RNA–Protein interactions for RNA: ENST00000296098.4

TRIM54-201, Transcript of tripartite motif containing 54, humanhuman

TSL 1 (best) BASIC

Gene TRIM54, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-201ENST00000296098 CREG2Q8IUH2 290 aa26.23■■□□□ 1.79
TRIM54-201ENST00000296098 SAMD3Q8N6K7 520 aa26.23■■□□□ 1.79
TRIM54-201ENST00000296098 BZW2Q9Y6E2 419 aaKnown RBP26.23■■□□□ 1.79
TRIM54-201ENST00000296098 MYH10P35580 1976 aa26.23■■□□□ 1.79
TRIM54-201ENST00000296098 NAP1L1P55209 391 aaKnown RBP26.22■■□□□ 1.79
TRIM54-201ENST00000296098 MTMR1Q13613 665 aa26.22■■□□□ 1.79
TRIM54-201ENST00000296098 SMC1AQ14683 1233 aaKnown RBP26.22■■□□□ 1.79
TRIM54-201ENST00000296098 COG2Q14746 738 aa26.22■■□□□ 1.79
TRIM54-201ENST00000296098 NAB2Q15742 525 aa26.22■■□□□ 1.79
TRIM54-201ENST00000296098 PADI6Q6TGC4 694 aa26.22■■□□□ 1.79
TRIM54-201ENST00000296098 IRF2BP2Q7Z5L9 587 aa26.22■■□□□ 1.79
TRIM54-201ENST00000296098 MICALL2Q8IY33 904 aa26.22■■□□□ 1.79
TRIM54-201ENST00000296098 AGPAT3Q9NRZ7 376 aa26.22■■□□□ 1.79
TRIM54-201ENST00000296098 ADAMTS1Q9UHI8 967 aa26.22■■□□□ 1.79
TRIM54-201ENST00000296098 TSKSQ9UJT2 592 aa26.22■■□□□ 1.79
TRIM54-201ENST00000296098 L1RE1Q9UN81 338 aa26.22■■□□□ 1.79
TRIM54-201ENST00000296098 CTDP1Q9Y5B0 961 aaPredicted RBP26.22■■□□□ 1.79
TRIM54-201ENST00000296098 MRPS9P82933 396 aaKnown RBP26.22■■□□□ 1.79
TRIM54-201ENST00000296098 NFRKBQ6P4R8 1299 aa26.22■■□□□ 1.79
TRIM54-201ENST00000296098 GOLGA5Q8TBA6 731 aa26.22■■□□□ 1.79
TRIM54-201ENST00000296098 COG1Q8WTW3 980 aa26.22■■□□□ 1.79
TRIM54-201ENST00000296098 PNMA2Q9UL42 364 aa26.22■■□□□ 1.79
TRIM54-201ENST00000296098 PARP14Q460N5 1801 aa26.22■■□□□ 1.79
TRIM54-201ENST00000296098 GMPSP49915 693 aaPredicted RBP26.21■■□□□ 1.79
TRIM54-201ENST00000296098 PTK2Q05397 1052 aa26.21■■□□□ 1.79
TRIM54-201ENST00000296098 C2orf54Q08AI8 447 aa26.21■■□□□ 1.79
TRIM54-201ENST00000296098 DAW1Q8N136 415 aa26.21■■□□□ 1.79
TRIM54-201ENST00000296098 RPAP3Q9H6T3 665 aaPredicted RBP26.21■■□□□ 1.79
TRIM54-201ENST00000296098 FRMD4BQ9Y2L6 1034 aa26.21■■□□□ 1.79
TRIM54-201ENST00000296098 ASTN2O75129 1339 aaPredicted RBP26.21■■□□□ 1.79
TRIM54-201ENST00000296098 CYP2J2P51589 502 aa26.21■■□□□ 1.79
TRIM54-201ENST00000296098 JAM2P57087 298 aa26.21■■□□□ 1.79
TRIM54-201ENST00000296098 ITIH3Q06033 890 aa26.21■■□□□ 1.79
TRIM54-201ENST00000296098 SAMD7Q7Z3H4 446 aa26.21■■□□□ 1.79
TRIM54-201ENST00000296098 DMAC2Q9NW81 257 aa26.21■■□□□ 1.79
TRIM54-201ENST00000296098 HACL1Q9UJ83 578 aa26.21■■□□□ 1.79
TRIM54-201ENST00000296098 DBR1Q9UK59 544 aaKnown RBP26.21■■□□□ 1.79
TRIM54-201ENST00000296098 ZHX2Q9Y6X8 837 aa26.21■■□□□ 1.79
TRIM54-201ENST00000296098 NCK2O43639 380 aa26.2■■□□□ 1.78
TRIM54-201ENST00000296098 ZBED4O75132 1171 aa26.2■■□□□ 1.78
TRIM54-201ENST00000296098 PPP1R37O75864 691 aa26.2■■□□□ 1.78
TRIM54-201ENST00000296098 EIF2AK2P19525 551 aaKnown RBP26.2■■□□□ 1.78
TRIM54-201ENST00000296098 OAS2P29728 719 aaKnown RBP26.2■■□□□ 1.78
TRIM54-201ENST00000296098 PRKCIP41743 596 aa26.2■■□□□ 1.78
TRIM54-201ENST00000296098 RPS6P62753 249 aaKnown RBP26.2■■□□□ 1.78
TRIM54-201ENST00000296098 KIAA0753Q2KHM9 967 aa26.2■■□□□ 1.78
TRIM54-201ENST00000296098 C10orf76Q5T2E6 689 aa26.2■■□□□ 1.78
TRIM54-201ENST00000296098 RBM46Q8TBY0 533 aaKnown RBP26.2■■□□□ 1.78
TRIM54-201ENST00000296098 TAAR1Q96RJ0 339 aa26.2■■□□□ 1.78
TRIM54-201ENST00000296098 STRA6Q9BX79 667 aa26.2■■□□□ 1.78
TRIM54-201ENST00000296098 TLR10Q9BXR5 811 aa26.2■■□□□ 1.78
TRIM54-201ENST00000296098 SAMM50Q9Y512 469 aa26.2■■□□□ 1.78
TRIM54-201ENST00000296098 KLRC1P26715 233 aa26.19■■□□□ 1.78
TRIM54-201ENST00000296098 PGM5Q15124 567 aa26.19■■□□□ 1.78
TRIM54-201ENST00000296098 TBC1D10BQ4KMP7 808 aaPredicted RBP26.19■■□□□ 1.78
TRIM54-201ENST00000296098 ZNF571Q7Z3V5 609 aaPredicted RBP26.19■■□□□ 1.78
TRIM54-201ENST00000296098 TBC1D22BQ9NU19 505 aa26.19■■□□□ 1.78
TRIM54-201ENST00000296098 AJAP1Q9UKB5 411 aaPredicted RBP26.19■■□□□ 1.78
TRIM54-201ENST00000296098 K7ENM7 598 aa26.19■■□□□ 1.78
TRIM54-201ENST00000296098 ANXA13P27216 316 aa26.19■■□□□ 1.78
TRIM54-201ENST00000296098 SYCP3Q8IZU3 236 aa26.19■■□□□ 1.78
TRIM54-201ENST00000296098 MSL3Q8N5Y2 521 aaKnown RBP26.19■■□□□ 1.78
TRIM54-201ENST00000296098 PACSIN1Q9BY11 444 aa26.19■■□□□ 1.78
TRIM54-201ENST00000296098 SUGCTQ9HAC7 445 aa26.19■■□□□ 1.78
TRIM54-201ENST00000296098 QARSP47897 775 aaKnown RBP26.18■■□□□ 1.78
TRIM54-201ENST00000296098 FMO5P49326 533 aa26.18■■□□□ 1.78
TRIM54-201ENST00000296098 CCDC181Q5TID7 509 aa26.18■■□□□ 1.78
TRIM54-201ENST00000296098 CCDC70Q6NSX1 233 aa26.18■■□□□ 1.78
TRIM54-201ENST00000296098 MMGT1Q8N4V1 131 aa26.18■■□□□ 1.78
TRIM54-201ENST00000296098 PALMO75781 387 aa26.17■■□□□ 1.78
TRIM54-201ENST00000296098 EIF3JO75822 258 aaKnown RBP26.17■■□□□ 1.78
TRIM54-201ENST00000296098 LYPLA2O95372 231 aa26.17■■□□□ 1.78
TRIM54-201ENST00000296098 FDX1P10109 184 aa26.17■■□□□ 1.78
TRIM54-201ENST00000296098 FAM193AP78312 1265 aa26.17■■□□□ 1.78
TRIM54-201ENST00000296098 ALCAMQ13740 583 aa26.17■■□□□ 1.78
TRIM54-201ENST00000296098 PPP2R5AQ15172 486 aa26.17■■□□□ 1.78
TRIM54-201ENST00000296098 MAP9Q49MG5 647 aa26.17■■□□□ 1.78
TRIM54-201ENST00000296098 NBPF12Q5TAG4 269 aaPredicted RBP26.17■■□□□ 1.78
TRIM54-201ENST00000296098 SLC9A9Q8IVB4 645 aa26.17■■□□□ 1.78
TRIM54-201ENST00000296098 TRERF1Q96PN7 1200 aa26.17■■□□□ 1.78
TRIM54-201ENST00000296098 PSMB7Q99436 277 aa26.17■■□□□ 1.78
TRIM54-201ENST00000296098 LARSQ9P2J5 1176 aaKnown RBP26.17■■□□□ 1.78
TRIM54-201ENST00000296098 PCDHGC5Q9Y5F6 944 aa26.17■■□□□ 1.78
TRIM54-201ENST00000296098 BTNL10A8MVZ5 291 aa26.17■■□□□ 1.78
TRIM54-201ENST00000296098 CXCR5P32302 372 aa26.17■■□□□ 1.78
TRIM54-201ENST00000296098 RARRES1P49788 294 aa26.17■■□□□ 1.78
TRIM54-201ENST00000296098 DCAF15Q66K64 600 aa26.17■■□□□ 1.78
TRIM54-201ENST00000296098 CNOT7Q9UIV1 285 aaKnown RBP26.17■■□□□ 1.78
TRIM54-201ENST00000296098 GJA3Q9Y6H8 435 aa26.17■■□□□ 1.78
TRIM54-201ENST00000296098 POLR3GO15318 223 aaPredicted RBP26.16■■□□□ 1.78
TRIM54-201ENST00000296098 MAPTP10636 758 aaKnown RBP26.16■■□□□ 1.78
TRIM54-201ENST00000296098 MYCLP12524 364 aaPredicted RBP26.16■■□□□ 1.78
TRIM54-201ENST00000296098 GPS2Q13227 327 aa26.16■■□□□ 1.78
TRIM54-201ENST00000296098 CASP8Q14790 479 aa26.16■■□□□ 1.78
TRIM54-201ENST00000296098 GJB7Q6PEY0 223 aa26.16■■□□□ 1.78
TRIM54-201ENST00000296098 RNF207Q6ZRF8 634 aa26.16■■□□□ 1.78
TRIM54-201ENST00000296098 MAEAQ7L5Y9 396 aa26.16■■□□□ 1.78
TRIM54-201ENST00000296098 CCDC43Q96MW1 224 aaKnown RBP26.16■■□□□ 1.78
TRIM54-201ENST00000296098 RMDN3Q96TC7 470 aa26.16■■□□□ 1.78
TRIM54-201ENST00000296098 PXMP2Q9NR77 195 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms