RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 TGFB3P10600 412 aa18.5■□□□□ 0.55
CPSF4-201ENST00000292476 EDNRBP24530 442 aa18.5■□□□□ 0.55
CPSF4-201ENST00000292476 QARSP47897 775 aaKnown RBP18.5■□□□□ 0.55
CPSF4-201ENST00000292476 CTU1Q7Z7A3 348 aaKnown RBP18.5■□□□□ 0.55
CPSF4-201ENST00000292476 GUF1Q8N442 669 aaKnown RBP18.5■□□□□ 0.55
CPSF4-201ENST00000292476 LXNQ9BS40 222 aa18.5■□□□□ 0.55
CPSF4-201ENST00000292476 MCOLN1Q9GZU1 580 aa18.5■□□□□ 0.55
CPSF4-201ENST00000292476 BHMT2Q9H2M3 363 aa18.5■□□□□ 0.55
CPSF4-201ENST00000292476 PKD2L1Q9P0L9 805 aa18.5■□□□□ 0.55
CPSF4-201ENST00000292476 MORF4L1Q9UBU8 362 aa18.5■□□□□ 0.55
CPSF4-201ENST00000292476 DDX39AO00148 427 aaKnown RBP18.5■□□□□ 0.55
CPSF4-201ENST00000292476 STRNO43815 780 aa18.5■□□□□ 0.55
CPSF4-201ENST00000292476 PNMA6AP0CW24 399 aaPredicted RBP18.5■□□□□ 0.55
CPSF4-201ENST00000292476 CNTN2Q02246 1040 aa18.5■□□□□ 0.55
CPSF4-201ENST00000292476 EHHADHQ08426 723 aa18.5■□□□□ 0.55
CPSF4-201ENST00000292476 TSR1Q2NL82 804 aaKnown RBP18.5■□□□□ 0.55
CPSF4-201ENST00000292476 Q3C1V9 767 aa18.5■□□□□ 0.55
CPSF4-201ENST00000292476 ABRAQ8N0Z2 381 aa18.5■□□□□ 0.55
CPSF4-201ENST00000292476 LZTFL1Q9NQ48 299 aa18.5■□□□□ 0.55
CPSF4-201ENST00000292476 PRDM4Q9UKN5 801 aa18.5■□□□□ 0.55
CPSF4-201ENST00000292476 LUC7L2Q9Y383 392 aaKnown RBP18.5■□□□□ 0.55
CPSF4-201ENST00000292476 PCDHA10Q9Y5I2 948 aa18.5■□□□□ 0.55
CPSF4-201ENST00000292476 COL4A3BPQ9Y5P4 624 aa18.5■□□□□ 0.55
CPSF4-201ENST00000292476 TBCAO75347 108 aaKnown RBP18.49■□□□□ 0.55
CPSF4-201ENST00000292476 FGFR1OPO95684 399 aaKnown RBP18.49■□□□□ 0.55
CPSF4-201ENST00000292476 KCNA2P16389 499 aa18.49■□□□□ 0.55
CPSF4-201ENST00000292476 GAP43P17677 238 aa18.49■□□□□ 0.55
CPSF4-201ENST00000292476 PSMC5P62195 406 aa18.49■□□□□ 0.55
CPSF4-201ENST00000292476 PSMC6P62333 389 aa18.49■□□□□ 0.55
CPSF4-201ENST00000292476 STK4Q13043 487 aa18.49■□□□□ 0.55
CPSF4-201ENST00000292476 MEA1Q16626 185 aa18.49■□□□□ 0.55
CPSF4-201ENST00000292476 WHAMMP3Q1A5X7 153 aa18.49■□□□□ 0.55
CPSF4-201ENST00000292476 FIGNQ5HY92 759 aa18.49■□□□□ 0.55
CPSF4-201ENST00000292476 DUSP9Q99956 384 aaKnown RBP18.49■□□□□ 0.55
CPSF4-201ENST00000292476 ARHGAP39Q9C0H5 1083 aa18.49■□□□□ 0.55
CPSF4-201ENST00000292476 DBR1Q9UK59 544 aaKnown RBP18.49■□□□□ 0.55
CPSF4-201ENST00000292476 TRIM17Q9Y577 477 aa18.49■□□□□ 0.55
CPSF4-201ENST00000292476 FRMD3A2A2Y4 597 aa18.48■□□□□ 0.55
CPSF4-201ENST00000292476 TRIM49BA6NDI0 452 aa18.48■□□□□ 0.55
CPSF4-201ENST00000292476 ATP9AO75110 1047 aa18.48■□□□□ 0.55
CPSF4-201ENST00000292476 TUBBP07437 444 aa18.48■□□□□ 0.55
CPSF4-201ENST00000292476 PSAPP07602 524 aa18.48■□□□□ 0.55
CPSF4-201ENST00000292476 ARHGAP25P42331 645 aa18.48■□□□□ 0.55
CPSF4-201ENST00000292476 PMS1P54277 932 aaKnown RBP18.48■□□□□ 0.55
CPSF4-201ENST00000292476 COASYQ13057 564 aa18.48■□□□□ 0.55
CPSF4-201ENST00000292476 BRD3Q15059 726 aa18.48■□□□□ 0.55
CPSF4-201ENST00000292476 HERC4Q5GLZ8 1057 aaPredicted RBP18.48■□□□□ 0.55
CPSF4-201ENST00000292476 ZNF569Q5MCW4 686 aa18.48■□□□□ 0.55
CPSF4-201ENST00000292476 FAM26FQ5R3K3 315 aa18.48■□□□□ 0.55
CPSF4-201ENST00000292476 WDR78Q5VTH9 848 aa18.48■□□□□ 0.55
CPSF4-201ENST00000292476 C4orf19Q8IY42 314 aa18.48■□□□□ 0.55
CPSF4-201ENST00000292476 CSGALNACT2Q8N6G5 542 aa18.48■□□□□ 0.55
CPSF4-201ENST00000292476 ATP6V0A1Q93050 837 aa18.48■□□□□ 0.55
CPSF4-201ENST00000292476 NAPGQ99747 312 aaPredicted RBP18.48■□□□□ 0.55
CPSF4-201ENST00000292476 JPH1Q9HDC5 661 aaPredicted RBP18.48■□□□□ 0.55
CPSF4-201ENST00000292476 SLC9A2Q9UBY0 812 aa18.48■□□□□ 0.55
CPSF4-201ENST00000292476 DNAJC25-GNG10A0A024R161 153 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 A0A1W2PQJ5 194 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 ARHGEF35A5YM69 484 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 SOWAHBA6NEL2 793 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 ASB14A6NK59 587 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 RGS20O76081 388 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 NDUFA10O95299 355 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 CHMP4BP1P59074 171 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 LACTBP83111 547 aaPredicted RBP18.47■□□□□ 0.55
CPSF4-201ENST00000292476 GIT2Q14161 759 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 NEDD9Q14511 834 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 ARSHQ5FYA8 562 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 ANKRD13CQ8N6S4 541 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 CCDC43Q96MW1 224 aaKnown RBP18.47■□□□□ 0.55
CPSF4-201ENST00000292476 TUBGCP2Q9BSJ2 902 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 TIPINQ9BVW5 301 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 HAUS4Q9H6D7 363 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 SLC39A2Q9NP94 309 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 SEL1LQ9UBV2 794 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 ODF2LQ9ULJ1 636 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 MAPK8IP1Q9UQF2 711 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 EPN1Q9Y6I3 576 aaPredicted RBP18.47■□□□□ 0.55
CPSF4-201ENST00000292476 IVNS1ABPQ9Y6Y0 642 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 LOXHD1Q8IVV2 1947 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 TTC26A0AVF1 554 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 CCDC151A5D8V7 595 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 COBLO75128 1261 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 CDK17Q00537 523 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 LRRC63Q05C16 580 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 TEX35Q5T0J7 233 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 RINT1Q6NUQ1 792 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 OTUD6AQ7L8S5 288 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 MYOCDQ8IZQ8 938 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 BANK1Q8NDB2 785 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 EHBP1Q8NDI1 1231 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 ACRBPQ8NEB7 543 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 PIGOQ8TEQ8 1089 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 ERGIC2Q96RQ1 377 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 TSG101Q99816 390 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 TTYH3Q9C0H2 523 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 ANKEF1Q9NU02 776 aa18.47■□□□□ 0.55
CPSF4-201ENST00000292476 PEX10O60683 326 aa18.46■□□□□ 0.55
CPSF4-201ENST00000292476 CTGFP29279 349 aa18.46■□□□□ 0.55
CPSF4-201ENST00000292476 KRT83P78385 493 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms