RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 TKFCQ3LXA3 575 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 SLC9C1Q4G0N8 1177 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 NBPF12Q5TAG4 269 aaPredicted RBP10.16□□□□□ -0.78
CLRN1-201ENST00000295911 SFMBT2Q5VUG0 894 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 RSRC2Q7L4I2 434 aaKnown RBP10.16□□□□□ -0.78
CLRN1-201ENST00000295911 GPIHBP1Q8IV16 184 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 CPXCR1Q8N123 301 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 SYTL5Q8TDW5 730 aaPredicted RBP10.16□□□□□ -0.78
CLRN1-201ENST00000295911 PIGOQ8TEQ8 1089 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 BAP1Q92560 729 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 LRCH3Q96II8 777 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 C12orf42Q96LP6 360 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 TRERF1Q96PN7 1200 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 TIPINQ9BVW5 301 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 ZSWIM4Q9H7M6 989 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 RAVER2Q9HCJ3 691 aaKnown RBP10.16□□□□□ -0.78
CLRN1-201ENST00000295911 AGO4Q9HCK5 861 aaKnown RBP10.16□□□□□ -0.78
CLRN1-201ENST00000295911 PLCB1Q9NQ66 1216 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 NPDC1Q9NQX5 325 aaPredicted RBP10.16□□□□□ -0.78
CLRN1-201ENST00000295911 KCNH7Q9NS40 1196 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.16□□□□□ -0.78
CLRN1-201ENST00000295911 TCEAL9Q9UHQ7 104 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 DBR1Q9UK59 544 aaKnown RBP10.16□□□□□ -0.78
CLRN1-201ENST00000295911 V9GYY5 206 aaPredicted RBP10.16□□□□□ -0.78
CLRN1-201ENST00000295911 MYH9P35579 1960 aaKnown RBP10.16□□□□□ -0.78
CLRN1-201ENST00000295911 A0A0U1RQJ8 604 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 GTPBP10A4D1E9 387 aaKnown RBP10.16□□□□□ -0.78
CLRN1-201ENST00000295911 LRRC53A6NM62 1247 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 RSPH10B2B2RC85 870 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 VWA5AO00534 786 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 MAFGO15525 162 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 AKR1B10O60218 316 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 PRPF6O94906 941 aaKnown RBP10.16□□□□□ -0.78
CLRN1-201ENST00000295911 LYPLA2O95372 231 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 AFPP02771 609 aaKnown RBP10.16□□□□□ -0.78
CLRN1-201ENST00000295911 TUBBP07437 444 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 RSPH10BP0C881 870 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 XRCC5P13010 732 aaKnown RBP10.16□□□□□ -0.78
CLRN1-201ENST00000295911 PTPRAP18433 802 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 SFNP31947 248 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 HOXD13P35453 343 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 SPP2Q13103 211 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 MTMR1Q13613 665 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 MYBPC2Q14324 1141 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 GLIPR1L2Q4G1C9 344 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 RNF207Q6ZRF8 634 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 FAM178BQ8IXR5 827 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 RDM1Q8NG50 284 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 ATRIPQ8WXE1 791 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 TATDN2Q93075 761 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 LXNQ9BS40 222 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 MKNK1Q9BUB5 465 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 LSM14BQ9BX40 385 aaKnown RBP10.16□□□□□ -0.78
CLRN1-201ENST00000295911 OGFRQ9NZT2 677 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 COL20A1Q9P218 1284 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 MYO6Q9UM54 1294 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 PCDHA13Q9Y5I0 950 aa10.16□□□□□ -0.78
CLRN1-201ENST00000295911 ANO9A1A5B4 782 aa10.15□□□□□ -0.79
CLRN1-201ENST00000295911 EPHB6O15197 1021 aa10.15□□□□□ -0.79
CLRN1-201ENST00000295911 NKRFO15226 690 aaKnown RBP eCLIP10.15□□□□□ -0.79
CLRN1-201ENST00000295911 DHX15O43143 795 aaKnown RBP10.15□□□□□ -0.79
CLRN1-201ENST00000295911 PSMC2P35998 433 aaKnown RBP10.15□□□□□ -0.79
CLRN1-201ENST00000295911 EIF4A3P38919 411 aaKnown RBP10.15□□□□□ -0.79
CLRN1-201ENST00000295911 QARSP47897 775 aaKnown RBP10.15□□□□□ -0.79
CLRN1-201ENST00000295911 JAK3P52333 1124 aa10.15□□□□□ -0.79
CLRN1-201ENST00000295911 KIF11P52732 1056 aa10.15□□□□□ -0.79
CLRN1-201ENST00000295911 CHMP4BP1P59074 171 aa10.15□□□□□ -0.79
CLRN1-201ENST00000295911 RPS6P62753 249 aaKnown RBP10.15□□□□□ -0.79
CLRN1-201ENST00000295911 RASSF7Q02833 373 aa10.15□□□□□ -0.79
CLRN1-201ENST00000295911 COG2Q14746 738 aa10.15□□□□□ -0.79
CLRN1-201ENST00000295911 PGM5Q15124 567 aa10.15□□□□□ -0.79
CLRN1-201ENST00000295911 SUPT20HL1Q3ZLR7 823 aa10.15□□□□□ -0.79
CLRN1-201ENST00000295911 MUM1L1Q5H9M0 696 aa10.15□□□□□ -0.79
CLRN1-201ENST00000295911 ARHGEF16Q5VV41 709 aa10.15□□□□□ -0.79
CLRN1-201ENST00000295911 FBXO38Q6PIJ6 1188 aa10.15□□□□□ -0.79
CLRN1-201ENST00000295911 HS2ST1Q7LGA3 356 aa10.15□□□□□ -0.79
CLRN1-201ENST00000295911 ZNF720Q7Z2F6 126 aa10.15□□□□□ -0.79
CLRN1-201ENST00000295911 LRRN4CLQ8ND94 238 aa10.15□□□□□ -0.79
CLRN1-201ENST00000295911 SLC17A8Q8NDX2 589 aa10.15□□□□□ -0.79
CLRN1-201ENST00000295911 SMCR8Q8TEV9 937 aaPredicted RBP10.15□□□□□ -0.79
CLRN1-201ENST00000295911 PURBQ96QR8 312 aaKnown RBP10.15□□□□□ -0.79
CLRN1-201ENST00000295911 WRNIP1Q96S55 665 aa10.15□□□□□ -0.79
CLRN1-201ENST00000295911 RMDN3Q96TC7 470 aa10.15□□□□□ -0.79
CLRN1-201ENST00000295911 IFIH1Q9BYX4 1025 aaKnown RBP10.15□□□□□ -0.79
CLRN1-201ENST00000295911 PXMP2Q9NR77 195 aa10.15□□□□□ -0.79
CLRN1-201ENST00000295911 AIPL1Q9NZN9 384 aa10.15□□□□□ -0.79
CLRN1-201ENST00000295911 ARHGAP20Q9P2F6 1191 aa10.15□□□□□ -0.79
CLRN1-201ENST00000295911 LARSQ9P2J5 1176 aaKnown RBP10.15□□□□□ -0.79
CLRN1-201ENST00000295911 TSR3Q9UJK0 312 aaKnown RBP10.15□□□□□ -0.79
CLRN1-201ENST00000295911 FBXL5Q9UKA1 691 aa10.15□□□□□ -0.79
CLRN1-201ENST00000295911 PNMA3Q9UL41 463 aa10.15□□□□□ -0.79
CLRN1-201ENST00000295911 ADAMTS5Q9UNA0 930 aa10.15□□□□□ -0.79
CLRN1-201ENST00000295911 SCAF8Q9UPN6 1271 aaKnown RBP10.15□□□□□ -0.79
CLRN1-201ENST00000295911 DAAM1Q9Y4D1 1078 aa10.15□□□□□ -0.79
CLRN1-201ENST00000295911 BZW2Q9Y6E2 419 aaKnown RBP10.15□□□□□ -0.79
CLRN1-201ENST00000295911 ARID2Q68CP9 1835 aa10.15□□□□□ -0.79
CLRN1-201ENST00000295911 WDR90Q96KV7 1748 aa10.14□□□□□ -0.79
CLRN1-201ENST00000295911 ASTN1O14525 1302 aa10.14□□□□□ -0.79
CLRN1-201ENST00000295911 RBAK-RBAKDNI3L0D1 243 aa10.14□□□□□ -0.79
CLRN1-201ENST00000295911 ATP2A1O14983 1001 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms