296271 NFKBIEO00221 500 aa12.89□□□□□ -0.35
RHO-201ENST00000296271 TBC1D12O60347 775 aa12.89□□□□□ -0.35
RHO-201ENST00000296271 KIF20AO95235 890 aa12.89□□□□□ -0.35
RHO-201ENST00000296271 ICAM1P05362 532 aa12.89□□□□□ -0.35
RHO-201ENST00000296271 TRADDQ15628 312 aa12.89□□□□□ -0.35
RHO-201ENST00000296271 MCTP2Q6DN12 878 aa12.89□□□□□ -0.35
RHO-201ENST00000296271 HDXQ7Z353 690 aa12.89□□□□□ -0.35
RHO-201ENST00000296271 FAM83AQ86UY5 434 aa12.89□□□□□ -0.35
RHO-201ENST00000296271 FAM186BQ8IYM0 893 aa12.89□□□□□ -0.35
RHO-201ENST00000296271 NOX5Q96PH1 765 aa12.89□□□□□ -0.35
RHO-201ENST00000296271 TEKT3Q9BXF9 490 aa12.89□□□□□ -0.35
RHO-201ENST00000296271 OLFML3Q9NRN5 406 aa12.89□□□□□ -0.35
RHO-201ENST00000296271 ZHX2Q9Y6X8 837 aa12.89□□□□□ -0.35
RHO-201ENST00000296271 KIF13BQ9NQT8 1826 aa12.89□□□□□ -0.35
RHO-201ENST00000296271 EPB41P11171 864 aaKnown RBP12.89□□□□□ -0.35
RHO-201ENST00000296271 HSD17B4P51659 736 aa12.89□□□□□ -0.35
RHO-201ENST00000296271 RPS6P62753 249 aaKnown RBP12.89□□□□□ -0.35
RHO-201ENST00000296271 AGBL3Q8NEM8 1001 aa12.89□□□□□ -0.35
RHO-201ENST00000296271 IQCDQ96DY2 449 aa12.89□□□□□ -0.35
RHO-201ENST00000296271 KIFC3Q9BVG8 833 aa12.89□□□□□ -0.35
RHO-201ENST00000296271 EDEM3Q9BZQ6 932 aa12.89□□□□□ -0.35
RHO-201ENST00000296271 AGPAT3Q9NRZ7 376 aa12.89□□□□□ -0.35
RHO-201ENST00000296271 VPS18Q9P253 973 aa12.89□□□□□ -0.35
RHO-201ENST00000296271 FAN1Q9Y2M0 1017 aa12.89□□□□□ -0.35
RHO-201ENST00000296271 HYOU1Q9Y4L1 999 aa12.89□□□□□ -0.35
RHO-201ENST00000296271 FRMPD4Q14CM0 1322 aa12.89□□□□□ -0.35
RHO-201ENST00000296271 ESYT3A0FGR9 886 aa12.88□□□□□ -0.35
RHO-201ENST00000296271 GRID2IPA4D2P6 1211 aa12.88□□□□□ -0.35
RHO-201ENST00000296271 ATP8B1O43520 1251 aa12.88□□□□□ -0.35
RHO-201ENST00000296271 NPEPPSP55786 919 aa12.88□□□□□ -0.35
RHO-201ENST00000296271 NAB2Q15742 525 aa12.88□□□□□ -0.35
RHO-201ENST00000296271 TKFCQ3LXA3 575 aa12.88□□□□□ -0.35
RHO-201ENST00000296271 PLA2G4FQ68DD2 849 aa12.88□□□□□ -0.35
RHO-201ENST00000296271 WDR93Q6P2C0 686 aa12.88□□□□□ -0.35
RHO-201ENST00000296271 PADI6Q6TGC4 694 aa12.88□□□□□ -0.35
RHO-201ENST00000296271 NSMFQ6X4W1 530 aa12.88□□□□□ -0.35
RHO-201ENST00000296271 MIER3Q7Z3K6 550 aa12.88□□□□□ -0.35
RHO-201ENST00000296271 FAM160B2Q86V87 743 aa12.88□□□□□ -0.35
RHO-201ENST00000296271 PALB2Q86YC2 1186 aa12.88□□□□□ -0.35
RHO-201ENST00000296271 SYTL5Q8TDW5 730 aaPredicted RBP12.88□□□□□ -0.35
RHO-201ENST00000296271 NACC1Q96RE7 527 aa12.88□□□□□ -0.35
RHO-201ENST00000296271 ARHGEF35A5YM69 484 aa12.88□□□□□ -0.35
RHO-201ENST00000296271 POTEB2H3BUK9 544 aa12.88□□□□□ -0.35
RHO-201ENST00000296271 FAM193AP78312 1265 aa12.88□□□□□ -0.35
RHO-201ENST00000296271 PRPF38AQ8NAV1 312 aaKnown RBP12.88□□□□□ -0.35
RHO-201ENST00000296271 OLIG1Q8TAK6 271 aa12.88□□□□□ -0.35
RHO-201ENST00000296271 CCDC102AQ96A19 550 aa12.88□□□□□ -0.35
RHO-201ENST00000296271 ALS2CR12Q96Q35 445 aa12.88□□□□□ -0.35
RHO-201ENST00000296271 ERLIN1O75477 346 aa12.87□□□□□ -0.35
RHO-201ENST00000296271 VCAM1P19320 739 aa12.87□□□□□ -0.35
RHO-201ENST00000296271 SP4Q02446 784 aa12.87□□□□□ -0.35
RHO-201ENST00000296271 PRKG1Q13976 671 aa12.87□□□□□ -0.35
RHO-201ENST00000296271 ARHGAP44Q17R89 818 aa12.87□□□□□ -0.35
RHO-201ENST00000296271 GBP6Q6ZN66 633 aa12.87□□□□□ -0.35
RHO-201ENST00000296271 MICALL2Q8IY33 904 aa12.87□□□□□ -0.35
RHO-201ENST00000296271 SYN2Q92777 582 aaPredicted RBP12.87□□□□□ -0.35
RHO-201ENST00000296271 ATG4CQ96DT6 458 aa12.87□□□□□ -0.35
RHO-201ENST00000296271 CBWD1Q9BRT8 395 aa12.87□□□□□ -0.35
RHO-201ENST00000296271 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.87□□□□□ -0.35
RHO-201ENST00000296271 PIM2Q9P1W9 311 aa12.87□□□□□ -0.35
RHO-201ENST00000296271 HACL1Q9UJ83 578 aa12.87□□□□□ -0.35
RHO-201ENST00000296271 ATAD5Q96QE3 1844 aa12.87□□□□□ -0.35
RHO-201ENST00000296271 GOLGA8IPA6NC78 632 aa12.87□□□□□ -0.35
RHO-201ENST00000296271 GOLGA8JA6NMD2 632 aa12.87□□□□□ -0.35
RHO-201ENST00000296271 K7ENM7 598 aa12.87□□□□□ -0.35
RHO-201ENST00000296271 DDX3XO00571 662 aaKnown RBP eCLIP12.87□□□□□ -0.35
RHO-201ENST00000296271 SLC26A4O43511 780 aa12.87□□□□□ -0.35
RHO-201ENST00000296271 CCNE2O96020 404 aa12.87□□□□□ -0.35
RHO-201ENST00000296271 GMPSP49915 693 aaPredicted RBP12.87□□□□□ -0.35
RHO-201ENST00000296271 ZNF131P52739 623 aa12.87□□□□□ -0.35
RHO-201ENST00000296271 CKAP4Q07065 602 aaKnown RBP12.87□□□□□ -0.35
RHO-201ENST00000296271 FKBP1CQ5VVH2 108 aa12.87□□□□□ -0.35
RHO-201ENST00000296271 CCNI2Q6ZMN8 369 aaPredicted RBP12.87□□□□□ -0.35
RHO-201ENST00000296271 MTMR14Q8NCE2 650 aa12.87□□□□□ -0.35
RHO-201ENST00000296271 RPAP3Q9H6T3 665 aaPredicted RBP12.87□□□□□ -0.35
RHO-201ENST00000296271 AGO4Q9HCK5 861 aaKnown RBP12.87□□□□□ -0.35
RHO-201ENST00000296271 ACP6Q9NPH0 428 aa12.87□□□□□ -0.35
RHO-201ENST00000296271 CHORDC1Q9UHD1 332 aaPredicted RBP12.87□□□□□ -0.35
RHO-201ENST00000296271 NAGPAQ9UK23 515 aa12.87□□□□□ -0.35
RHO-201ENST00000296271 ADAM21Q9UKJ8 722 aa12.87□□□□□ -0.35
RHO-201ENST00000296271 SYNPO2Q9UMS6 1093 aa12.87□□□□□ -0.35
RHO-201ENST00000296271 ZC3H4Q9UPT8 1303 aaKnown RBP12.86□□□□□ -0.35
RHO-201ENST00000296271 TESPA1A2RU30 521 aaPredicted RBP12.86□□□□□ -0.35
RHO-201ENST00000296271 GAP43P17677 238 aa12.86□□□□□ -0.35
RHO-201ENST00000296271 RPL13P26373 211 aaKnown RBP12.86□□□□□ -0.35
RHO-201ENST00000296271 FMO5P49326 533 aa12.86□□□□□ -0.35
RHO-201ENST00000296271 JAM2P57087 298 aa12.86□□□□□ -0.35
RHO-201ENST00000296271 MAP3K10Q02779 954 aa12.86□□□□□ -0.35
RHO-201ENST00000296271 CCDC181Q5TID7 509 aa12.86□□□□□ -0.35
RHO-201ENST00000296271 ALKBH5Q6P6C2 394 aaKnown RBP12.86□□□□□ -0.35
RHO-201ENST00000296271 GLYCTKQ8IVS8 523 aa12.86□□□□□ -0.35
RHO-201ENST00000296271 SYCP3Q8IZU3 236 aa12.86□□□□□ -0.35
RHO-201ENST00000296271 LNX1Q8TBB1 728 aaPredicted RBP12.86□□□□□ -0.35
RHO-201ENST00000296271 JDP2Q8WYK2 163 aa12.86□□□□□ -0.35
RHO-201ENST00000296271 DEFB129Q9H1M3 183 aa12.86□□□□□ -0.35
RHO-201ENST00000296271 TAOK3Q9H2K8 898 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms